Rh2AG019200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
1433483 .. 1433827
345 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG019200.1

Sequence Viewer

Length: 345 bp
ATGACTACCTTGGGGGTTTCAGGGATGATATTCCAGTGTGTGTTTGAAGGAAGCCTGTCAATGCAGGACACCGAAATTGAGAGGAGGCCATACCATAAAAACTGCAATTGCGCGCTGCACAAGTCGAAAGGAGGTGCTTGCTCAAATGCTTGTCCTCAAAGGAACATTTCCTTCCCCAAGAAACAATCATGGACAGATGGCTCCTTATGCATGTCAGCTGCAACTTCCAAAGTCTCATCTCATCCAAGAAACACATCCAATAAGTCCACTGGAAACAGAGAAGTTGTGAATGGGGTTCAGTCCTTATCACATAGACAATATAAAGAAGTTTCAGAGGCTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

114

Amino Acids

12.47

Weight (kDa)

9.1

Isoelectric Point (pI)

65.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 113
AgsI TTSAA 1 cut(s) 47
AluBI AGCT 1 cut(s) 218
AluI AGCT 1 cut(s) 218
Alw26I GTCTC 1 cut(s) 238
AoxI GGCC 1 cut(s) 86
ApeKI GCWGC 2 cut(s) 115, 218
AspLEI GCGC 2 cut(s) 113, 115
BbvI GCAGC 2 cut(s) 102, 205
BccI CCATC 1 cut(s) 191
BcoDI GTCTC 1 cut(s) 238
BisI GCNGC 2 cut(s) 116, 219
BlsI GCNGC 2 cut(s) 117, 220
BmiI GGNNCC 1 cut(s) 202
BsaJI CCNNGG 1 cut(s) 9
Bse1I ACTGG 2 cut(s) 34, 274
BseDI CCNNGG 1 cut(s) 9
BseGI GGATG 3 cut(s) 30, 241, 254
BseNI ACTGG 2 cut(s) 34, 274
BsePI GCGCGC 1 cut(s) 111
BseRI GAGGAG 1 cut(s) 97
BseXI GCAGC 2 cut(s) 102, 205
BsgI GTGCAG 1 cut(s) 101
Bsh1236I CGCG 1 cut(s) 113
BshFI GGCC 1 cut(s) 88
BsmAI GTCTC 1 cut(s) 238
BsnI GGCC 1 cut(s) 88
BspANI GGCC 1 cut(s) 88
BspFNI CGCG 1 cut(s) 113
BspLI GGNNCC 1 cut(s) 202
BsrI ACTGG 2 cut(s) 34, 274
BssECI CCNNGG 1 cut(s) 9
BssHII GCGCGC 1 cut(s) 111
BssT1I CCWWGG 1 cut(s) 9
BstC8I GCNNGC 2 cut(s) 113, 139
BstF5I GGATG 3 cut(s) 30, 241, 254
BstFNI CGCG 1 cut(s) 113
BstHHI GCGC 2 cut(s) 113, 115
BstMAI GTCTC 1 cut(s) 238
BstMWI GCNNNNNNNGC 1 cut(s) 207
BstNSI RCATGY 1 cut(s) 214
BstUI CGCG 1 cut(s) 113
BstV1I GCAGC 2 cut(s) 102, 205
BsuRI GGCC 1 cut(s) 88
BtsCI GGATG 3 cut(s) 30, 241, 254
BtsIMutI CAGTG 2 cut(s) 41, 267
Cac8I GCNNGC 2 cut(s) 113, 139
CfoI GCGC 2 cut(s) 113, 115
CviAII CATG 2 cut(s) 189, 211
CviJI RGCY 5 cut(s) 54, 88, 201, 218, 338
CviKI_1 RGCY 5 cut(s) 54, 88, 201, 218, 338
Eco130I CCWWGG 1 cut(s) 9
EcoT14I CCWWGG 1 cut(s) 9
EcoT22I ATGCAT 1 cut(s) 212
ErhI CCWWGG 1 cut(s) 9
FaeI CATG 2 cut(s) 192, 214
FaiI YATR 7 cut(s) 91, 96, 190, 208, 212, 312, 321
FatI CATG 2 cut(s) 188, 210
Fnu4HI GCNGC 2 cut(s) 116, 219
FokI GGATG 3 cut(s) 37, 228, 241
Fsp4HI GCNGC 2 cut(s) 116, 219
GlaI GCGC 2 cut(s) 112, 114
GluI GCNGC 2 cut(s) 116, 219
HaeIII GGCC 1 cut(s) 88
HhaI GCGC 2 cut(s) 113, 115
Hin1II CATG 2 cut(s) 192, 214
Hin6I GCGC 2 cut(s) 111, 113
HinP1I GCGC 2 cut(s) 111, 113
Hpy166II GTNNAC 1 cut(s) 267
Hpy188I TCNGA 1 cut(s) 334
Hpy8I GTNNAC 1 cut(s) 267
HpyAV CCTTC 2 cut(s) 41, 181
HpyCH4V TGCA 5 cut(s) 64, 105, 118, 210, 221
HpyF10VI GCNNNNNNNGC 1 cut(s) 207
Hsp92II CATG 2 cut(s) 192, 214
HspAI GCGC 2 cut(s) 111, 113
LmnI GCTCC 1 cut(s) 206
LpnPI CCDG 5 cut(s) 6, 47, 50, 68, 255
Lsp1109I GCAGC 2 cut(s) 102, 205
MfeI CAATTG 1 cut(s) 106
MluCI AATT 2 cut(s) 75, 106
MnlI CCTC 5 cut(s) 75, 78, 125, 165, 328
Mph1103I ATGCAT 1 cut(s) 212
MspA1I CMGCKG 1 cut(s) 218
MunI CAATTG 1 cut(s) 106
MvnI CGCG 1 cut(s) 113
MwoI GCNNNNNNNGC 1 cut(s) 207
NlaIII CATG 2 cut(s) 192, 214
NlaIV GGNNCC 1 cut(s) 202
NsiI ATGCAT 1 cut(s) 212
NspI RCATGY 1 cut(s) 214
PauI GCGCGC 1 cut(s) 111
PkrI GCNGC 2 cut(s) 117, 220
PspN4I GGNNCC 1 cut(s) 202
PteI GCGCGC 1 cut(s) 111
PvuII CAGCTG 1 cut(s) 218
SatI GCNGC 2 cut(s) 116, 219
SetI ASST 3 cut(s) 11, 136, 220
Sse9I AATT 2 cut(s) 75, 106
StyI CCWWGG 1 cut(s) 9
TaqI TCGA 1 cut(s) 125
TasI AATT 2 cut(s) 75, 106
TscAI CASTG 2 cut(s) 41, 274
TseI GCWGC 2 cut(s) 115, 218
TspRI CASTG 2 cut(s) 41, 274
XceI RCATGY 1 cut(s) 214
Zsp2I ATGCAT 1 cut(s) 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.