Rh2AG019300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
1436191 .. 1436619
429 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG019300.1

Sequence Viewer

Length: 429 bp
ATGTTCAATTCAGTCAAACAAACACCTACACTGCTCACTGCCTACCACAAACACTCATACAGTCATACAACGTACGTCTTCAGTTTAAGAGAAGAAGCTAAGAGAATGAATACCTTGGGAGCCTCTGGGATGATGTTTCAGTGTGTGCTTGAAGGAATCATATCAATGCATGACACTGAGATTGAGAGAAGGCCATACCACAAAAATTGTAATTGTGCACTACACAAGTCTAAAGGAAGTGTTTTCTCCAATGCTTGCCCTCAGCAAAGAAACATTTCCTTCCCCAAGAAGCAATCATGGATGGATTGTTCATTGTCCATGTCAGCAACTTCCAAATTCTGTTTACAGCAGTCTCTTCCTGGAAACTCATCTACATCCACCGTAAACAGAGAAAGCATGAATGAGGCTCATTGCTTGTCACGTAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

142

Amino Acids

16.12

Weight (kDa)

9.32

Isoelectric Point (pI)

73.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 335
AcuI CTGAAG 1 cut(s) 64
AfaI GTAC 1 cut(s) 74
AgsI TTSAA 2 cut(s) 7, 152
AjnI CCWGG 1 cut(s) 358
AloI GAACNNNNNNTCC 2 cut(s) 292, 324
AluBI AGCT 1 cut(s) 98
AluI AGCT 1 cut(s) 98
Alw21I GWGCWC 1 cut(s) 220
Alw26I GTCTC 1 cut(s) 357
Alw44I GTGCAC 1 cut(s) 216
AoxI GGCC 1 cut(s) 191
ApaLI GTGCAC 1 cut(s) 216
ApoI RAATTY 1 cut(s) 335
Asp700I GAANNNNTTC 1 cut(s) 274
BaeGI GKGCMC 1 cut(s) 220
BbsI GAAGAC 1 cut(s) 70
Bbv12I GWGCWC 1 cut(s) 220
BbvCI CCTCAGC 1 cut(s) 261
BccI CCATC 1 cut(s) 295
BciT130I CCWGG 1 cut(s) 360
BcoDI GTCTC 1 cut(s) 357
Bme1390I CCNGG 1 cut(s) 360
BmiI GGNNCC 1 cut(s) 121
BmrFI CCNGG 1 cut(s) 360
BpiI GAAGAC 1 cut(s) 70
Bpu10I CCTNAGC 1 cut(s) 261
BsaAI YACGTR 1 cut(s) 422
BsaJI CCNNGG 1 cut(s) 114
Bse3DI GCAATG 1 cut(s) 409
BseBI CCWGG 1 cut(s) 360
BseDI CCNNGG 1 cut(s) 114
BseGI GGATG 3 cut(s) 135, 306, 374
BseMI GCAATG 1 cut(s) 409
BseMII CTCAG 2 cut(s) 168, 275
BseSI GKGCMC 1 cut(s) 220
BshFI GGCC 1 cut(s) 193
BsiHKAI GWGCWC 1 cut(s) 220
BsiWI CGTACG 1 cut(s) 72
BsmAI GTCTC 1 cut(s) 357
BsnI GGCC 1 cut(s) 193
Bsp1286I GDGCHC 1 cut(s) 220
BspANI GGCC 1 cut(s) 193
BspCNI CTCAG 2 cut(s) 169, 274
BspLI GGNNCC 1 cut(s) 121
BsrDI GCAATG 1 cut(s) 409
BssECI CCNNGG 1 cut(s) 114
BssT1I CCWWGG 1 cut(s) 114
Bst2UI CCWGG 1 cut(s) 360
Bst4CI ACNGT 2 cut(s) 62, 382
Bst6I CTCTTC 1 cut(s) 360
BstBAI YACGTR 1 cut(s) 422
BstC8I GCNNGC 1 cut(s) 256
BstDEI CTNAG 3 cut(s) 99, 177, 261
BstF5I GGATG 3 cut(s) 135, 306, 374
BstMAI GTCTC 1 cut(s) 357
BstNI CCWGG 1 cut(s) 360
BstSCI CCNGG 1 cut(s) 358
BstSLI GKGCMC 1 cut(s) 220
BstV2I GAAGAC 1 cut(s) 70
BsuRI GGCC 1 cut(s) 193
BtsCI GGATG 3 cut(s) 135, 306, 374
BtsI GCAGTG 2 cut(s) 29, 36
BtsIMutI CAGTG 4 cut(s) 29, 36, 146, 174
Cac8I GCNNGC 1 cut(s) 256
Csp6I GTAC 1 cut(s) 73
