Rh1AG136200

Methyltransferase-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
25841356 .. 25843617
2262 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG136200.1

Sequence Viewer

Length: 771 bp
ATGCGAATTCTTGCGAGGTTTTGGAGAAATGTGTTGCCTCTTTGGTTGGTGGTCAGGTTTCAAAGAGGGGGTTCCGAAGGCGTTTCAGATTTAAAAGCTAGAATGCCCAATTTAGTTGAGGACAGAGGATGGATGCTTCTTTACATTGAGGGACGCAGCCGAAGTGGGGTTGTGGGTGTGGAATCCGATGAGGAGGTGCTAAGGGTTTCTAGGCAGCATTTTGGACTGGAAGATGGTGAGCACATCAAAGTTTGTGTTGGAGATGAATTAAATGTTATTGATAAACTTGCTGGTGCTTGTGAGGTAGAAAATGGTAGGGATGGTCTAATTGCTCCGCCATTGGAGTTTGTTTGGAAGCATTTTCTTTTGTCCATTAGGTCAAAGGTTGTGGGTGTGGAAGCTGATGAGGAGGTGCTAAGGGTTTCTAGGCGGTATTTTGGGCTAGAAGATGGAGAGCATATCAAAATTTGTGTTGGAGATGTTTTAAAAGTTTTTGATAGACTTGCTGGTGCCTGCGAGGTAGAGGCTGGTTGTGACGTGGGCAGTGCCAATGATGTTGATACTAAATTTGATGTGATTATGGTTGATTTGGATTCAACTGATGCTAGGGATGGTCTAATTGCTCCACCATTGGAGTTTGTTAGGAAGCATGTCCTTTTGTCAGCCAGATCAATTCTCTCTGATAATGGAATCCTAGCTCTAAATGTGATTCCTCCAAATACATCAATTTACAAGACATTGATCCATGAGTTTCGAGATGTTTTTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

256

Amino Acids

28.6

Weight (kDa)

5.09

Isoelectric Point (pI)

