RchiOBHm_Chr6g0253371

histone deacetylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000538
Physical Location & Seq
Reverse (-)
8497372 .. 8499691
2320 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22719

Sequence Viewer

Length: 1383 bp
ATGAAAGCTGACTCTAACTCTGGTTTTTCTCTTAAGAGCCAGAAGCAGTGCGATCATCACTCGGCTTTTTTGTGCTGTGATCTCACTGGCGTTCCCAGCCATGACATTCATTGCAAAAGATGTCAGCGTCCCAAGGAGAATTGGTTTTGTTTGTCCTGTAAGGACGTCTTCTGTAGTGTTAACCGACATGTTTCTGAGCATTATAATCAGACAAAGCATTGTCTTTTTGTATACTGCAGTAATAAATCAACTTGGTGTTGCTCCTGCAAAAAATATCTAGATGCGGAAGTCATCAAACAATTGTGGGCCAATAAGCAGAGTCGATCATCTTCAGCCAAGCTCGAGAGCATTGATGCAAAGGTTGTTGATGTTACTGATCTCTTGTCCAAGCCATTTCCTACCATCAATGTTCATCCACAGTTGGATGTTCCGTTGTCTGTTGGCCAGGACGAGCTTGCCTTGGCTAAGGAGGGACTCCGGAATGTCTTTGATCGCGGTTTAAAAGCTCTAGCTGATTCCAAGGTGCAAGAAGAATTTCTCCTTTACTCAGCCACGCTGCTATCAGCCGAGTCATGCCCATCAGAGTTGAAGGTTAACCTTTCATCATTCAGATGTAATCTTTCGGAAGAAACCTCTGCTTTCATTAAAGCTCAAGATGAGTTGAAGGTGGCCTCAGAGTTATCAGCCTCGATTACCCAGAAGTTGTTTGTGGTGAGGCAACAAACTTCGAAGTATGATGAGGTAAAGAAAGAAATGATTGCCTCGGACGAGAAAGTTGCCAAGTATAAGTCCACGATCAAAGAGTTGGAAGCTTGTTTAGCCACAGAAGTAAGCAACAGGAAAAAGATTGATGAGGTTATCGATTCGATCGAGACACAAATCACCATAGCGAGAGATGGACTGGTCCCGGACTTGGCACAAGCGTCTTCCATGGAGGGAAGGACCCAAGCAGCTTACCAGTTATTAACTCGAAAACAGTCGCACTGGGATAACCTAAAGATTATGTTTACTAGGTTTGCAATTGCAAACGCCACCATGAGTCGACATCCTAGTGTGAAGTGGGCTCAGCAGCCTGATACGCTTTACATCACTATTGAGTTGCCTGATGCCCAGGATGTAAAGCTTACACTGGAGCCTGAAGGAAAGTTTCTATTCTCTGCTACAGCTGGAGCAGAAAAGACACCCTATGTAGTTGATCTTGATCTCTATGACAAGATTGATGTAAATGAGAGTAGGTATAGTGTTGGCTCGAGAAACATCTTTCACCTAGTGAAAAAAGCTGAAAATAAATGGTGGAGCAGATTGATAAAACAAGAAGGAAAAGCTCCTGGGTTCTTGAAAGTTGATTGGGATAATTGGGGAGATGAGCAGGCGGGGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-UBP

Protein Analysis

460

Amino Acids

51.93

Weight (kDa)

6.83

Isoelectric Point (pI)

