Rroxscaffold_7G00181840

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000965
Physical Location & Seq
Forward (+)
20886638 .. 20891542
4905 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00181840.1

Sequence Viewer

Length: 2127 bp
ATGAGCATCAGTATGAAGCACTCTATTGTTTTGTTAATATCTTTGGCAATACTCTCAGCCTTGAGTGGTCGTGGAAATGCTGCCGAGAACAATATCCACGTGCCGGGTGTCGACAGGTGGTACGTGCACGTCGTCAATGGACTCGGGGGAGGTAGATGGCTCTTCGTTCATTGCCAGTCCAAAGACGACGATCTCGGAACTCATGATCTAGCAACAGGGAAGGAGTTTTGGTGGACGTTCAAGACAGAGTATTTCGGGCGCACACTTTTCTGGTGCTACCTGCGGACCGACGAAGCCACCAACAAACAACATGCTACTTTTGATGCGTTTTGGCATGAGAAGCACCATTTTTGGCTTTTGGATCATTGTGGCGATGAAGAAAGGAATTGCATCTGGACTGCAAAAGATGATGGGATTTACTTGAAAATCAATTCTAAAAATGTTGATGACTTTGTTCATAAATGGGAACCAGCTCTCCTAAAATGGAAGAACAGCTTTACTTCTTCACCACCTTCTCTGAATTCATGGTCGCTCACAAACCTAAACAACCTGTGCAACTGGACTGCCATTGTCTGCAACCGCAATACCAAAACAGTTTCTGAAATTCACCTTGCAAACTTCAACATCACTGCAGCACTAACGCAGTTCAACTTCGACGAGTTTCTCAATCTCACCCATTTCAACCTCAATGGCAACAATTTCTTAGGGCCTATACCATCTGCCATTGGCAACCTCACCAAACTCACCACCTTGGACTTGGGAAACAATAACTTGGAACGAGAATTGCCTGCGGAAATGGGCAAGTTAACGGAGCTTCAGTTTCTAAGTCTCTACAGCAACAACATCAATGGTACCATTCCCTTTCAGCTGGACAATCTCAAAAGTAACTGCCTAGAGCCTGCTGATTGGTCTAAATTCTCAGGCTTTCCTGTGTTGACATTCCTTGATCTTTCTCTGAACAGTTTAGATTCAGAATTCCCAGAATTTATATCTGAATGTAGGAACTTGACATTCCTGGATTTGTCTCAAAACGCTTTGACTGGCCAAATACCAGAAGTGGTATTTACCAGTCTGTTTAAGCTTGAATATCTCAATCTCACCAATAACCATTTCCAAGGGCCAATGCCGTATAACTTTCCCAACCTTAAACACCTATATTTGGAATTGAACAACTTTAGTGGTCCAATTCCTGAAGATATAGGTCTGATATCTGGTCTTGAAATTATTGACCTGCTTACCAATTCCCTTGAAGGAAAAATCCCAACCTCTATAGGCCAACTCAAGGAGCTTCAGCGCCTTGATCTTTCATCAAATTCATTAAACTCTTCAATCCCTTCTGAGCTTGGTTCATGTACCAACCTCACTCTCTTGGCCTTGGCTGTGAACAAACTCAGTGGGGAATTGCCTCTATCCTTGTCAAAATTGACCAACTTGGTGGATTTGGGATTATCTGATAATCAATTTACTGGGCCAATTTTGCCTTCTCTGGTTTCCAATTGGACTGCAATAGCCTCTATTCAATTCCAAAACAATAGATTCAGTGGCAACATTCCAGCAGAAATTGGCCTATTGACAAATCTTAAACTCCTCTTTCTGCACAAAAATAATTTCACTGGCCGAATTCCCTCAGAGATAGGAAACTTGCAAGCTATGAAAAATTTGGATCTTTCGGGAAACCAGCTCTCCGGGCCTATTCCTATGGAATTCTGGAATCTCACTAATCTTCAGCATGTAAGGCTTTTCTCCAATAACCTCAATGGCACAATCCCCCCAGAGATTGGGAACATGACTACATTGGTTAATTTTTATGTCAACACAAACCAGTTTGAGGGGGAGCTGCCGGAGACCATTTCAAACCTCACTAACCTCGAGGGCTTTTCTGTGTTCACCAATAAGTTGTCTGGAACTATTCCTAGTGATTTTGGGAAGTATAGTCCTAAATTGCGATGTCTTAGCTTTTCGAACAACAGCTTCTCTGGAGAATTGCCACCAGAGTTGTGCAGTGGATTTTCTTTGCAACAATTCACAGTGAATGTCAACAACTTTACAGGGCCATTACCCGAGTGCTTGAGAAATTGTACTGCATTAAATAGAATCCGGGGCAATCGGACGAGAAAGATGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

708

Amino Acids

79.3

Weight (kDa)

5.55

Isoelectric Point (pI)

29.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Self-incomp_S1 PF05938 42 - 155 5.2e-25 Plant self-incompatibility protein S1
LRR_14 PF23598 220 - 295 1.4e-07 Leucine-rich repeat region
LRR_8 PF13855 223 - 282 8.5e-06 Leucine rich repeat
LRR_8 PF13855 315 - 371 3.7e-06 Leucine rich repeat
LRR_14 PF23598 381 - 484 1.6e-07 Leucine-rich repeat region
LRR_14 PF23598 519 - 627 1.3e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1868
Acc36I ACCTGC 2 cut(s) 288, 1239
Acc65I GGTACC 1 cut(s) 851
AccB1I GGYRCC 1 cut(s) 851
AccB7I CCANNNNNTGG 1 cut(s) 1778
AccI GTMKAC 1 cut(s) 111
AciI CCGC 3 cut(s) 283, 580, 791
AclWI GGATC 2 cut(s) 369, 1671
AcoI YGGCCR 2 cut(s) 1042, 1615
AcsI RAATTY 9 cut(s) 520, 603, 914, 974, 983, 1312, 1620, 1657, 1703
AcuI CTGAAG 4 cut(s) 800, 1212, 1274, 1709
AcvI CACGTG 1 cut(s) 100
AfaI GTAC 4 cut(s) 122, 853, 1354, 2080
AfiI CCNNNNNNNGG 5 cut(s) 103, 1159, 1282, 1778, 1828
AjiI CACGTC 1 cut(s) 130
AjnI CCWGG 1 cut(s) 1014
AjuI GAANNNNNNNTTGG 4 cut(s) 1094, 1126, 1465, 1497
AloI GAACNNNNNNTCC 2 cut(s) 459, 491
Alw21I GWGCWC 1 cut(s) 129
Alw26I GTCTC 3 cut(s) 833, 1029, 1838
Alw44I GTGCAC 1 cut(s) 125
AlwI GGATC 2 cut(s) 369, 1671
AlwNI CAGNNNCTG 1 cut(s) 599
Ama87I CYCGRG 3 cut(s) 143, 1868, 2060
ApaLI GTGCAC 1 cut(s) 125
ApeKI GCWGC 3 cut(s) 80, 632, 1837
ApoI RAATTY 9 cut(s) 520, 603, 914, 974, 983, 1312, 1620, 1657, 1703
Asp718I GGTACC 1 cut(s) 851
AspLEI GCGC 2 cut(s) 261, 1296
AspS9I GGNCC 7 cut(s) 285, 707, 1118, 1181, 1469, 1688, 2051
AsuC2I CCSGG 3 cut(s) 105, 1687, 2099
AsuHPI GGTGA 7 cut(s) 498, 599, 664, 727, 736, 1090, 1879
AsuII TTCGAA 1 cut(s) 1961