39.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 509
AciI CCGC 2 cut(s) 335, 430
AclWI GGATC 1 cut(s) 736
AcsI RAATTY 3 cut(s) 6, 465, 566
AfiI CCNNNNNNNGG 1 cut(s) 166
AgsI TTSAA 2 cut(s) 62, 597
AjiI CACGTC 1 cut(s) 538
AluBI AGCT 3 cut(s) 98, 401, 698
AluI AGCT 3 cut(s) 98, 401, 698
Alw21I GWGCWC 1 cut(s) 243
AlwI GGATC 1 cut(s) 736
ApeKI GCWGC 2 cut(s) 156, 214
ApoI RAATTY 3 cut(s) 6, 465, 566
AsuHPI GGTGA 1 cut(s) 248
BanI GGYRCC 1 cut(s) 509
Bbv12I GWGCWC 1 cut(s) 243
BbvI GCAGC 2 cut(s) 168, 226
BccI CCATC 5 cut(s) 123, 227, 314, 443, 605
BfaI CTAG 6 cut(s) 99, 210, 426, 443, 606, 695
BisI GCNGC 2 cut(s) 157, 215
BlsI GCNGC 2 cut(s) 158, 216
BmgBI CACGTC 1 cut(s) 538
BmiI GGNNCC 2 cut(s) 73, 511
BmsI GCATC 2 cut(s) 123, 592
Bpu10I CCTNAGC 2 cut(s) 200, 416
Bsc4I CCNNNNNNNGG 1 cut(s) 166
Bse1I ACTGG 1 cut(s) 231
BseGI GGATG 4 cut(s) 134, 138, 325, 616
BseLI CCNNNNNNNGG 1 cut(s) 166
BseNI ACTGG 1 cut(s) 231
BseRI GAGGAG 2 cut(s) 206, 422
BseXI GCAGC 2 cut(s) 168, 226
BshNI GGYRCC 1 cut(s) 509
BsiHKAI GWGCWC 1 cut(s) 243
BslFI GGGAC 1 cut(s) 165
BslI CCNNNNNNNGG 1 cut(s) 166
BsmFI GGGAC 1 cut(s) 165
BsmI GAATGC 1 cut(s) 108
Bsp1286I GDGCHC 1 cut(s) 243
Bsp143I GATC 2 cut(s) 668, 741
BspACI CCGC 2 cut(s) 335, 430
BspLI GGNNCC 2 cut(s) 73, 511
BspPI GGATC 1 cut(s) 736
BspT107I GGYRCC 1 cut(s) 509
BsrI ACTGG 1 cut(s) 231
BssMI GATC 2 cut(s) 668, 741
BstC8I GCNNGC 1 cut(s) 514
BstDEI CTNAG 2 cut(s) 200, 416
BstF5I GGATG 4 cut(s) 134, 138, 325, 616
BstKTI GATC 2 cut(s) 671, 744
BstMBI GATC 2 cut(s) 668, 741
BstNSI RCATGY 1 cut(s) 653
BstV1I GCAGC 2 cut(s) 168, 226
BtrI CACGTC 1 cut(s) 538
BtsCI GGATG 4 cut(s) 134, 138, 325, 616
BtsI GCAGTG 1 cut(s) 550
BtsIMutI CAGTG 1 cut(s) 550
Cac8I GCNNGC 1 cut(s) 514
CseI GACGC 1 cut(s) 162
CspCI CAANNNNNGTGG 2 cut(s) 369, 404
CviAII CATG 2 cut(s) 650, 746
CviJI RGCY 7 cut(s) 98, 159, 401, 442, 527, 665, 698
CviKI_1 RGCY 7 cut(s) 98, 159, 401, 442, 527, 665, 698
DdeI CTNAG 2 cut(s) 200, 416
DpnI GATC 2 cut(s) 670, 743
DpnII GATC 2 cut(s) 668, 741
DraI TTTAAA 2 cut(s) 93, 486
EciI GGCGGA 1 cut(s) 324
EcoRI GAATTC 1 cut(s) 6
FaeI CATG 2 cut(s) 653, 749
FaiI YATR 5 cut(s) 459, 581, 651, 747, 769
FaqI GGGAC 1 cut(s) 165
FatI CATG 2 cut(s) 649, 745
Fnu4HI GCNGC 2 cut(s) 157, 215
FokI GGATG 4 cut(s) 141, 145, 332, 623
Fsp4HI GCNGC 2 cut(s) 157, 215
FspBI CTAG 6 cut(s) 99, 210, 426, 443, 606, 695
GluI GCNGC 2 cut(s) 157, 215
HgaI GACGC 1 cut(s) 162
Hin1II CATG 2 cut(s) 653, 749
HinfI GANTC 4 cut(s) 182, 593, 690, 709
HphI GGTGA 1 cut(s) 248
Hpy188I TCNGA 4 cut(s) 76, 88, 187, 682
Hpy188III TCNNGA 1 cut(s) 755
HpyAV CCTTC 1 cut(s) 71
HpyCH4IV ACGT 1 cut(s) 537
HpyF3I CTNAG 2 cut(s) 200, 416
HpySE526I ACGT 1 cut(s) 537
Hsp92II CATG 2 cut(s) 653, 749
Kzo9I GATC 2 cut(s) 668, 741
LmnI GCTCC 2 cut(s) 337, 628
LpnPI CCDG 7 cut(s) 40, 212, 276, 492, 513, 526, 679
Lsp1109I GCAGC 2 cut(s) 168, 226
LweI GCATC 2 cut(s) 123, 592
MaeI CTAG 6 cut(s) 99, 210, 426, 443, 606, 695
MaeII ACGT 1 cut(s) 537
MaeIII GTNAC 1 cut(s) 533
MalI GATC 2 cut(s) 670, 743
MboI GATC 2 cut(s) 668, 741
MboII GAAGA 2 cut(s) 242, 458
MhlI GDGCHC 1 cut(s) 243
MluCI AATT 9 cut(s) 6, 109, 266, 327, 465, 566, 618, 672, 726
MmeI TCCRAC 2 cut(s) 238, 454
MseI TTAA 3 cut(s) 92, 269, 485
Mva1269I GAATGC 1 cut(s) 108
NdeII GATC 2 cut(s) 668, 741
NlaIII CATG 2 cut(s) 653, 749
NlaIV GGNNCC 2 cut(s) 73, 511
NmuCI GTSAC 1 cut(s) 533
NspI RCATGY 1 cut(s) 653
PctI GAATGC 1 cut(s) 108
PfeI GAWTC 4 cut(s) 182, 593, 690, 709
PkrI GCNGC 2 cut(s) 158, 216
PspN4I GGNNCC 2 cut(s) 73, 511
SaqAI TTAA 3 cut(s) 92, 269, 485
SatI GCNGC 2 cut(s) 157, 215
Sau3AI GATC 2 cut(s) 668, 741
SduI GDGCHC 1 cut(s) 243
SfaNI GCATC 2 cut(s) 123, 592
Sse9I AATT 9 cut(s) 6, 109, 266, 327, 465, 566, 618, 672, 726
SsiI CCGC 2 cut(s) 335, 430
SspMI CTAG 6 cut(s) 99, 210, 426, 443, 606, 695
TaiI ACGT 1 cut(s) 540
TaqI TCGA 1 cut(s) 754
TasI AATT 9 cut(s) 6, 109, 266, 327, 465, 566, 618, 672, 726
TfiI GAWTC 4 cut(s) 182, 593, 690, 709
Tru1I TTAA 3 cut(s) 92, 269, 485
Tru9I TTAA 3 cut(s) 92, 269, 485
TscAI CASTG 1 cut(s) 550
TseFI GTSAC 1 cut(s) 533
TseI GCWGC 2 cut(s) 156, 214
Tsp45I GTSAC 1 cut(s) 533
TspDTI ATGAA 1 cut(s) 279
TspRI CASTG 1 cut(s) 550
XapI RAATTY 3 cut(s) 6, 465, 566
XceI RCATGY 1 cut(s) 653
XspI CTAG 6 cut(s) 99, 210, 426, 443, 606, 695
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.