Rh1BG110500

Methyltransferase-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
19012849 .. 19013383
535 bp
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UTR
Exon/CDS
Intron
Rh1BG110500.1

Sequence Viewer

Length: 384 bp
ATGGGTTTTGGTTTCGATTGTGTGGGAATTGGACAAGTTGAATTACGGGTTGTGGGTGTGGAAGCCGATGAGGAGGTGCTAAGGCTTTCTAGGCGGTATTTTGGGCTGGACGATGGAGAGCATATCAAAGTTTGTGTTGGAGATGCATTAAAAGTTATTGATAAACTTGCTGGTGCCTGCGAGGTAGAGGTTGGTTGTGACTTGGGCAGTGATAATGATGTTGATACTAAGTTTGATGTGATTATGGTTGATTTGGATTCAAGTGATGCTAGGGATGGTCTAATTAGGAAGCATGTCCTTTTGTCAGCCGGATCAATTCTCTCTGATAATGGAATCCTAGCTATAAATGTGATTCCTCCAAGTACATCATTTTACAGGACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

127

Amino Acids

13.63

Weight (kDa)

4.38

Isoelectric Point (pI)

24.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 173
AciI CCGC 1 cut(s) 94
AclWI GGATC 1 cut(s) 319
AfaI GTAC 1 cut(s) 364
AgsI TTSAA 2 cut(s) 41, 261
AluBI AGCT 1 cut(s) 341
AluI AGCT 1 cut(s) 341
AlwI GGATC 1 cut(s) 319
BanI GGYRCC 1 cut(s) 173
BccI CCATC 2 cut(s) 107, 269
BfaI CTAG 3 cut(s) 90, 270, 338
BmiI GGNNCC 1 cut(s) 175
BmsI GCATC 2 cut(s) 133, 256
Bpu10I CCTNAGC 1 cut(s) 80
BseGI GGATG 1 cut(s) 280
BseRI GAGGAG 1 cut(s) 86
BshNI GGYRCC 1 cut(s) 173
BsiSI CCGG 1 cut(s) 309
Bsp143I GATC 1 cut(s) 311
BspACI CCGC 1 cut(s) 94
BspLI GGNNCC 1 cut(s) 175
BspPI GGATC 1 cut(s) 319
BspT107I GGYRCC 1 cut(s) 173
BssMI GATC 1 cut(s) 311
BstC8I GCNNGC 1 cut(s) 178
BstDEI CTNAG 2 cut(s) 80, 228
BstF5I GGATG 1 cut(s) 280
BstKTI GATC 1 cut(s) 314
BstMBI GATC 1 cut(s) 311
BstMWI GCNNNNNNNGC 1 cut(s) 91
BstNSI RCATGY 1 cut(s) 296
BtsCI GGATG 1 cut(s) 280
BtsI GCAGTG 1 cut(s) 214
BtsIMutI CAGTG 1 cut(s) 214
Cac8I GCNNGC 1 cut(s) 178
Csp6I GTAC 1 cut(s) 363
CviAII CATG 1 cut(s) 293
CviJI RGCY 5 cut(s) 65, 85, 106, 308, 341
CviKI_1 RGCY 5 cut(s) 65, 85, 106, 308, 341
CviQI GTAC 1 cut(s) 363
DdeI CTNAG 2 cut(s) 80, 228
DpnI GATC 1 cut(s) 313
DpnII GATC 1 cut(s) 311
EcoT22I ATGCAT 1 cut(s) 148
FaeI CATG 1 cut(s) 296
FaiI YATR 5 cut(s) 123, 245, 294, 344, 382
FatI CATG 1 cut(s) 292
FokI GGATG 1 cut(s) 287
FspBI CTAG 3 cut(s) 90, 270, 338
HapII CCGG 1 cut(s) 309
Hin1II CATG 1 cut(s) 296
HinfI GANTC 3 cut(s) 257, 333, 352
HpaII CCGG 1 cut(s) 309
Hpy188I TCNGA 1 cut(s) 325
HpyCH4V TGCA 1 cut(s) 146
HpyF10VI GCNNNNNNNGC 1 cut(s) 91
HpyF3I CTNAG 2 cut(s) 80, 228
Hsp92II CATG 1 cut(s) 296
Kzo9I GATC 1 cut(s) 311
LpnPI CCDG 5 cut(s) 92, 156, 190, 322, 361
LweI GCATC 2 cut(s) 133, 256
MaeI CTAG 3 cut(s) 90, 270, 338
MaeIII GTNAC 1 cut(s) 197
MalI GATC 1 cut(s) 313
MboI GATC 1 cut(s) 311
MluCI AATT 4 cut(s) 27, 41, 282, 315
MmeI TCCRAC 1 cut(s) 118
MnlI CCTC 5 cut(s) 64, 67, 175, 181, 366
Mph1103I ATGCAT 1 cut(s) 148
MseI TTAA 1 cut(s) 149
MspI CCGG 1 cut(s) 309
MwoI GCNNNNNNNGC 1 cut(s) 91
NdeII GATC 1 cut(s) 311
NlaIII CATG 1 cut(s) 296
NlaIV GGNNCC 1 cut(s) 175
NmuCI GTSAC 1 cut(s) 197
NsiI ATGCAT 1 cut(s) 148
NspI RCATGY 1 cut(s) 296
PfeI GAWTC 3 cut(s) 257, 333, 352
PspN4I GGNNCC 1 cut(s) 175
RsaI GTAC 1 cut(s) 364
RsaNI GTAC 1 cut(s) 363
SaqAI TTAA 1 cut(s) 149
Sau3AI GATC 1 cut(s) 311
SetI ASST 4 cut(s) 78, 186, 192, 343
SfaNI GCATC 2 cut(s) 133, 256
Sse9I AATT 4 cut(s) 27, 41, 282, 315
SsiI CCGC 1 cut(s) 94
SspMI CTAG 3 cut(s) 90, 270, 338
TaqI TCGA 1 cut(s) 15
TasI AATT 4 cut(s) 27, 41, 282, 315
TatI WGTACW 1 cut(s) 362
TfiI GAWTC 3 cut(s) 257, 333, 352
Tru1I TTAA 1 cut(s) 149
Tru9I TTAA 1 cut(s) 149
TscAI CASTG 1 cut(s) 214
TseFI GTSAC 1 cut(s) 197
Tsp45I GTSAC 1 cut(s) 197
TspRI CASTG 1 cut(s) 214
XceI RCATGY 1 cut(s) 296
XspI CTAG 3 cut(s) 90, 270, 338
Zsp2I ATGCAT 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.