AvaI CYCGRG 3 cut(s) 143, 1868, 2060
AvaII GGWCC 2 cut(s) 285, 1181
BaeGI GKGCMC 1 cut(s) 129
BalI TGGCCA 1 cut(s) 1044
BanI GGYRCC 1 cut(s) 851
BbrPI CACGTG 1 cut(s) 100
Bbv12I GWGCWC 1 cut(s) 129
BbvI GCAGC 3 cut(s) 67, 644, 1824
BccI CCATC 3 cut(s) 150, 404, 724
BceAI ACGGC 1 cut(s) 1111
BciT130I CCWGG 1 cut(s) 1016
BcnI CCSGG 3 cut(s) 105, 1687, 2099
BcoDI GTCTC 3 cut(s) 833, 1029, 1838
BfaI CTAG 3 cut(s) 209, 893, 1914
BfmI CTRYAG 3 cut(s) 630, 832, 1269
BfoI RGCGCY 1 cut(s) 1297
BfuAI ACCTGC 2 cut(s) 288, 1239
BisI GCNGC 3 cut(s) 81, 633, 1838
BlsI GCNGC 3 cut(s) 82, 634, 1839
Bme1390I CCNGG 4 cut(s) 105, 1016, 1687, 2099
Bme18I GGWCC 2 cut(s) 285, 1181
BmeT110I CYCGRG 3 cut(s) 143, 1868, 2060
BmgBI CACGTC 1 cut(s) 130
BmgT120I GGNCC 7 cut(s) 285, 707, 1118, 1181, 1469, 1688, 2051
BmiI GGNNCC 2 cut(s) 468, 853
BmrFI CCNGG 4 cut(s) 105, 1016, 1687, 2099
BmrI ACTGGG 1 cut(s) 1476
BmsI GCATC 3 cut(s) 15, 313, 399
BmuI ACTGGG 1 cut(s) 1476
BpmI CTGGAG 1 cut(s) 1998
Bpu14I TTCGAA 1 cut(s) 1961
BpuEI CTTGAG 3 cut(s) 82, 1265, 2089
BpuMI CCSGG 3 cut(s) 105, 1687, 2099
BsaAI YACGTR 2 cut(s) 100, 124
BsaI GGTCTC 1 cut(s) 1838
BsaJI CCNNGG 4 cut(s) 750, 1114, 1374, 2098
BsaXI ACNNNNNCTCC 8 cut(s) 215, 245, 459, 489, 803, 833, 1667, 1697
Bsc4I CCNNNNNNNGG 5 cut(s) 103, 1159, 1282, 1778, 1828
Bse1I ACTGG 7 cut(s) 175, 563, 1045, 1068, 1471, 1618, 1822
Bse3DI GCAATG 1 cut(s) 169
BseBI CCWGG 1 cut(s) 1016
BseDI CCNNGG 4 cut(s) 750, 1114, 1374, 2098
BseLI CCNNNNNNNGG 5 cut(s) 103, 1159, 1282, 1778, 1828
BseMI GCAATG 1 cut(s) 169
BseMII CTCAG 5 cut(s) 69, 933, 1329, 1405, 1641
BseNI ACTGG 7 cut(s) 175, 563, 1045, 1068, 1471, 1618, 1822
BseRI GAGGAG 1 cut(s) 1577
BseSI GKGCMC 1 cut(s) 129
BseXI GCAGC 3 cut(s) 67, 644, 1824
BsgI GTGCAG 2 cut(s) 1580, 2020
BshNI GGYRCC 1 cut(s) 851
BsiHKAI GWGCWC 1 cut(s) 129
BsiHKCI CYCGRG 3 cut(s) 143, 1868, 2060
BsiSI CCGG 4 cut(s) 104, 1686, 1841, 2098
BslI CCNNNNNNNGG 5 cut(s) 103, 1159, 1282, 1778, 1828
BsmAI GTCTC 3 cut(s) 833, 1029, 1838
Bso31I GGTCTC 1 cut(s) 1838