40.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-UBP PF02148 38 - 95 5.8e-12 Zn-finger in ubiquitin-hydrolases and other protein
CS PF04969 350 - 426 5.2e-11 CS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000538)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04050 FvH4_2g04050 FvH4_2g04050 FvH4_2g04050 FvH4_2g04050
rosa_chinensis RchiOBHm_Chr6g0253231 RchiOBHm_Chr6g0253251 RchiOBHm_Chr6g0253261 RchiOBHm_Chr6g0253271 RchiOBHm_Chr6g0253291 RchiOBHm_Chr6g0253321 RchiOBHm_Chr6g0253331 RchiOBHm_Chr6g0253341 RchiOBHm_Chr6g0253371 RchiOBHm_Chr6g0253401
rosa_laevigata RLG00000015022 RLG00000015023 RLG00000015024 RLG00000015027 RLG00000015028 RLG00000015030 RLG00000015031 RLG00000015034 RLG00000015035 RLG00000015038 RLG00000015041
rosa_multiflora Rmu_sc0001257.1_g000004 Rmu_sc0001257.1_g000008 Rmu_sc0001257.1_g000014 Rmu_sc0001257.1_g000016 Rmu_sc0001257.1_g000019 Rmu_sc0001257.1_g000026 Rmu_sc0002560.1_g000013 Rmu_sc0002560.1_g000020 Rmu_sc0002560.1_g000021 Rmu_sc0003855.1_g000005 Rmu_sc0003855.1_g000011 Rmu_sc0003898.1_g000003 Rmu_sc0003898.1_g000005 Rmu_sc0003898.1_g000016 Rmu_sc0003898.1_g000017 Rmu_sc0005439.1_g000007 Rmu_sc0005439.1_g000014 Rmu_sc0005439.1_g000021
rosa_roxburghii Rroxscaffold_7G00211930 Rroxscaffold_7G00211940 Rroxscaffold_7G00211960 Rroxscaffold_7G00211980 Rroxscaffold_7G00211990 Rroxscaffold_7G00212000 Rroxscaffold_7G00212050 Rroxscaffold_7G00212060 Rroxscaffold_7G00212070 Rroxscaffold_7G00212080 Rroxscaffold_7G00212160
rosa_rugosa Rorug05G0542900 Rorug05G0542900 Rorug05G0543000 Rorug05G0543100 Rorug05G0543100 Rorug05G0543200 Rorug05G0543300 Rorug05G0543400 Rorug05G0543400 Rorug05G0543500 Rorug05G0543600 Rorug05G0543700
rosa_samantha Rh6CG050000 Rh6DG045200 Rh6DG045500 Rh6DG045600 Rh6DG045700 Rh6DG045800 Rh6DG046200 Rh6DG046300 Rh6DG046400 Rh6DG046500 Rh6DG046700 Rh6DG046800
rosa_wichuraiana Rw0G000070 Rw6G005230 Rw6G005240 Rw6G005280 Rw6G005290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 204
AatII GACGTC 1 cut(s) 168
AccI GTMKAC 2 cut(s) 231, 1042
AccII CGCG 1 cut(s) 495
AccIII TCCGGA 1 cut(s) 477
AciI CCGC 3 cut(s) 284, 495, 1373
AcoI YGGCCR 1 cut(s) 442
AcsI RAATTY 1 cut(s) 533
AcuI CTGAAG 2 cut(s) 315, 1158
AcyI GRCGYC 1 cut(s) 165
AdeI CACNNNGTG 1 cut(s) 1270
AfiI CCNNNNNNNGG 1 cut(s) 913
AflII CTTAAG 1 cut(s) 32
AflIII ACRYGT 1 cut(s) 187
AgsI TTSAA 3 cut(s) 589, 664, 1339
