Prupe.8G208200_v2.0.a1

Plant self-incompatibility protein S1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
19401994 .. 19402443
450 bp
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UTR
Exon/CDS
Intron
Prupe.8G208200.1

Sequence Viewer

Length: 450 bp
ATGAGCCCGATCACCAAAACCCACCTACTTGTTCTTGCTTTTGCAATAGCAATAAGCCCCATCTGGTGCTCTCCTTCATCTAATAGCGAAGTGTTTCCAGAATTCACAAACTGGCATGTCTACGTCGTCAATGGGTTGAACGACAACCAGACTATGTCGGTCCACTGTAAATCCAAAGACAATGATTTGGGCATTCAAAATCTGCCGCAAGGGGCAAATACGACATGGAGTTTCAGAACAAACTTCGTCCACTCAACTCTTTTTTGGTGCTACATAAGCAAGGCCAAGGCCCATGCTGCCCTAAAAGTCTTTTGGCAAGACATCTATCTCTTTCAGAAATGCAATTGGAAGAACTGTATTTATACAGCAAAAGATGATGGGGTTTACATAAAAGATTTTCCAAACGATTGTGATGTGTTTGCCAAGAAATGGGAAGATGGATGGCGATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

150

Amino Acids

17.24

Weight (kDa)

7.62

Isoelectric Point (pI)