BsoBI CYCGRG 3 cut(s) 143, 1868, 2060
Bsp119I TTCGAA 1 cut(s) 1961
Bsp1286I GDGCHC 1 cut(s) 129
Bsp143I GATC 6 cut(s) 190, 205, 361, 946, 1300, 1663
BspACI CCGC 3 cut(s) 283, 580, 791
BspCNI CTCAG 5 cut(s) 68, 932, 1330, 1404, 1640
BspHI TCATGA 1 cut(s) 202
BspLI GGNNCC 2 cut(s) 468, 853
BspMAI CTGCAG 1 cut(s) 634
BspMI ACCTGC 2 cut(s) 288, 1239
BspPI GGATC 2 cut(s) 369, 1671
BspQI GCTCTTC 1 cut(s) 167
BspT104I TTCGAA 1 cut(s) 1961
BspT107I GGYRCC 1 cut(s) 851
BspTNI GGTCTC 1 cut(s) 1838
BsrDI GCAATG 1 cut(s) 169
BsrI ACTGG 7 cut(s) 175, 563, 1045, 1068, 1471, 1618, 1822
BssECI CCNNGG 4 cut(s) 750, 1114, 1374, 2098
BssMI GATC 6 cut(s) 190, 205, 361, 946, 1300, 1663
BssT1I CCWWGG 3 cut(s) 750, 1114, 1374
Bst2UI CCWGG 1 cut(s) 1016
Bst4CI ACNGT 3 cut(s) 595, 962, 2029
Bst6I CTCTTC 2 cut(s) 167, 1330
BstBAI YACGTR 2 cut(s) 100, 124
BstBI TTCGAA 1 cut(s) 1961
BstC8I GCNNGC 3 cut(s) 789, 900, 1647
BstDEI CTNAG 8 cut(s) 55, 703, 824, 919, 1338, 1391, 1627, 1952
BstH2I RGCGCY 1 cut(s) 1297
BstHHI GCGC 2 cut(s) 261, 1296
BstKTI GATC 6 cut(s) 193, 208, 364, 949, 1303, 1666
BstMAI GTCTC 3 cut(s) 833, 1029, 1838
BstMBI GATC 6 cut(s) 190, 205, 361, 946, 1300, 1663
BstMWI GCNNNNNNNGC 4 cut(s) 340, 1477, 1687, 1735
BstNI CCWGG 1 cut(s) 1016
BstNSI RCATGY 2 cut(s) 314, 1733
BstSCI CCNGG 4 cut(s) 103, 1014, 1685, 2097
BstSFI CTRYAG 3 cut(s) 630, 832, 1269
BstSLI GKGCMC 1 cut(s) 129
BstV1I GCAGC 3 cut(s) 67, 644, 1824
BstX2I RGATCY 1 cut(s) 1663
BstXI CCANNNNNNTGG 1 cut(s) 1435
BstYI RGATCY 1 cut(s) 1663
BtgZI GCGATG 2 cut(s) 387, 1960
BtrI CACGTC 1 cut(s) 130
BtsI GCAGTG 2 cut(s) 627, 2008
BtsIMutI CAGTG 6 cut(s) 627, 1399, 1546, 1611, 2008, 2034
BveI ACCTGC 2 cut(s) 288, 1239
Cac8I GCNNGC 3 cut(s) 789, 900, 1647
CaiI CAGNNNCTG 1 cut(s) 599
CciI TCATGA 1 cut(s) 202
CfoI GCGC 2 cut(s) 261, 1296
Cfr13I GGNCC 7 cut(s) 285, 707, 1118, 1181, 1469, 1688, 2051
CpoI CGGWCCG 1 cut(s) 285
Csp6I GTAC 4 cut(s) 121, 852, 1353, 2079
CspCI CAANNNNNGTGG 6 cut(s) 1159, 1194, 1375, 1410, 1977, 2012
CspI CGGWCCG 1 cut(s) 285
CviAII CATG 7 cut(s) 203, 311, 335, 525, 1350, 1730, 1786