AjnI CCWGG 3 cut(s) 444, 1110, 1327
Alw26I GTCTC 1 cut(s) 866
Ama87I CYCGRG 2 cut(s) 341, 1249
Aor13HI TCCGGA 1 cut(s) 477
AoxI GGCC 3 cut(s) 306, 442, 669
ApeKI GCWGC 3 cut(s) 556, 950, 1069
ApoI RAATTY 1 cut(s) 533
Asp700I GAANNNNTTC 1 cut(s) 534
AspS9I GGNCC 3 cut(s) 306, 904, 942
AsuC2I CCSGG 1 cut(s) 908
AsuHPI GGTGA 3 cut(s) 724, 874, 1256
AsuII TTCGAA 1 cut(s) 728
AvaI CYCGRG 2 cut(s) 341, 1249
AvaII GGWCC 2 cut(s) 904, 942
BalI TGGCCA 1 cut(s) 444
BanII GRGCYC 1 cut(s) 1066
BbsI GAAGAC 2 cut(s) 160, 918
BbvI GCAGC 3 cut(s) 543, 962, 1081
BccI CCATC 3 cut(s) 410, 586, 890
BcgI CGANNNNNNTGC 2 cut(s) 758, 792
BciT130I CCWGG 3 cut(s) 446, 1112, 1329
BcnI CCSGG 1 cut(s) 908
BcoDI GTCTC 1 cut(s) 866
BfaI CTAG 6 cut(s) 278, 509, 1011, 1050, 1268, 1381
BfmI CTRYAG 3 cut(s) 172, 235, 1161
BfrI CTTAAG 1 cut(s) 32
BisI GCNGC 3 cut(s) 557, 951, 1070
BlpI GCTNAGC 1 cut(s) 1065
BlsI GCNGC 3 cut(s) 558, 952, 1071
Bme1390I CCNGG 4 cut(s) 446, 908, 1112, 1329
Bme18I GGWCC 2 cut(s) 904, 942
BmeT110I CYCGRG 2 cut(s) 341, 1249
BmgT120I GGNCC 3 cut(s) 306, 904, 942
BmiI GGNNCC 3 cut(s) 906, 944, 1134
BmrFI CCNGG 4 cut(s) 446, 908, 1112, 1329
BmrI ACTGGG 1 cut(s) 994
BmsI GCATC 3 cut(s) 271, 343, 1096
BmuI ACTGGG 1 cut(s) 994
BpiI GAAGAC 2 cut(s) 160, 918
BpmI CTGGAG 2 cut(s) 1151, 1188
Bpu10I CCTNAGC 1 cut(s) 465
Bpu1102I GCTNAGC 1 cut(s) 1065
Bpu14I TTCGAA 1 cut(s) 728
BpuEI CTTGAG 1 cut(s) 636
BpuMI CCSGG 1 cut(s) 908
Bsa29I ATCGAT 1 cut(s) 861
BsaBI GATNNNNATC 1 cut(s) 1200
BsaHI GRCGYC 1 cut(s) 165
BsaJI CCNNGG 7 cut(s) 132, 459, 519, 762, 930, 1110, 1328
BsaWI WCCGGW 1 cut(s) 477
BsaXI ACNNNNNCTCC 2 cut(s) 128, 158
Bsc4I CCNNNNNNNGG 1 cut(s) 913
Bse1I ACTGG 5 cut(s) 91, 906, 958, 989, 1134
Bse3DI GCAATG 1 cut(s) 109
Bse8I GATNNNNATC 1 cut(s) 1200
BseAI TCCGGA 1 cut(s) 477
BseBI CCWGG 3 cut(s) 446, 1112, 1329
BseCI ATCGAT 1 cut(s) 861
BseDI CCNNGG 7 cut(s) 132, 459, 519, 762, 930, 1110, 1328
BseGI GGATG 4 cut(s) 412, 430, 1045, 1120
BseJI GATNNNNATC 1 cut(s) 1200
BseLI CCNNNNNNNGG 1 cut(s) 913
BseMI GCAATG 1 cut(s) 109
BseMII CTCAG 4 cut(s) 186, 561, 687, 1079
BseNI ACTGG 5 cut(s) 91, 906, 958, 989, 1134
BseXI GCAGC 3 cut(s) 543, 962, 1081
BseYI CCCAGC 1 cut(s) 95
Bsh1236I CGCG 1 cut(s) 495
Bsh1285I CGRYCG 1 cut(s) 870
BshFI GGCC 3 cut(s) 308, 444, 671
BshVI ATCGAT 1 cut(s) 861
BsiEI CGRYCG 1 cut(s) 870
BsiHKCI CYCGRG 2 cut(s) 341, 1249
