Rh2BG018900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
1376476 .. 1376892
417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG018900.1

Sequence Viewer

Length: 417 bp
ATGTTCAATTCAGTCAAACAAACACCTACACTGCTCACTGCCTACCACAAACACTCATACAACATCTTCAGTTTAAGAGAAGAAGCTAAGAGAATGAATACCTTGGGAGCCTCTGGGATGATGTTTCAGTGTGTGCTTGAAGGAAGCATATCAATGCATGACACTGAGATTGAGAGAAGGCCATACCACAAAAATTGTAAATGTGCACTACACAAGTCTAAAGGAAGTGTTTGCTCCAATGCTTTCCCTCAACAAAGAAACATTTCCTTCCCCAAGAAGCAATCATGGATGGATGGTTCATTGTCCATGTCAGCAACTTCCAAATTCTGTTTACAGCAGTCTCTTCCTGGAAACTCATCTACATCCACAGTAAACAGAGAAAGCAGGAATGAGGCTCATTGCTTGTCACATAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

138

Amino Acids

15.61

Weight (kDa)

9.54

Isoelectric Point (pI)

73.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 323
AcuI CTGAAG 1 cut(s) 52
AgsI TTSAA 2 cut(s) 7, 140
AjnI CCWGG 1 cut(s) 346
AloI GAACNNNNNNTCC 2 cut(s) 280, 312
AluBI AGCT 1 cut(s) 86
AluI AGCT 1 cut(s) 86
Alw21I GWGCWC 1 cut(s) 208
Alw26I GTCTC 1 cut(s) 345
Alw44I GTGCAC 1 cut(s) 204
AoxI GGCC 1 cut(s) 179
ApaLI GTGCAC 1 cut(s) 204
ApoI RAATTY 1 cut(s) 323
Asp700I GAANNNNTTC 1 cut(s) 262
BaeGI GKGCMC 1 cut(s) 208
Bbv12I GWGCWC 1 cut(s) 208
BccI CCATC 2 cut(s) 283, 287
BciT130I CCWGG 1 cut(s) 348
BcoDI GTCTC 1 cut(s) 345
Bme1390I CCNGG 1 cut(s) 348
BmiI GGNNCC 1 cut(s) 109
BmrFI CCNGG 1 cut(s) 348
BsaJI CCNNGG 1 cut(s) 102
Bse3DI GCAATG 1 cut(s) 397
BseBI CCWGG 1 cut(s) 348
BseDI CCNNGG 1 cut(s) 102
BseGI GGATG 4 cut(s) 123, 294, 298, 362
BseMI GCAATG 1 cut(s) 397
BseMII CTCAG 1 cut(s) 156
BseSI GKGCMC 1 cut(s) 208
BshFI GGCC 1 cut(s) 181
BsiHKAI GWGCWC 1 cut(s) 208
BsmAI GTCTC 1 cut(s) 345
BsnI GGCC 1 cut(s) 181
Bsp1286I GDGCHC 1 cut(s) 208
BspANI GGCC 1 cut(s) 181
BspCNI CTCAG 1 cut(s) 157
BspLI GGNNCC 1 cut(s) 109
BsrDI GCAATG 1 cut(s) 397
BssECI CCNNGG 1 cut(s) 102
BssT1I CCWWGG 1 cut(s) 102
Bst2UI CCWGG 1 cut(s) 348
Bst4CI ACNGT 1 cut(s) 370
Bst6I CTCTTC 1 cut(s) 348
BstDEI CTNAG 2 cut(s) 87, 165
BstF5I GGATG 4 cut(s) 123, 294, 298, 362
BstMAI GTCTC 1 cut(s) 345
BstNI CCWGG 1 cut(s) 348
BstSCI CCNGG 1 cut(s) 346
BstSLI GKGCMC 1 cut(s) 208
BsuRI GGCC 1 cut(s) 181
BtsCI GGATG 4 cut(s) 123, 294, 298, 362
BtsI GCAGTG 2 cut(s) 29, 36