CviQI GTAC 4 cut(s) 121, 852, 1353, 2079
DdeI CTNAG 8 cut(s) 55, 703, 824, 919, 1338, 1391, 1627, 1952
DpnI GATC 6 cut(s) 192, 207, 363, 948, 1302, 1665
DpnII GATC 6 cut(s) 190, 205, 361, 946, 1300, 1663
EaeI YGGCCR 2 cut(s) 1042, 1615
Eam1104I CTCTTC 2 cut(s) 167, 1330
EarI CTCTTC 2 cut(s) 167, 1330
Eco130I CCWWGG 3 cut(s) 750, 1114, 1374
Eco31I GGTCTC 1 cut(s) 1838
Eco32I GATATC 1 cut(s) 1209
Eco47I GGWCC 2 cut(s) 285, 1181
Eco57I CTGAAG 4 cut(s) 800, 1212, 1274, 1709
Eco72I CACGTG 1 cut(s) 100
Eco88I CYCGRG 3 cut(s) 143, 1868, 2060
EcoO109I RGGNCCY 1 cut(s) 707
EcoRI GAATTC 4 cut(s) 520, 974, 1620, 1703
EcoRII CCWGG 1 cut(s) 1014
EcoRV GATATC 1 cut(s) 1209
EcoT14I CCWWGG 3 cut(s) 750, 1114, 1374
ErhI CCWWGG 3 cut(s) 750, 1114, 1374
FaeI CATG 7 cut(s) 206, 314, 338, 528, 1353, 1733, 1789
FalI AAGNNNNNCTT 2 cut(s) 479, 511
FatI CATG 7 cut(s) 202, 310, 334, 524, 1349, 1729, 1785
FblI GTMKAC 1 cut(s) 111
Fnu4HI GCNGC 3 cut(s) 81, 633, 1838
Fsp4HI GCNGC 3 cut(s) 81, 633, 1838
FspBI CTAG 3 cut(s) 209, 893, 1914
GlaI GCGC 2 cut(s) 260, 1295
GluI GCNGC 3 cut(s) 81, 633, 1838
GsuI CTGGAG 1 cut(s) 1998
HaeII RGCGCY 1 cut(s) 1297
HapII CCGG 4 cut(s) 104, 1686, 1841, 2098
HhaI GCGC 2 cut(s) 261, 1296
Hin1II CATG 7 cut(s) 206, 314, 338, 528, 1353, 1733, 1789
Hin6I GCGC 2 cut(s) 259, 1294
HinP1I GCGC 2 cut(s) 259, 1294
HincII GTYRAC 5 cut(s) 112, 807, 936, 1813, 2038
HindII GTYRAC 5 cut(s) 112, 807, 936, 1813, 2038
HindIII AAGCTT 1 cut(s) 1079
HinfI GANTC 5 cut(s) 141, 968, 1536, 1711, 2094
HpaI GTTAAC 1 cut(s) 807
HpaII CCGG 4 cut(s) 104, 1686, 1841, 2098
HphI GGTGA 7 cut(s) 498, 599, 664, 727, 736, 1090, 1879
Hpy166II GTNNAC 9 cut(s) 112, 127, 234, 807, 936, 1384, 1813, 1887, 2038
Hpy188III TCNNGA 9 cut(s) 203, 241, 394, 1190, 1217, 1671, 1708, 1902, 1977
Hpy8I GTNNAC 9 cut(s) 112, 127, 234, 807, 936, 1384, 1813, 1887, 2038
Hpy99I CGWCG 4 cut(s) 134, 191, 293, 659
HpyAV CCTTC 5 cut(s) 214, 522, 1244, 1344, 1491
HpyCH4III ACNGT 3 cut(s) 595, 962, 2029
HpyCH4IV ACGT 4 cut(s) 99, 123, 129, 236