27.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 429
AccI GTMKAC 1 cut(s) 120
AciI CCGC 1 cut(s) 206
AcsI RAATTY 1 cut(s) 101
AfiI CCNNNNNNNGG 1 cut(s) 429
AgsI TTSAA 2 cut(s) 139, 197
Alw21I GWGCWC 1 cut(s) 71
AoxI GGCC 2 cut(s) 282, 288
ApeKI GCWGC 1 cut(s) 296
ApoI RAATTY 1 cut(s) 101
Asp700I GAANNNNTTC 1 cut(s) 93
AspS9I GGNCC 2 cut(s) 160, 289
AsuHPI GGTGA 1 cut(s) 4
AvaII GGWCC 1 cut(s) 160
BanII GRGCYC 1 cut(s) 8
Bbv12I GWGCWC 1 cut(s) 71
BbvI GCAGC 1 cut(s) 283
BccI CCATC 4 cut(s) 68, 371, 431, 435
BisI GCNGC 2 cut(s) 206, 297
BlsI GCNGC 2 cut(s) 207, 298
Bme18I GGWCC 1 cut(s) 160
BmgT120I GGNCC 2 cut(s) 160, 289
BsaJI CCNNGG 1 cut(s) 285
Bsc4I CCNNNNNNNGG 1 cut(s) 429
Bse1I ACTGG 1 cut(s) 116
BseDI CCNNGG 1 cut(s) 285
BseGI GGATG 1 cut(s) 446
BseLI CCNNNNNNNGG 1 cut(s) 429
BseNI ACTGG 1 cut(s) 116
BseXI GCAGC 1 cut(s) 283
BshFI GGCC 2 cut(s) 284, 290
BsiHKAI GWGCWC 1 cut(s) 71
BslI CCNNNNNNNGG 1 cut(s) 429
BsmI GAATGC 1 cut(s) 192
BsnI GGCC 2 cut(s) 284, 290
Bsp1286I GDGCHC 2 cut(s) 8, 71
Bsp143I GATC 1 cut(s) 9
BspACI CCGC 1 cut(s) 206
BspANI GGCC 2 cut(s) 284, 290
BsrI ACTGG 1 cut(s) 116
BssECI CCNNGG 1 cut(s) 285
BssMI GATC 1 cut(s) 9
BssT1I CCWWGG 1 cut(s) 285
Bst4CI ACNGT 2 cut(s) 167, 356
BstF5I GGATG 1 cut(s) 446
BstKTI GATC 1 cut(s) 12
BstMBI GATC 1 cut(s) 9
BstMWI GCNNNNNNNGC 2 cut(s) 276, 296
BstNSI RCATGY 1 cut(s) 119
BstV1I GCAGC 1 cut(s) 283
BsuRI GGCC 2 cut(s) 284, 290
BtsCI GGATG 1 cut(s) 446
BtsIMutI CAGTG 1 cut(s) 163
Cfr13I GGNCC 2 cut(s) 160, 289
CviAII CATG 3 cut(s) 116, 225, 293
CviJI RGCY 4 cut(s) 6, 57, 284, 290
CviKI_1 RGCY 4 cut(s) 6, 57, 284, 290
DpnI GATC 1 cut(s) 11
DpnII GATC 1 cut(s) 9
Eco130I CCWWGG 1 cut(s) 285
Eco24I GRGCYC 1 cut(s) 8
Eco47I GGWCC 1 cut(s) 160
EcoRI GAATTC 1 cut(s) 101
EcoT14I CCWWGG 1 cut(s) 285
EcoT38I GRGCYC 1 cut(s) 8
ErhI CCWWGG 1 cut(s) 285
FaeI CATG 3 cut(s) 119, 228, 296
FaiI YATR 7 cut(s) 117, 155, 226, 275, 294, 363, 389
FatI CATG 3 cut(s) 115, 224, 292
FblI GTMKAC 1 cut(s) 120
Fnu4HI GCNGC 2 cut(s) 206, 297
FriOI GRGCYC 1 cut(s) 8
Fsp4HI GCNGC 2 cut(s) 206, 297
GluI GCNGC 2 cut(s) 206, 297
HaeIII GGCC 2 cut(s) 284, 290
Hin1II CATG 3 cut(s) 119, 228, 296
HphI GGTGA 1 cut(s) 4
Hpy166II GTNNAC 4 cut(s) 121, 163, 250, 385
Hpy188I TCNGA 2 cut(s) 236, 336
Hpy188III TCNNGA 1 cut(s) 98
Hpy8I GTNNAC 4 cut(s) 121, 163, 250, 385
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 1 cut(s) 84
HpyCH4III ACNGT 2 cut(s) 167, 356
HpyCH4IV ACGT 1 cut(s) 123
HpyCH4V TGCA 2 cut(s) 44, 342
HpyF10VI GCNNNNNNNGC 2 cut(s) 276, 296
HpySE526I ACGT 1 cut(s) 123
Hsp92II CATG 3 cut(s) 119, 228, 296
Kzo9I GATC 1 cut(s) 9
LpnPI CCDG 4 cut(s) 49, 97, 111, 161
Lsp1109I GCAGC 1 cut(s) 283
MaeII ACGT 1 cut(s) 123
MalI GATC 1 cut(s) 11
MboI GATC 1 cut(s) 9
MboII GAAGA 2 cut(s) 361, 446
MfeI CAATTG 1 cut(s) 343
MhlI GDGCHC 2 cut(s) 8, 71
MluCI AATT 2 cut(s) 101, 343
MroXI GAANNNNTTC 1 cut(s) 93
MunI CAATTG 1 cut(s) 343
Mva1269I GAATGC 1 cut(s) 192
MwoI GCNNNNNNNGC 2 cut(s) 276, 296
NdeII GATC 1 cut(s) 9
NlaIII CATG 3 cut(s) 119, 228, 296
NspI RCATGY 1 cut(s) 119
PctI GAATGC 1 cut(s) 192
PdmI GAANNNNTTC 1 cut(s) 93
PflFI GACNNNGTC 1 cut(s) 154
PflMI CCANNNNNTGG 1 cut(s) 429
PkrI GCNGC 2 cut(s) 207, 298
PspPI GGNCC 2 cut(s) 160, 289
PsyI GACNNNGTC 1 cut(s) 154
SatI GCNGC 2 cut(s) 206, 297
Sau3AI GATC 1 cut(s) 9
Sau96I GGNCC 2 cut(s) 160, 289
SduI GDGCHC 2 cut(s) 8, 71
SetI ASST 2 cut(s) 27, 126
SinI GGWCC 1 cut(s) 160
Sse9I AATT 2 cut(s) 101, 343
SsiI CCGC 1 cut(s) 206
StyI CCWWGG 1 cut(s) 285
TaaI ACNGT 2 cut(s) 167, 356
TaiI ACGT 1 cut(s) 126
TaqII GACCGA 1 cut(s) 148
TasI AATT 2 cut(s) 101, 343
TauI GCSGC 1 cut(s) 208
TscAI CASTG 1 cut(s) 170
TseI GCWGC 1 cut(s) 296
TspDTI ATGAA 1 cut(s) 66
TspRI CASTG 1 cut(s) 170
Tth111I GACNNNGTC 1 cut(s) 154
Van91I CCANNNNNTGG 1 cut(s) 429
VpaK11BI GGWCC 1 cut(s) 160
XapI RAATTY 1 cut(s) 101
XceI RCATGY 1 cut(s) 119
XmiI GTMKAC 1 cut(s) 120
XmnI GAANNNNTTC 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.