Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 186 |
| AcoI | YGGCCR | 1 cut(s) | 331 |
| AcsI | RAATTY | 2 cut(s) | 102, 127 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 216 |
| AgsI | TTSAA | 2 cut(s) | 19, 37 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 118, 150 |
| AluBI | AGCT | 1 cut(s) | 202 |
| AluI | AGCT | 1 cut(s) | 202 |
| AlwI | GGATC | 1 cut(s) | 186 |
| AoxI | GGCC | 1 cut(s) | 331 |
| ApoI | RAATTY | 2 cut(s) | 102, 127 |
| AsuHPI | GGTGA | 1 cut(s) | 235 |
| BalI | TGGCCA | 1 cut(s) | 333 |
| BccI | CCATC | 2 cut(s) | 179, 220 |
| BfaI | CTAG | 1 cut(s) | 272 |
| BmiI | GGNNCC | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 1 cut(s) | 256 |
| BsaWI | WCCGGW | 1 cut(s) | 82 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 216 |
| BseDI | CCNNGG | 1 cut(s) | 256 |
| BseGI | GGATG | 1 cut(s) | 190 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 216 |
| BshFI | GGCC | 1 cut(s) | 333 |
| BsiSI | CCGG | 1 cut(s) | 83 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 216 |
| BsnI | GGCC | 1 cut(s) | 333 |
| Bsp143I | GATC | 1 cut(s) | 191 |
| Bsp19I | CCATGG | 1 cut(s) | 256 |
| BspANI | GGCC | 1 cut(s) | 333 |
| BspLI | GGNNCC | 1 cut(s) | 81 |
| BspPI | GGATC | 1 cut(s) | 186 |
| BssECI | CCNNGG | 1 cut(s) | 256 |
| BssMI | GATC | 1 cut(s) | 191 |
| BssT1I | CCWWGG | 1 cut(s) | 256 |
| Bst6I | CTCTTC | 1 cut(s) | 141 |
| BstC8I | GCNNGC | 2 cut(s) | 51, 111 |
| BstDSI | CCRYGG | 1 cut(s) | 256 |
| BstF5I | GGATG | 1 cut(s) | 190 |
| BstKTI | GATC | 1 cut(s) | 194 |
| BstMBI | GATC | 1 cut(s) | 191 |
| BsuRI | GGCC | 1 cut(s) | 333 |
| BtgI | CCRYGG | 1 cut(s) | 256 |
| BtsCI | GGATG | 1 cut(s) | 190 |
| Cac8I | GCNNGC | 2 cut(s) | 51, 111 |
| CviAII | CATG | 3 cut(s) | 158, 257, 284 |
| CviJI | RGCY | 3 cut(s) | 70, 202, 333 |
| CviKI_1 | RGCY | 3 cut(s) | 70, 202, 333 |
| DpnI | GATC | 1 cut(s) | 193 |
| DpnII | GATC | 1 cut(s) | 191 |
| EaeI | YGGCCR | 1 cut(s) | 331 |
| Eam1104I | CTCTTC | 1 cut(s) | 141 |
| EarI | CTCTTC | 1 cut(s) | 141 |
| Eco130I | CCWWGG | 1 cut(s) | 256 |
| EcoT14I | CCWWGG | 1 cut(s) | 256 |
| ErhI | CCWWGG | 1 cut(s) | 256 |
| FaeI | CATG | 3 cut(s) | 161, 260, 287 |
| FaiI | YATR | 6 cut(s) | 61, 77, 159, 258, 285, 293 |
| FatI | CATG | 3 cut(s) | 157, 256, 283 |
| FokI | GGATG | 1 cut(s) | 197 |
| FspBI | CTAG | 1 cut(s) | 272 |
| HaeIII | GGCC | 1 cut(s) | 333 |
| HapII | CCGG | 1 cut(s) | 83 |
| Hin1II | CATG | 3 cut(s) | 161, 260, 287 |
| HinfI | GANTC | 1 cut(s) | 206 |
| HpaII | CCGG | 1 cut(s) | 83 |
| HphI | GGTGA | 1 cut(s) | 235 |
| Hpy188I | TCNGA | 1 cut(s) | 211 |
| HpyAV | CCTTC | 1 cut(s) | 43 |
| HpyCH4V | TGCA | 3 cut(s) | 53, 109, 180 |
| Hsp92II | CATG | 3 cut(s) | 161, 260, 287 |
| Kzo9I | GATC | 1 cut(s) | 191 |
| LpnPI | CCDG | 4 cut(s) | 96, 128, 188, 281 |
| MaeI | CTAG | 1 cut(s) | 272 |
| MalI | GATC | 1 cut(s) | 193 |
| MboI | GATC | 1 cut(s) | 191 |
| MboII | GAAGA | 1 cut(s) | 158 |
| MlsI | TGGCCA | 1 cut(s) | 333 |
| MluCI | AATT | 3 cut(s) | 24, 102, 127 |
| MluNI | TGGCCA | 1 cut(s) | 333 |
| MmeI | TCCRAC | 2 cut(s) | 44, 145 |
| MnlI | CCTC | 4 cut(s) | 52, 60, 142, 209 |
| Mox20I | TGGCCA | 1 cut(s) | 333 |
| MscI | TGGCCA | 1 cut(s) | 333 |
| MseI | TTAA | 1 cut(s) | 245 |
| Msp20I | TGGCCA | 1 cut(s) | 333 |
| MspI | CCGG | 1 cut(s) | 83 |
| NcoI | CCATGG | 1 cut(s) | 256 |
| NdeII | GATC | 1 cut(s) | 191 |
| NlaIII | CATG | 3 cut(s) | 161, 260, 287 |
| NlaIV | GGNNCC | 1 cut(s) | 81 |
| PfeI | GAWTC | 1 cut(s) | 206 |
| PspN4I | GGNNCC | 1 cut(s) | 81 |
| SaqAI | TTAA | 1 cut(s) | 245 |
| Sau3AI | GATC | 1 cut(s) | 191 |
| SetI | ASST | 1 cut(s) | 204 |
| Sse9I | AATT | 3 cut(s) | 24, 102, 127 |
| SspMI | CTAG | 1 cut(s) | 272 |
| StyI | CCWWGG | 1 cut(s) | 256 |
| TasI | AATT | 3 cut(s) | 24, 102, 127 |
| TfiI | GAWTC | 1 cut(s) | 206 |
| Tru1I | TTAA | 1 cut(s) | 245 |
| Tru9I | TTAA | 1 cut(s) | 245 |
| XapI | RAATTY | 2 cut(s) | 102, 127 |
| XspI | CTAG | 1 cut(s) | 272 |