HpyF10VI GCNNNNNNNGC 4 cut(s) 340, 1477, 1687, 1735
HpyF3I CTNAG 8 cut(s) 55, 703, 824, 919, 1338, 1391, 1627, 1952
HpySE526I ACGT 4 cut(s) 99, 123, 129, 236
Hsp92II CATG 7 cut(s) 206, 314, 338, 528, 1353, 1733, 1789
HspAI GCGC 2 cut(s) 259, 1294
KpnI GGTACC 1 cut(s) 855
KspAI GTTAAC 1 cut(s) 807
Kzo9I GATC 6 cut(s) 190, 205, 361, 946, 1300, 1663
LguI GCTCTTC 1 cut(s) 167
LmnI GCTCC 3 cut(s) 811, 1285, 1834
Lsp1109I GCAGC 3 cut(s) 67, 644, 1824
LweI GCATC 3 cut(s) 15, 313, 399
MaeI CTAG 3 cut(s) 209, 893, 1914
MaeII ACGT 4 cut(s) 99, 123, 129, 236
MaeIII GTNAC 1 cut(s) 884
MalI GATC 6 cut(s) 192, 207, 363, 948, 1302, 1665
MboI GATC 6 cut(s) 190, 205, 361, 946, 1300, 1663
MboII GAAGA 7 cut(s) 154, 389, 495, 499, 1205, 1317, 1715
MfeI CAATTG 1 cut(s) 1495
MflI RGATCY 1 cut(s) 1663
MhlI GDGCHC 1 cut(s) 129
MlsI TGGCCA 1 cut(s) 1044
MluNI TGGCCA 1 cut(s) 1044
MlyI GAGTC 1 cut(s) 135
Mox20I TGGCCA 1 cut(s) 1044
MscI TGGCCA 1 cut(s) 1044
MseI TTAA 8 cut(s) 35, 806, 1077, 1146, 1319, 1581, 1800, 2087
MslI CAYNNNNRTG 1 cut(s) 11
Msp20I TGGCCA 1 cut(s) 1044
MspA1I CMGCKG 1 cut(s) 868
MspI CCGG 4 cut(s) 104, 1686, 1841, 2098
MspR9I CCNGG 4 cut(s) 105, 1016, 1687, 2099
MunI CAATTG 1 cut(s) 1495
MvaI CCWGG 1 cut(s) 1016
MwoI GCNNNNNNNGC 4 cut(s) 340, 1477, 1687, 1735
NciI CCSGG 3 cut(s) 105, 1687, 2099
NdeII GATC 6 cut(s) 190, 205, 361, 946, 1300, 1663
NlaIII CATG 7 cut(s) 206, 314, 338, 528, 1353, 1733, 1789
NlaIV GGNNCC 2 cut(s) 468, 853
NmeAIII GCCGAG 1 cut(s) 109
NspI RCATGY 2 cut(s) 314, 1733
NspV TTCGAA 1 cut(s) 1961
PaeR7I CTCGAG 1 cut(s) 1868
PagI TCATGA 1 cut(s) 202
PciSI GCTCTTC 1 cut(s) 167
PcsI WCGNNNNNNNCGW 1 cut(s) 129
PfeI GAWTC 4 cut(s) 968, 1536, 1711, 2094
PflMI CCANNNNNTGG 1 cut(s) 1778
PfoI TCCNGGA 1 cut(s) 1014
PkrI GCNGC 3 cut(s) 82, 634, 1839
PleI GAGTC 1 cut(s) 135
PmaCI CACGTG 1 cut(s) 100
PmlI CACGTG 1 cut(s) 100
PpsI GAGTC 1 cut(s) 135
Ppu21I YACGTR 2 cut(s) 100, 124
Psp6I CCWGG 1 cut(s) 1014
PspCI CACGTG 1 cut(s) 100
PspGI CCWGG 1 cut(s) 1014
PspN4I GGNNCC 2 cut(s) 468, 853
PspPI GGNCC 7 cut(s) 285, 707, 1118, 1181, 1469, 1688, 2051