BsiSI CCGG 2 cut(s) 478, 908
BslFI GGGAC 3 cut(s) 114, 486, 890
BslI CCNNNNNNNGG 1 cut(s) 913
BsmAI GTCTC 1 cut(s) 866
BsmFI GGGAC 3 cut(s) 114, 486, 890
BsnI GGCC 3 cut(s) 308, 444, 671
BsoBI CYCGRG 2 cut(s) 341, 1249
Bsp119I TTCGAA 1 cut(s) 728
Bsp1286I GDGCHC 1 cut(s) 1066
Bsp13I TCCGGA 1 cut(s) 477
Bsp1720I GCTNAGC 1 cut(s) 1065
Bsp19I CCATGG 1 cut(s) 930
BspACI CCGC 3 cut(s) 284, 495, 1373
BspANI GGCC 3 cut(s) 308, 444, 671
BspCNI CTCAG 4 cut(s) 187, 560, 686, 1078
BspDI ATCGAT 1 cut(s) 861
BspEI TCCGGA 1 cut(s) 477
BspFNI CGCG 1 cut(s) 495
BspLI GGNNCC 3 cut(s) 906, 944, 1134
BspMAI CTGCAG 1 cut(s) 239
BspT104I TTCGAA 1 cut(s) 728
BspTI CTTAAG 1 cut(s) 32
BsrDI GCAATG 1 cut(s) 109
BsrI ACTGG 5 cut(s) 91, 906, 958, 989, 1134
BssECI CCNNGG 7 cut(s) 132, 459, 519, 762, 930, 1110, 1328
BssNAI GTATAC 1 cut(s) 232
BssNI GRCGYC 1 cut(s) 165
BssT1I CCWWGG 4 cut(s) 132, 459, 519, 930
Bst1107I GTATAC 1 cut(s) 232
Bst2UI CCWGG 3 cut(s) 446, 1112, 1329
Bst4CI ACNGT 2 cut(s) 420, 978
BstACI GRCGYC 1 cut(s) 165
BstAFI CTTAAG 1 cut(s) 32
BstBI TTCGAA 1 cut(s) 728
BstC8I GCNNGC 2 cut(s) 456, 1371
BstDEI CTNAG 5 cut(s) 195, 465, 547, 673, 1065
BstDSI CCRYGG 1 cut(s) 930
BstF5I GGATG 4 cut(s) 412, 430, 1045, 1120
BstFNI CGCG 1 cut(s) 495
BstMAI GTCTC 1 cut(s) 866
BstMCI CGRYCG 1 cut(s) 870
BstMWI GCNNNNNNNGC 3 cut(s) 96, 818, 1078
BstNI CCWGG 3 cut(s) 446, 1112, 1329
BstNSI RCATGY 1 cut(s) 191
BstSCI CCNGG 4 cut(s) 444, 906, 1110, 1327
BstSFI CTRYAG 3 cut(s) 172, 235, 1161
BstUI CGCG 1 cut(s) 495
BstV1I GCAGC 3 cut(s) 543, 962, 1081
BstV2I GAAGAC 2 cut(s) 160, 918
BstX2I RGATCY 1 cut(s) 1377
BstYI RGATCY 1 cut(s) 1377
BstZ17I GTATAC 1 cut(s) 232
Bsu15I ATCGAT 1 cut(s) 861
BsuRI GGCC 3 cut(s) 308, 444, 671
BsuTUI ATCGAT 1 cut(s) 861
BtgI CCRYGG 1 cut(s) 930
BtsCI GGATG 4 cut(s) 412, 430, 1045, 1120
BtsI GCAGTG 1 cut(s) 53
BtsIMutI CAGTG 4 cut(s) 53, 84, 982, 1127
Cac8I GCNNGC 2 cut(s) 456, 1371
Cfr13I GGNCC 3 cut(s) 306, 904, 942
ClaI ATCGAT 1 cut(s) 861
CseI GACGC 2 cut(s) 116, 912
CviAII CATG 5 cut(s) 101, 188, 573, 931, 1036
DdeI CTNAG 5 cut(s) 195, 465, 547, 673, 1065
DraI TTTAAA 1 cut(s) 501
DraIII CACNNNGTG 1 cut(s) 1270
EaeI YGGCCR 1 cut(s) 442
Eco130I CCWWGG 4 cut(s) 132, 459, 519, 930
Eco24I GRGCYC 1 cut(s) 1066
Eco47I GGWCC 2 cut(s) 904, 942
Eco57I CTGAAG 2 cut(s) 315, 1158
Eco88I CYCGRG 2 cut(s) 341, 1249
