RchiOBHm_Chr1g0335121

Methyltransferase-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
27293155 .. 27293601
447 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 303 bp
ATGCCCAATTTAGTTGAGACTGATGTGCGTATCGTTCCCAAAATGGGTTTTGGTTTGAATTGTGTGGGAACTGGACAAGTTGAATTTAGGCTAGAGGCTAGTGTTTTAGTGCACCCTTACTTGGTTTCAGTGGAGGTGCTAAGGGTTTCTAGGCAGTATTTTGGACCGGAAGATGGTGAGCACATCAAAGTTTATGTTAGAGATGCATTAAAAGTTGTTGATAAACTTGCTGGTGCTTGTGAGGTAGAAAATGGTTGTGACGTGGGCAATGGAAATGATATTTTGATACTAAATTTGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

100

Amino Acids

10.97

Weight (kDa)

4.85

Isoelectric Point (pI)

21.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 83, 292
AfiI CCNNNNNNNGG 3 cut(s) 44, 121, 173
AgsI TTSAA 2 cut(s) 58, 83
AjiI CACGTC 1 cut(s) 262
Alw21I GWGCWC 2 cut(s) 114, 183
Alw26I GTCTC 1 cut(s) 11
Alw44I GTGCAC 1 cut(s) 110
ApaLI GTGCAC 1 cut(s) 110
ApoI RAATTY 2 cut(s) 83, 292
AspS9I GGNCC 1 cut(s) 164
AsuHPI GGTGA 1 cut(s) 188
AvaII GGWCC 1 cut(s) 164
BaeGI GKGCMC 1 cut(s) 114
Bbv12I GWGCWC 2 cut(s) 114, 183
BccI CCATC 1 cut(s) 167
BcoDI GTCTC 1 cut(s) 11
BfaI CTAG 3 cut(s) 92, 99, 150
Bme18I GGWCC 1 cut(s) 164
BmgBI CACGTC 1 cut(s) 262
BmgT120I GGNCC 1 cut(s) 164
BmsI GCATC 1 cut(s) 193
Bpu10I CCTNAGC 1 cut(s) 140
BsaWI WCCGGW 1 cut(s) 166
Bsc4I CCNNNNNNNGG 3 cut(s) 44, 121, 173
Bse1I ACTGG 1 cut(s) 76
Bse3DI GCAATG 1 cut(s) 274
BseLI CCNNNNNNNGG 3 cut(s) 44, 121, 173
BseMI GCAATG 1 cut(s) 274
BseNI ACTGG 1 cut(s) 76
BseSI GKGCMC 1 cut(s) 114
BsiHKAI GWGCWC 2 cut(s) 114, 183
BsiSI CCGG 1 cut(s) 167
BslI CCNNNNNNNGG 3 cut(s) 44, 121, 173
BsmAI GTCTC 1 cut(s) 11
Bsp1286I GDGCHC 2 cut(s) 114, 183
BsrDI GCAATG 1 cut(s) 274
BsrI ACTGG 1 cut(s) 76
BstDEI CTNAG 1 cut(s) 140
BstMAI GTCTC 1 cut(s) 11
BstSLI GKGCMC 1 cut(s) 114
BtrI CACGTC 1 cut(s) 262
BtsIMutI CAGTG 1 cut(s) 135
Cfr13I GGNCC 1 cut(s) 164
CviJI RGCY 2 cut(s) 91, 98
CviKI_1 RGCY 2 cut(s) 91, 98
DdeI CTNAG 1 cut(s) 140
Eco47I GGWCC 1 cut(s) 164
EcoT22I ATGCAT 1 cut(s) 208
FaiI YATR 1 cut(s) 195
FspBI CTAG 3 cut(s) 92, 99, 150
HapII CCGG 1 cut(s) 167
HpaII CCGG 1 cut(s) 167
HphI GGTGA 1 cut(s) 188
Hpy166II GTNNAC 1 cut(s) 112
Hpy8I GTNNAC 1 cut(s) 112
HpyCH4IV ACGT 1 cut(s) 261
HpyCH4V TGCA 2 cut(s) 112, 206
HpyF3I CTNAG 1 cut(s) 140
HpySE526I ACGT 1 cut(s) 261
LpnPI CCDG 3 cut(s) 57, 180, 216
LweI GCATC 1 cut(s) 193
MaeI CTAG 3 cut(s) 92, 99, 150
MaeII ACGT 1 cut(s) 261
MaeIII GTNAC 1 cut(s) 257
MboII GAAGA 1 cut(s) 182
MhlI GDGCHC 2 cut(s) 114, 183
MluCI AATT 4 cut(s) 7, 58, 83, 292
MnlI CCTC 3 cut(s) 88, 127, 235
Mph1103I ATGCAT 1 cut(s) 208
MseI TTAA 1 cut(s) 209
MspI CCGG 1 cut(s) 167
NmuCI GTSAC 1 cut(s) 257
NsiI ATGCAT 1 cut(s) 208
PspPI GGNCC 1 cut(s) 164
SaqAI TTAA 1 cut(s) 209
Sau96I GGNCC 1 cut(s) 164
SduI GDGCHC 2 cut(s) 114, 183
SetI ASST 3 cut(s) 138, 246, 264
SfaNI GCATC 1 cut(s) 193
SinI GGWCC 1 cut(s) 164
Sse9I AATT 4 cut(s) 7, 58, 83, 292
SspMI CTAG 3 cut(s) 92, 99, 150
TaiI ACGT 1 cut(s) 264
TasI AATT 4 cut(s) 7, 58, 83, 292
Tru1I TTAA 1 cut(s) 209
Tru9I TTAA 1 cut(s) 209
TscAI CASTG 1 cut(s) 135
TseFI GTSAC 1 cut(s) 257
Tsp45I GTSAC 1 cut(s) 257
TspRI CASTG 1 cut(s) 135
VneI GTGCAC 1 cut(s) 110
VpaK11BI GGWCC 1 cut(s) 164
XapI RAATTY 2 cut(s) 83, 292
XspI CTAG 3 cut(s) 92, 99, 150
Zsp2I ATGCAT 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.