PspXI VCTCGAGB 1 cut(s) 1868
PstI CTGCAG 1 cut(s) 634
PstNI CAGNNNCTG 1 cut(s) 599
PsuI RGATCY 1 cut(s) 1663
PvuII CAGCTG 1 cut(s) 868
RsaI GTAC 4 cut(s) 122, 853, 1354, 2080
RsaNI GTAC 4 cut(s) 121, 852, 1353, 2079
RseI CAYNNNNRTG 1 cut(s) 11
Rsr2I CGGWCCG 1 cut(s) 285
RsrII CGGWCCG 1 cut(s) 285
SalI GTCGAC 1 cut(s) 110
SapI GCTCTTC 1 cut(s) 167
SaqAI TTAA 8 cut(s) 35, 806, 1077, 1146, 1319, 1581, 1800, 2087
SatI GCNGC 3 cut(s) 81, 633, 1838
Sau3AI GATC 6 cut(s) 190, 205, 361, 946, 1300, 1663
Sau96I GGNCC 7 cut(s) 285, 707, 1118, 1181, 1469, 1688, 2051
SchI GAGTC 1 cut(s) 135
ScrFI CCNGG 4 cut(s) 105, 1016, 1687, 2099
SduI GDGCHC 1 cut(s) 129
SfaNI GCATC 3 cut(s) 15, 313, 399
SfcI CTRYAG 3 cut(s) 630, 832, 1269
Sfr274I CTCGAG 1 cut(s) 1868
SfuI TTCGAA 1 cut(s) 1961
SinI GGWCC 2 cut(s) 285, 1181
SlaI CTCGAG 1 cut(s) 1868
SmiMI CAYNNNNRTG 1 cut(s) 11
SmlI CTYRAG 4 cut(s) 61, 1280, 1868, 2068
SmoI CTYRAG 4 cut(s) 61, 1280, 1868, 2068
SsiI CCGC 3 cut(s) 283, 580, 791
SspMI CTAG 3 cut(s) 209, 893, 1914
StyD4I CCNGG 4 cut(s) 103, 1014, 1685, 2097
StyI CCWWGG 3 cut(s) 750, 1114, 1374
TaaI ACNGT 3 cut(s) 595, 962, 2029
TaiI ACGT 4 cut(s) 102, 126, 132, 239
TaqI TCGA 4 cut(s) 111, 654, 1869, 1961
TaqII GACCGA 1 cut(s) 302
TatI WGTACW 1 cut(s) 2078
TfiI GAWTC 4 cut(s) 968, 1536, 1711, 2094
Tru1I TTAA 8 cut(s) 35, 806, 1077, 1146, 1319, 1581, 1800, 2087
Tru9I TTAA 8 cut(s) 35, 806, 1077, 1146, 1319, 1581, 1800, 2087
TscAI CASTG 6 cut(s) 634, 1399, 1546, 1618, 2008, 2034
TseI GCWGC 3 cut(s) 80, 632, 1837
TspDTI ATGAA 9 cut(s) 29, 158, 390, 446, 513, 1296, 1305, 1338, 1667
TspGWI ACGGA 1 cut(s) 824
TspRI CASTG 6 cut(s) 634, 1399, 1546, 1618, 2008, 2034
Van91I CCANNNNNTGG 1 cut(s) 1778
VneI GTGCAC 1 cut(s) 125
VpaK11BI GGWCC 2 cut(s) 285, 1181
XapI RAATTY 9 cut(s) 520, 603, 914, 974, 983, 1312, 1620, 1657, 1703
XceI RCATGY 2 cut(s) 314, 1733
XcmI CCANNNNNNNNNTGG 1 cut(s) 754
XhoI CTCGAG 1 cut(s) 1868
XmiI GTMKAC 1 cut(s) 111
XspI CTAG 3 cut(s) 209, 893, 1914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.