Rh1DG141300

Methyltransferase-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Reverse (-)
29795991 .. 29798237
2247 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG141300.1

Sequence Viewer

Length: 747 bp
ATGCGAATTCTAGCTCTTTGGTTGGTGGTCAGGTTTCAAAGAGGGGGTTCCGAAGGCGTTTCAGATTTAAAAGCTAGAATGCCCAATTTAGTTGAGGACAGAGGATGGATGCTTCTTTACATTGAGGGACGCAGCCGAAGTGGGGTTGTGGGTGTGGAATCCGATGAGGAGGTGCTAAGGGTTTCTAGGCAGTATTTTGGACTGGAAGATGGTGAGCACATCAAAGTTTGTGTTGGAGATGAATTAAATGTTATTGATAAACTTGCTGGTGCTTGTGAGGTAGAAAATGGTAGGGATGGTCTAATTGCTCCGCCATTGGAGTTTGTTTGGAAGCATTTTCTTTTGTCCATTAGGTCAAAGGTTGTGGGTGTGGAAGCTGATGAGGAGGTGCTAAGGGTTTCTAGGCGGTATTTTGGGCTAGAAGATGGAGAGCATATCAAAATTTGTGTTGGAGATGTTTTAAAAGTTTTTGATAGACTTGCTGGTGCCTGCGAGGTAGAGGCTGGTTGTGACGTGGGCAGTGCCAATGATGTTGATACTAAATTTGATGTGATTATGGTTGATTTGGATTCAACTGATGCTAGGGATGGTCTAATTGCTCCACCATTGGAGTTTGTTAGGAAGCATGTCCTTTTGTCAGCCAGATCAATTCTCTCTGATAATGGAATCCTAGCTCTAAATGTGATTCCTCCAAATACATCAATTTACAAGACATTGATCCATGAGTTTCGAGATGTTTTTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

248

Amino Acids

27.55

Weight (kDa)

4.88

Isoelectric Point (pI)

