RLG00000029395

Methyltransferase-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
37995070 .. 37995592
523 bp
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UTR
Exon/CDS
Intron
RLM00000029395

Sequence Viewer

Length: 411 bp
ATGGCTATCCTCGATAAGACCACATACCACTTTCGACATGACTTGATAAGCCCATTTGGTTTCACCACCTTCACTTTCCCAAACCCTTCCGACTCCACCACCTCACTCCTCCGCGTCGCCGTTCTCGACTCGCCTTTCCAACTCCCGGCTGACGAGCCACCCCGAGTTGCCGCAATGCTCGTCCCCAAACACCGCCACTCCGACTGGATATTCTCGGGTTTGGTTTTGGAGAAATGCGTTGGGTGTTTGGTTGGTGAAATGGTGGTGGAGGATGTGGAGATTGACTCTGGTGGTGAGGTCTCAAAGAGGGAGTTCAGGAGGCGTTTGAGGTTTGAAAGAATGCCCTATGTGATCCAGACGGAGGTGCGCATTGATCCCAAAATGGGTTTTGGTATGGATGATAGTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

137

Amino Acids

15.48

Weight (kDa)

5.52

Isoelectric Point (pI)

62.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 368
AccII CGCG 1 cut(s) 114
AciI CCGC 3 cut(s) 112, 171, 193
AclWI GGATC 2 cut(s) 346, 368
AfiI CCNNNNNNNGG 3 cut(s) 145, 361, 383
AgsI TTSAA 1 cut(s) 335
Alw26I GTCTC 1 cut(s) 304
AlwI GGATC 2 cut(s) 346, 368
Ama87I CYCGRG 2 cut(s) 162, 214
AspLEI GCGC 1 cut(s) 369
AsuC2I CCSGG 1 cut(s) 146
AsuHPI GGTGA 3 cut(s) 55, 266, 305
AvaI CYCGRG 2 cut(s) 162, 214
BceAI ACGGC 1 cut(s) 104
BcnI CCSGG 1 cut(s) 146
BcoDI GTCTC 1 cut(s) 304
BisI GCNGC 1 cut(s) 171
BlsI GCNGC 1 cut(s) 172
Bme1390I CCNGG 1 cut(s) 146
BmeT110I CYCGRG 2 cut(s) 162, 214
BmrFI CCNGG 1 cut(s) 146
BplI GAGNNNNNCTC 2 cut(s) 269, 301
BpuMI CCSGG 1 cut(s) 146
BsaI GGTCTC 1 cut(s) 304
BsaXI ACNNNNNCTCC 2 cut(s) 182, 212
Bsc4I CCNNNNNNNGG 3 cut(s) 145, 361, 383
Bse1I ACTGG 1 cut(s) 209
Bse3DI GCAATG 1 cut(s) 180
BseGI GGATG 2 cut(s) 277, 403
BseLI CCNNNNNNNGG 3 cut(s) 145, 361, 383
BseMI GCAATG 1 cut(s) 180
BseNI ACTGG 1 cut(s) 209
BseRI GAGGAG 1 cut(s) 98
Bsh1236I CGCG 1 cut(s) 114
BsiHKCI CYCGRG 2 cut(s) 162, 214
BsiSI CCGG 1 cut(s) 146
BslFI GGGAC 1 cut(s) 167
BslI CCNNNNNNNGG 3 cut(s) 145, 361, 383
BsmAI GTCTC 1 cut(s) 304
BsmFI GGGAC 1 cut(s) 167
BsmI GAATGC 1 cut(s) 345
Bso31I GGTCTC 1 cut(s) 304
BsoBI CYCGRG 2 cut(s) 162, 214
Bsp143I GATC 2 cut(s) 351, 373
BspACI CCGC 3 cut(s) 112, 171, 193
BspFNI CGCG 1 cut(s) 114
BspPI GGATC 2 cut(s) 346, 368
BspTNI GGTCTC 1 cut(s) 304
BsrDI GCAATG 1 cut(s) 180
