Rh2BG019200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
1387240 .. 1387572
333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG019200.1

Sequence Viewer

Length: 333 bp
ATGACTACCTTGGGAGTTTCTGGTATGATTTTCCAGTGTGTGTTTGAAGGAAGCCTCTCATTGAAGAACACGGAAATAGAGCGCAGGCCATACCATAAGAACTGCAATTGTGCCCTGCACAAGTCGAAAGGGGGTTCTTGCTCCAATGCTTGTCCTCAACAGAGGAACATTTCCTTCCCCAAGAAACAATCATGGGCAGAGGGCTCCTTATGCATGTCAGCACCAACTTCCAAAGTCTCTTCTCAGCATTCTCTTCTCATCAGTGACACATCAATGTCCTCCAATGCAGACAGAGAAAGTGCCAATGGGGCTCATATCTTGTCACAGACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

110

Amino Acids

11.87

Weight (kDa)

8.85

Isoelectric Point (pI)

70.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 47, 64
Alw26I GTCTC 1 cut(s) 241
AoxI GGCC 1 cut(s) 86
AspLEI GCGC 1 cut(s) 84
BaeGI GKGCMC 1 cut(s) 115
BanII GRGCYC 2 cut(s) 206, 313
BcoDI GTCTC 1 cut(s) 241
BglI GCCNNNNNGGC 1 cut(s) 308
BmiI GGNNCC 1 cut(s) 205
BsaJI CCNNGG 1 cut(s) 9
Bse1I ACTGG 1 cut(s) 34
BseDI CCNNGG 1 cut(s) 9
BseMII CTCAG 1 cut(s) 257
BseNI ACTGG 1 cut(s) 34
BseSI GKGCMC 1 cut(s) 115
BsgI GTGCAG 1 cut(s) 101
BshFI GGCC 1 cut(s) 88
BsmAI GTCTC 1 cut(s) 241
BsmI GAATGC 1 cut(s) 247
BsnI GGCC 1 cut(s) 88
Bsp1286I GDGCHC 3 cut(s) 115, 206, 313
BspANI GGCC 1 cut(s) 88
BspCNI CTCAG 1 cut(s) 256
BspLI GGNNCC 1 cut(s) 205
BsrI ACTGG 1 cut(s) 34
BssECI CCNNGG 1 cut(s) 9
BssT1I CCWWGG 1 cut(s) 9
Bst6I CTCTTC 2 cut(s) 244, 258
BstC8I GCNNGC 1 cut(s) 86
BstDEI CTNAG 1 cut(s) 243
BstHHI GCGC 1 cut(s) 84
BstMAI GTCTC 1 cut(s) 241
BstMWI GCNNNNNNNGC 2 cut(s) 210, 308
BstNSI RCATGY 1 cut(s) 217
BstSLI GKGCMC 1 cut(s) 115
BsuRI GGCC 1 cut(s) 88
BtsIMutI CAGTG 2 cut(s) 41, 268
Cac8I GCNNGC 1 cut(s) 86
CfoI GCGC 1 cut(s) 84
CviAII CATG 3 cut(s) 192, 214, 330
CviJI RGCY 4 cut(s) 54, 88, 204, 311
CviKI_1 RGCY 4 cut(s) 54, 88, 204, 311
DdeI CTNAG 1 cut(s) 243
Eam1104I CTCTTC 2 cut(s) 244, 258
EarI CTCTTC 2 cut(s) 244, 258
Eco130I CCWWGG 1 cut(s) 9
Eco24I GRGCYC 2 cut(s) 206, 313
EcoT14I CCWWGG 1 cut(s) 9
EcoT22I ATGCAT 1 cut(s) 215
EcoT38I GRGCYC 2 cut(s) 206, 313
ErhI CCWWGG 1 cut(s) 9
FaeI CATG 3 cut(s) 195, 217, 333
FaiI YATR 8 cut(s) 26, 91, 96, 193, 211, 215, 315, 331
FatI CATG 3 cut(s) 191, 213, 329
FriOI GRGCYC 2 cut(s) 206, 313
GlaI GCGC 1 cut(s) 83
HaeIII GGCC 1 cut(s) 88
HhaI GCGC 1 cut(s) 84
Hin1II CATG 3 cut(s) 195, 217, 333
Hin6I GCGC 1 cut(s) 82
HinP1I GCGC 1 cut(s) 82
HpyAV CCTTC 2 cut(s) 41, 184
HpyCH4V TGCA 4 cut(s) 105, 118, 213, 287
HpyF10VI GCNNNNNNNGC 2 cut(s) 210, 308
HpyF3I CTNAG 1 cut(s) 243
Hsp92II CATG 3 cut(s) 195, 217, 333
HspAI GCGC 1 cut(s) 82
LmnI GCTCC 2 cut(s) 146, 209
LpnPI CCDG 4 cut(s) 6, 47, 70, 128
MaeIII GTNAC 2 cut(s) 263, 321
MboII GAAGA 3 cut(s) 76, 231, 245
MfeI CAATTG 1 cut(s) 106
MhlI GDGCHC 3 cut(s) 115, 206, 313
MluCI AATT 1 cut(s) 106
MnlI CCTC 5 cut(s) 65, 156, 165, 193, 289
Mph1103I ATGCAT 1 cut(s) 215
MslI CAYNNNNRTG 2 cut(s) 272, 328
MunI CAATTG 1 cut(s) 106
Mva1269I GAATGC 1 cut(s) 247
MwoI GCNNNNNNNGC 2 cut(s) 210, 308
NlaIII CATG 3 cut(s) 195, 217, 333
NlaIV GGNNCC 1 cut(s) 205
NmuCI GTSAC 2 cut(s) 263, 321
NsiI ATGCAT 1 cut(s) 215
NspI RCATGY 1 cut(s) 217
PctI GAATGC 1 cut(s) 247
PspN4I GGNNCC 1 cut(s) 205
RseI CAYNNNNRTG 2 cut(s) 272, 328
SduI GDGCHC 3 cut(s) 115, 206, 313
SetI ASST 1 cut(s) 11
SmiMI CAYNNNNRTG 2 cut(s) 272, 328
Sse9I AATT 1 cut(s) 106
StyI CCWWGG 1 cut(s) 9
TaqI TCGA 1 cut(s) 125
TasI AATT 1 cut(s) 106
TscAI CASTG 2 cut(s) 41, 268
TseFI GTSAC 2 cut(s) 263, 321
Tsp45I GTSAC 2 cut(s) 263, 321
TspGWI ACGGA 1 cut(s) 86
TspRI CASTG 2 cut(s) 41, 268
XceI RCATGY 1 cut(s) 217
Zsp2I ATGCAT 1 cut(s) 215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.