pycom11g02780

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
2213818 .. 2214102
285 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g02780.1

Sequence Viewer

Length: 285 bp
ATGGTACGGACGGAGACGCTCCTCCCCAAATCTCTCACTAACCTCTCAATAAAAGGCTTCCCGAATCTGAAGAAACTGAGCAGCAAGGGCTTTCAATTCCTCACCTCTCTTCAATCTCTGTGGCTCTACAATTGTCCAAAGCTAGCATCCATTCCAGAGGAGGGTCTGCCTCCTTCACTAGAGACACTGTTCATCAATGGGTGTCCAGTGCTAAAAGAGAGATGCCAACCAGGAAAAGGACGCTACTGGCACAAAATATCCCACATCCCTTCCATACAGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

95

Amino Acids

10.61

Weight (kDa)

9.67

Isoelectric Point (pI)

44.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 89
AfaI GTAC 1 cut(s) 6
AfiI CCNNNNNNNGG 2 cut(s) 161, 236
AgsI TTSAA 2 cut(s) 95, 113
AjnI CCWGG 1 cut(s) 229
AluBI AGCT 1 cut(s) 142
AluI AGCT 1 cut(s) 142
Alw26I GTCTC 2 cut(s) 8, 176
ApeKI GCWGC 1 cut(s) 81
AsuHPI GGTGA 1 cut(s) 94
AsuNHI GCTAGC 1 cut(s) 142
BbvI GCAGC 1 cut(s) 93
BciT130I CCWGG 1 cut(s) 231
BcoDI GTCTC 2 cut(s) 8, 176
BfaI CTAG 2 cut(s) 143, 179
BisI GCNGC 1 cut(s) 82
BlsI GCNGC 1 cut(s) 83
Bme1390I CCNGG 1 cut(s) 231
BmrFI CCNGG 1 cut(s) 231
BmsI GCATC 2 cut(s) 155, 212
BmtI GCTAGC 1 cut(s) 146
Bsc4I CCNNNNNNNGG 2 cut(s) 161, 236
Bse1I ACTGG 2 cut(s) 206, 251
BseBI CCWGG 1 cut(s) 231
BseGI GGATG 2 cut(s) 146, 264
BseLI CCNNNNNNNGG 2 cut(s) 161, 236
BseMII CTCAG 1 cut(s) 68
BseNI ACTGG 2 cut(s) 206, 251
BseRI GAGGAG 2 cut(s) 11, 173
BseXI GCAGC 1 cut(s) 93
BslI CCNNNNNNNGG 2 cut(s) 161, 236
BsmAI GTCTC 2 cut(s) 8, 176
BsmBI CGTCTC 1 cut(s) 8
BspCNI CTCAG 1 cut(s) 69
BspOI GCTAGC 1 cut(s) 146
BsrI ACTGG 2 cut(s) 206, 251
Bst2UI CCWGG 1 cut(s) 231
Bst4CI ACNGT 1 cut(s) 189
Bst6I CTCTTC 1 cut(s) 114
BstC8I GCNNGC 1 cut(s) 144
BstDEI CTNAG 1 cut(s) 77
BstF5I GGATG 2 cut(s) 146, 264
BstMAI GTCTC 2 cut(s) 8, 176
BstMWI GCNNNNNNNGC 1 cut(s) 87
BstNI CCWGG 1 cut(s) 231
BstSCI CCNGG 1 cut(s) 229
BstV1I GCAGC 1 cut(s) 93
BtsCI GGATG 2 cut(s) 146, 264
BtsIMutI CAGTG 2 cut(s) 185, 213
Cac8I GCNNGC 1 cut(s) 144
CseI GACGC 2 cut(s) 25, 249
Csp6I GTAC 1 cut(s) 5
CspCI CAANNNNNGTGG 2 cut(s) 101, 136
CviJI RGCY 4 cut(s) 57, 90, 124, 142
CviKI_1 RGCY 4 cut(s) 57, 90, 124, 142
CviQI GTAC 1 cut(s) 5
DdeI CTNAG 1 cut(s) 77
Eam1104I CTCTTC 1 cut(s) 114
EarI CTCTTC 1 cut(s) 114
Eco57I CTGAAG 1 cut(s) 89
EcoRII CCWGG 1 cut(s) 229
Esp3I CGTCTC 1 cut(s) 8
FaiI YATR 2 cut(s) 275, 283
Fnu4HI GCNGC 1 cut(s) 82
FokI GGATG 2 cut(s) 133, 251
Fsp4HI GCNGC 1 cut(s) 82
FspBI CTAG 2 cut(s) 143, 179
GluI GCNGC 1 cut(s) 82
HgaI GACGC 2 cut(s) 25, 249
HinfI GANTC 1 cut(s) 64
HphI GGTGA 1 cut(s) 94
Hpy188I TCNGA 1 cut(s) 69
Hpy188III TCNNGA 2 cut(s) 61, 155
HpyAV CCTTC 2 cut(s) 183, 279
HpyCH4III ACNGT 1 cut(s) 189
HpyF10VI GCNNNNNNNGC 1 cut(s) 87
HpyF3I CTNAG 1 cut(s) 77
LmnI GCTCC 1 cut(s) 24
LpnPI CCDG 5 cut(s) 168, 216, 219, 232, 243
Lsp1109I GCAGC 1 cut(s) 93
LweI GCATC 2 cut(s) 155, 212
MaeI CTAG 2 cut(s) 143, 179
MboII GAAGA 2 cut(s) 82, 101
MfeI CAATTG 1 cut(s) 130
MluCI AATT 2 cut(s) 95, 130
MnlI CCTC 7 cut(s) 32, 53, 110, 115, 151, 154, 180
MspR9I CCNGG 1 cut(s) 231
MunI CAATTG 1 cut(s) 130
MvaI CCWGG 1 cut(s) 231
MwoI GCNNNNNNNGC 1 cut(s) 87
NheI GCTAGC 1 cut(s) 142
PfeI GAWTC 1 cut(s) 64
PkrI GCNGC 1 cut(s) 83
Psp6I CCWGG 1 cut(s) 229
PspGI CCWGG 1 cut(s) 229
RsaI GTAC 1 cut(s) 6
RsaNI GTAC 1 cut(s) 5
SatI GCNGC 1 cut(s) 82
ScrFI CCNGG 1 cut(s) 231
SetI ASST 3 cut(s) 45, 107, 144
SfaNI GCATC 2 cut(s) 155, 212
SgeI CNNG 9 cut(s) 73, 97, 155, 167, 191, 218, 242, 243, 259
Sse9I AATT 2 cut(s) 95, 130
SspMI CTAG 2 cut(s) 143, 179
StyD4I CCNGG 1 cut(s) 229
TaaI ACNGT 1 cut(s) 189
TasI AATT 2 cut(s) 95, 130
TfiI GAWTC 1 cut(s) 64
TscAI CASTG 2 cut(s) 192, 213
TseI GCWGC 1 cut(s) 81
TspDTI ATGAA 1 cut(s) 181
TspGWI ACGGA 2 cut(s) 22, 26
TspRI CASTG 2 cut(s) 192, 213
XspI CTAG 2 cut(s) 143, 179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.