BsrI ACTGG 1 cut(s) 209
BssMI GATC 2 cut(s) 351, 373
BstF5I GGATG 2 cut(s) 277, 403
BstFNI CGCG 1 cut(s) 114
BstHHI GCGC 1 cut(s) 369
BstKTI GATC 2 cut(s) 354, 376
BstMAI GTCTC 1 cut(s) 304
BstMBI GATC 2 cut(s) 351, 373
BstSCI CCNGG 1 cut(s) 144
BstUI CGCG 1 cut(s) 114
BtsCI GGATG 2 cut(s) 277, 403
CfoI GCGC 1 cut(s) 369
CseI GACGC 1 cut(s) 103
CviAII CATG 1 cut(s) 38
CviJI RGCY 4 cut(s) 5, 51, 149, 157
CviKI_1 RGCY 4 cut(s) 5, 51, 149, 157
DpnI GATC 2 cut(s) 353, 375
DpnII GATC 2 cut(s) 351, 373
Eco31I GGTCTC 1 cut(s) 304
Eco88I CYCGRG 2 cut(s) 162, 214
FaeI CATG 1 cut(s) 41
FaiI YATR 4 cut(s) 25, 39, 348, 395
FaqI GGGAC 1 cut(s) 167
FatI CATG 1 cut(s) 37
Fnu4HI GCNGC 1 cut(s) 171
FokI GGATG 1 cut(s) 284
Fsp4HI GCNGC 1 cut(s) 171
FspAI RTGCGCAY 1 cut(s) 368
FspI TGCGCA 1 cut(s) 368
GlaI GCGC 1 cut(s) 368
GluI GCNGC 1 cut(s) 171
HapII CCGG 1 cut(s) 146
HgaI GACGC 1 cut(s) 103
HhaI GCGC 1 cut(s) 369
Hin1II CATG 1 cut(s) 41
Hin6I GCGC 1 cut(s) 367
HinP1I GCGC 1 cut(s) 367
HinfI GANTC 3 cut(s) 92, 128, 284
HpaII CCGG 1 cut(s) 146
HphI GGTGA 3 cut(s) 55, 266, 305
Hpy188I TCNGA 2 cut(s) 91, 202
Hpy188III TCNNGA 3 cut(s) 125, 316, 355
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 2 cut(s) 79, 96
Hsp92II CATG 1 cut(s) 41
HspAI GCGC 1 cut(s) 367
Kzo9I GATC 2 cut(s) 351, 373
LpnPI CCDG 5 cut(s) 159, 190, 273, 301, 368
MalI GATC 2 cut(s) 353, 375
MboI GATC 2 cut(s) 351, 373
MlyI GAGTC 3 cut(s) 86, 122, 278
MmeI TCCRAC 3 cut(s) 114, 163, 225
MnlI CCTC 9 cut(s) 20, 112, 119, 262, 289, 300, 312, 321, 355
MspI CCGG 1 cut(s) 146
MspR9I CCNGG 1 cut(s) 146
Mva1269I GAATGC 1 cut(s) 345
MvnI CGCG 1 cut(s) 114
NciI CCSGG 1 cut(s) 146
NdeII GATC 2 cut(s) 351, 373
NlaIII CATG 1 cut(s) 41
NsbI TGCGCA 1 cut(s) 368
PcsI WCGNNNNNNNCGW 1 cut(s) 123
PctI GAATGC 1 cut(s) 345
PkrI GCNGC 1 cut(s) 172
PleI GAGTC 3 cut(s) 86, 122, 278
PpsI GAGTC 3 cut(s) 86, 122, 278
SatI GCNGC 1 cut(s) 171
Sau3AI GATC 2 cut(s) 351, 373
SchI GAGTC 3 cut(s) 86, 122, 278
ScrFI CCNGG 1 cut(s) 146
SetI ASST 5 cut(s) 71, 104, 300, 332, 366
SsiI CCGC 3 cut(s) 112, 171, 193
StyD4I CCNGG 1 cut(s) 144
TaqI TCGA 3 cut(s) 12, 34, 126
TauI GCSGC 1 cut(s) 173
TspGWI ACGGA 1 cut(s) 374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.