CspCI CAANNNNNGTGG 2 cut(s) 188, 223
CviAII CATG 4 cut(s) 170, 297, 319, 397
CviJI RGCY 4 cut(s) 98, 122, 193, 407
CviKI_1 RGCY 4 cut(s) 98, 122, 193, 407
CviQI GTAC 1 cut(s) 73
DdeI CTNAG 3 cut(s) 99, 177, 261
Eam1104I CTCTTC 1 cut(s) 360
EarI CTCTTC 1 cut(s) 360
Eco130I CCWWGG 1 cut(s) 114
Eco57I CTGAAG 1 cut(s) 64
EcoRII CCWGG 1 cut(s) 358
EcoT14I CCWWGG 1 cut(s) 114
EcoT22I ATGCAT 1 cut(s) 171
ErhI CCWWGG 1 cut(s) 114
FaeI CATG 4 cut(s) 173, 300, 322, 400
FaiI YATR 8 cut(s) 58, 66, 161, 171, 196, 298, 320, 398
FatI CATG 4 cut(s) 169, 296, 318, 396
FokI GGATG 3 cut(s) 142, 313, 361
HaeIII GGCC 1 cut(s) 193
Hin1II CATG 4 cut(s) 173, 300, 322, 400
HinfI GANTC 1 cut(s) 156
Hpy166II GTNNAC 3 cut(s) 218, 344, 385
Hpy8I GTNNAC 3 cut(s) 218, 344, 385
HpyAV CCTTC 3 cut(s) 146, 183, 289
HpyCH4III ACNGT 2 cut(s) 62, 382
HpyCH4IV ACGT 3 cut(s) 71, 75, 421
HpyCH4V TGCA 2 cut(s) 169, 218
HpyF3I CTNAG 3 cut(s) 99, 177, 261
HpySE526I ACGT 3 cut(s) 71, 75, 421
Hsp92II CATG 4 cut(s) 173, 300, 322, 400
LmnI GCTCC 1 cut(s) 119
LpnPI CCDG 3 cut(s) 111, 345, 372
MaeII ACGT 3 cut(s) 71, 75, 421
MaeIII GTNAC 1 cut(s) 417
MboII GAAGA 3 cut(s) 70, 104, 347
MhlI GDGCHC 1 cut(s) 220
MluCI AATT 4 cut(s) 7, 205, 211, 335
MnlI CCTC 3 cut(s) 133, 270, 397
Mph1103I ATGCAT 1 cut(s) 171
MroXI GAANNNNTTC 1 cut(s) 274
MseI TTAA 1 cut(s) 86
MslI CAYNNNNRTG 2 cut(s) 164, 424
MspR9I CCNGG 1 cut(s) 360
MvaI CCWGG 1 cut(s) 360
NlaIII CATG 4 cut(s) 173, 300, 322, 400
NlaIV GGNNCC 1 cut(s) 121
NmuCI GTSAC 1 cut(s) 417
NsiI ATGCAT 1 cut(s) 171
PdmI GAANNNNTTC 1 cut(s) 274
PfeI GAWTC 1 cut(s) 156
Pfl23II CGTACG 1 cut(s) 72
PfoI TCCNGGA 1 cut(s) 358
Ppu21I YACGTR 1 cut(s) 422
Psp6I CCWGG 1 cut(s) 358
PspGI CCWGG 1 cut(s) 358
PspLI CGTACG 1 cut(s) 72
PspN4I GGNNCC 1 cut(s) 121
RsaI GTAC 1 cut(s) 74
RsaNI GTAC 1 cut(s) 73
RseI CAYNNNNRTG 2 cut(s) 164, 424
SaqAI TTAA 1 cut(s) 86
ScrFI CCNGG 1 cut(s) 360
SduI GDGCHC 1 cut(s) 220
SetI ASST 6 cut(s) 28, 74, 78, 100, 116, 424
SmiMI CAYNNNNRTG 2 cut(s) 164, 424
Sse9I AATT 4 cut(s) 7, 205, 211, 335
StyD4I CCNGG 1 cut(s) 358
StyI CCWWGG 1 cut(s) 114
TaaI ACNGT 2 cut(s) 62, 382
TaiI ACGT 3 cut(s) 74, 78, 424
TasI AATT 4 cut(s) 7, 205, 211, 335
TfiI GAWTC 1 cut(s) 156
Tru1I TTAA 1 cut(s) 86
Tru9I TTAA 1 cut(s) 86
TscAI CASTG 4 cut(s) 36, 43, 146, 181
TseFI GTSAC 1 cut(s) 417
Tsp45I GTSAC 1 cut(s) 417
TspDTI ATGAA 3 cut(s) 122, 300, 413
TspRI CASTG 4 cut(s) 36, 43, 146, 181
VneI GTGCAC 1 cut(s) 216
XapI RAATTY 1 cut(s) 335
XmnI GAANNNNTTC 1 cut(s) 274
Zsp2I ATGCAT 1 cut(s) 171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.