39.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 485
AciI CCGC 2 cut(s) 311, 406
AclWI GGATC 1 cut(s) 712
AcsI RAATTY 3 cut(s) 6, 441, 542
AfiI CCNNNNNNNGG 1 cut(s) 142
AgsI TTSAA 2 cut(s) 38, 573
AjiI CACGTC 1 cut(s) 514
AluBI AGCT 4 cut(s) 14, 74, 377, 674
AluI AGCT 4 cut(s) 14, 74, 377, 674
Alw21I GWGCWC 1 cut(s) 219
AlwI GGATC 1 cut(s) 712
ApeKI GCWGC 1 cut(s) 132
ApoI RAATTY 3 cut(s) 6, 441, 542
AsuHPI GGTGA 1 cut(s) 224
BanI GGYRCC 1 cut(s) 485
Bbv12I GWGCWC 1 cut(s) 219
BbvI GCAGC 1 cut(s) 144
BccI CCATC 5 cut(s) 99, 203, 290, 419, 581
BfaI CTAG 7 cut(s) 11, 75, 186, 402, 419, 582, 671
BisI GCNGC 1 cut(s) 133
BlsI GCNGC 1 cut(s) 134
BmgBI CACGTC 1 cut(s) 514
BmiI GGNNCC 2 cut(s) 49, 487
BmsI GCATC 2 cut(s) 99, 568
Bpu10I CCTNAGC 2 cut(s) 176, 392
Bsc4I CCNNNNNNNGG 1 cut(s) 142
Bse1I ACTGG 1 cut(s) 207
BseGI GGATG 4 cut(s) 110, 114, 301, 592
BseLI CCNNNNNNNGG 1 cut(s) 142
BseNI ACTGG 1 cut(s) 207
BseRI GAGGAG 2 cut(s) 182, 398
BseXI GCAGC 1 cut(s) 144
BshNI GGYRCC 1 cut(s) 485
BsiHKAI GWGCWC 1 cut(s) 219
BslFI GGGAC 1 cut(s) 141
BslI CCNNNNNNNGG 1 cut(s) 142
BsmFI GGGAC 1 cut(s) 141
BsmI GAATGC 1 cut(s) 84
Bsp1286I GDGCHC 1 cut(s) 219
Bsp143I GATC 2 cut(s) 644, 717
BspACI CCGC 2 cut(s) 311, 406
BspLI GGNNCC 2 cut(s) 49, 487
BspPI GGATC 1 cut(s) 712
BspT107I GGYRCC 1 cut(s) 485
BsrI ACTGG 1 cut(s) 207
BssMI GATC 2 cut(s) 644, 717
BstC8I GCNNGC 1 cut(s) 490
BstDEI CTNAG 2 cut(s) 176, 392
BstF5I GGATG 4 cut(s) 110, 114, 301, 592
BstKTI GATC 2 cut(s) 647, 720
BstMBI GATC 2 cut(s) 644, 717
BstNSI RCATGY 1 cut(s) 629
BstV1I GCAGC 1 cut(s) 144
BtrI CACGTC 1 cut(s) 514
BtsCI GGATG 4 cut(s) 110, 114, 301, 592
BtsI GCAGTG 1 cut(s) 526
BtsIMutI CAGTG 1 cut(s) 526
Cac8I GCNNGC 1 cut(s) 490
CseI GACGC 1 cut(s) 138
CspCI CAANNNNNGTGG 2 cut(s) 345, 380
CviAII CATG 2 cut(s) 626, 722
CviJI RGCY 8 cut(s) 14, 74, 135, 377, 418, 503, 641, 674
CviKI_1 RGCY 8 cut(s) 14, 74, 135, 377, 418, 503, 641, 674
DdeI CTNAG 2 cut(s) 176, 392
DpnI GATC 2 cut(s) 646, 719
DpnII GATC 2 cut(s) 644, 717
DraI TTTAAA 2 cut(s) 69, 462
EciI GGCGGA 1 cut(s) 300
EcoRI GAATTC 1 cut(s) 6
FaeI CATG 2 cut(s) 629, 725
FaiI YATR 5 cut(s) 435, 557, 627, 723, 745
FaqI GGGAC 1 cut(s) 141
FatI CATG 2 cut(s) 625, 721
Fnu4HI GCNGC 1 cut(s) 133
FokI GGATG 4 cut(s) 117, 121, 308, 599
Fsp4HI GCNGC 1 cut(s) 133
FspBI CTAG 7 cut(s) 11, 75, 186, 402, 419, 582, 671
GluI GCNGC 1 cut(s) 133
HgaI GACGC 1 cut(s) 138
Hin1II CATG 2 cut(s) 629, 725
HinfI GANTC 4 cut(s) 158, 569, 666, 685
HphI GGTGA 1 cut(s) 224
Hpy188I TCNGA 4 cut(s) 52, 64, 163, 658
Hpy188III TCNNGA 1 cut(s) 731
HpyAV CCTTC 1 cut(s) 47
HpyCH4IV ACGT 1 cut(s) 513
HpyF3I CTNAG 2 cut(s) 176, 392
HpySE526I ACGT 1 cut(s) 513
Hsp92II CATG 2 cut(s) 629, 725
Kzo9I GATC 2 cut(s) 644, 717
LmnI GCTCC 2 cut(s) 313, 604
LpnPI CCDG 7 cut(s) 16, 188, 252, 468, 489, 502, 655
Lsp1109I GCAGC 1 cut(s) 144
LweI GCATC 2 cut(s) 99, 568
MaeI CTAG 7 cut(s) 11, 75, 186, 402, 419, 582, 671
MaeII ACGT 1 cut(s) 513
MaeIII GTNAC 1 cut(s) 509
MalI GATC 2 cut(s) 646, 719
MboI GATC 2 cut(s) 644, 717
MboII GAAGA 2 cut(s) 218, 434
MhlI GDGCHC 1 cut(s) 219
MluCI AATT 9 cut(s) 6, 85, 242, 303, 441, 542, 594, 648, 702
MmeI TCCRAC 2 cut(s) 214, 430
MseI TTAA 3 cut(s) 68, 245, 461
Mva1269I GAATGC 1 cut(s) 84
NdeII GATC 2 cut(s) 644, 717
NlaIII CATG 2 cut(s) 629, 725
NlaIV GGNNCC 2 cut(s) 49, 487
NmuCI GTSAC 1 cut(s) 509
NspI RCATGY 1 cut(s) 629
PctI GAATGC 1 cut(s) 84
PfeI GAWTC 4 cut(s) 158, 569, 666, 685
PkrI GCNGC 1 cut(s) 134
PspN4I GGNNCC 2 cut(s) 49, 487
SaqAI TTAA 3 cut(s) 68, 245, 461
SatI GCNGC 1 cut(s) 133
Sau3AI GATC 2 cut(s) 644, 717
SduI GDGCHC 1 cut(s) 219
SfaNI GCATC 2 cut(s) 99, 568
Sse9I AATT 9 cut(s) 6, 85, 242, 303, 441, 542, 594, 648, 702
SsiI CCGC 2 cut(s) 311, 406
SspMI CTAG 7 cut(s) 11, 75, 186, 402, 419, 582, 671
TaiI ACGT 1 cut(s) 516
TaqI TCGA 1 cut(s) 730
TasI AATT 9 cut(s) 6, 85, 242, 303, 441, 542, 594, 648, 702
TfiI GAWTC 4 cut(s) 158, 569, 666, 685
Tru1I TTAA 3 cut(s) 68, 245, 461
Tru9I TTAA 3 cut(s) 68, 245, 461
TscAI CASTG 1 cut(s) 526
TseFI GTSAC 1 cut(s) 509
TseI GCWGC 1 cut(s) 132
Tsp45I GTSAC 1 cut(s) 509
TspDTI ATGAA 1 cut(s) 255
TspRI CASTG 1 cut(s) 526
XapI RAATTY 3 cut(s) 6, 441, 542
XceI RCATGY 1 cut(s) 629
XspI CTAG 7 cut(s) 11, 75, 186, 402, 419, 582, 671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.