BtsIMutI CAGTG 4 cut(s) 29, 36, 134, 162
CspCI CAANNNNNGTGG 2 cut(s) 176, 211
CviAII CATG 3 cut(s) 158, 285, 307
CviJI RGCY 4 cut(s) 86, 110, 181, 395
CviKI_1 RGCY 4 cut(s) 86, 110, 181, 395
DdeI CTNAG 2 cut(s) 87, 165
Eam1104I CTCTTC 1 cut(s) 348
EarI CTCTTC 1 cut(s) 348
Eco130I CCWWGG 1 cut(s) 102
Eco57I CTGAAG 1 cut(s) 52
EcoRII CCWGG 1 cut(s) 346
EcoT14I CCWWGG 1 cut(s) 102
EcoT22I ATGCAT 1 cut(s) 159
ErhI CCWWGG 1 cut(s) 102
FaeI CATG 3 cut(s) 161, 288, 310
FaiI YATR 7 cut(s) 58, 149, 159, 184, 286, 308, 411
FatI CATG 3 cut(s) 157, 284, 306
FokI GGATG 4 cut(s) 130, 301, 305, 349
HaeIII GGCC 1 cut(s) 181
Hin1II CATG 3 cut(s) 161, 288, 310
Hpy166II GTNNAC 3 cut(s) 206, 332, 373
Hpy8I GTNNAC 3 cut(s) 206, 332, 373
HpyAV CCTTC 3 cut(s) 134, 171, 277
HpyCH4III ACNGT 1 cut(s) 370
HpyCH4V TGCA 2 cut(s) 157, 206
HpyF3I CTNAG 2 cut(s) 87, 165
Hsp92II CATG 3 cut(s) 161, 288, 310
LmnI GCTCC 2 cut(s) 107, 239
LpnPI CCDG 4 cut(s) 99, 333, 360, 370
MaeIII GTNAC 1 cut(s) 405
MboII GAAGA 3 cut(s) 58, 92, 335
MhlI GDGCHC 1 cut(s) 208
MluCI AATT 3 cut(s) 7, 193, 323
MnlI CCTC 3 cut(s) 121, 258, 385
Mph1103I ATGCAT 1 cut(s) 159
MroXI GAANNNNTTC 1 cut(s) 262
MseI TTAA 1 cut(s) 74
MslI CAYNNNNRTG 2 cut(s) 152, 412
MspR9I CCNGG 1 cut(s) 348
MvaI CCWGG 1 cut(s) 348
NlaIII CATG 3 cut(s) 161, 288, 310
NlaIV GGNNCC 1 cut(s) 109
NmuCI GTSAC 1 cut(s) 405
NsiI ATGCAT 1 cut(s) 159
PdmI GAANNNNTTC 1 cut(s) 262
PfoI TCCNGGA 1 cut(s) 346
Psp6I CCWGG 1 cut(s) 346
PspGI CCWGG 1 cut(s) 346
PspN4I GGNNCC 1 cut(s) 109
RseI CAYNNNNRTG 2 cut(s) 152, 412
SaqAI TTAA 1 cut(s) 74
ScrFI CCNGG 1 cut(s) 348
SduI GDGCHC 1 cut(s) 208
SetI ASST 3 cut(s) 28, 88, 104
SmiMI CAYNNNNRTG 2 cut(s) 152, 412
Sse9I AATT 3 cut(s) 7, 193, 323
StyD4I CCNGG 1 cut(s) 346
StyI CCWWGG 1 cut(s) 102
TaaI ACNGT 1 cut(s) 370
TasI AATT 3 cut(s) 7, 193, 323
Tru1I TTAA 1 cut(s) 74
Tru9I TTAA 1 cut(s) 74
TscAI CASTG 4 cut(s) 36, 43, 134, 169
TseFI GTSAC 1 cut(s) 405
Tsp45I GTSAC 1 cut(s) 405
TspDTI ATGAA 2 cut(s) 110, 288
TspRI CASTG 4 cut(s) 36, 43, 134, 169
VneI GTGCAC 1 cut(s) 204
XapI RAATTY 1 cut(s) 323
XmnI GAANNNNTTC 1 cut(s) 262
Zsp2I ATGCAT 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.