EcoO109I RGGNCCY 1 cut(s) 942
EcoRII CCWGG 3 cut(s) 444, 1110, 1327
EcoT14I CCWWGG 4 cut(s) 132, 459, 519, 930
EcoT38I GRGCYC 1 cut(s) 1066
ErhI CCWWGG 4 cut(s) 132, 459, 519, 930
FaeI CATG 5 cut(s) 104, 191, 576, 934, 1039
FalI AAGNNNNNCTT 2 cut(s) 152, 184
FaqI GGGAC 3 cut(s) 114, 486, 890
FatI CATG 5 cut(s) 100, 187, 572, 930, 1035
FauI CCCGC 1 cut(s) 1366
FblI GTMKAC 2 cut(s) 231, 1042
Fnu4HI GCNGC 3 cut(s) 557, 951, 1070
FokI GGATG 4 cut(s) 399, 437, 1032, 1127
FriOI GRGCYC 1 cut(s) 1066
Fsp4HI GCNGC 3 cut(s) 557, 951, 1070
FspBI CTAG 6 cut(s) 278, 509, 1011, 1050, 1268, 1381
GluI GCNGC 3 cut(s) 557, 951, 1070
GsaI CCCAGC 1 cut(s) 99
GsuI CTGGAG 2 cut(s) 1151, 1188
HaeIII GGCC 3 cut(s) 308, 444, 671
HapII CCGG 2 cut(s) 478, 908
HgaI GACGC 2 cut(s) 116, 912
Hin1I GRCGYC 1 cut(s) 165
Hin1II CATG 5 cut(s) 104, 191, 576, 934, 1039
HincII GTYRAC 3 cut(s) 181, 595, 1043
HindII GTYRAC 3 cut(s) 181, 595, 1043
HindIII AAGCTT 2 cut(s) 810, 1121
HinfI GANTC 7 cut(s) 11, 319, 474, 515, 569, 863, 1039
HpaI GTTAAC 2 cut(s) 181, 595
HpaII CCGG 2 cut(s) 478, 908
HphI GGTGA 3 cut(s) 724, 874, 1256
Hpy166II GTNNAC 6 cut(s) 181, 232, 595, 792, 1008, 1043
Hpy188I TCNGA 7 cut(s) 196, 210, 583, 611, 625, 676, 766
Hpy188III TCNNGA 8 cut(s) 278, 343, 478, 653, 871, 1199, 1251, 1336
Hpy8I GTNNAC 6 cut(s) 181, 232, 595, 792, 1008, 1043
HpyAV CCTTC 5 cut(s) 583, 658, 933, 1133, 1310
HpyCH4III ACNGT 2 cut(s) 420, 978
HpyCH4IV ACGT 1 cut(s) 165
HpyCH4V TGCA 7 cut(s) 114, 237, 267, 356, 526, 1019, 1025
HpyF10VI GCNNNNNNNGC 3 cut(s) 96, 818, 1078
HpyF3I CTNAG 5 cut(s) 195, 465, 547, 673, 1065
HpySE526I ACGT 1 cut(s) 165
Hsp92I GRCGYC 1 cut(s) 165
Hsp92II CATG 5 cut(s) 104, 191, 576, 934, 1039
Kpn2I TCCGGA 1 cut(s) 477
KspAI GTTAAC 2 cut(s) 181, 595
LmnI GCTCC 5 cut(s) 266, 1132, 1169, 1296, 1330
Lsp1109I GCAGC 3 cut(s) 543, 962, 1081
LweI GCATC 3 cut(s) 271, 343, 1096
MaeI CTAG 6 cut(s) 278, 509, 1011, 1050, 1268, 1381
MaeII ACGT 1 cut(s) 165
MaeIII GTNAC 1 cut(s) 370
MboII GAAGA 5 cut(s) 160, 321, 542, 638, 918
MfeI CAATTG 2 cut(s) 299, 1020
MflI RGATCY 1 cut(s) 1377
MhlI GDGCHC 1 cut(s) 1066
MlsI TGGCCA 1 cut(s) 444
MluCI AATT 5 cut(s) 139, 299, 533, 1020, 1354
MluNI TGGCCA 1 cut(s) 444
MlyI GAGTC 5 cut(s) 5, 328, 468, 578, 1048
MmeI TCCRAC 2 cut(s) 402, 786
MnlI CCTC 9 cut(s) 463, 643, 682, 697, 708, 733, 772, 847, 928
Mox20I TGGCCA 1 cut(s) 444
MroI TCCGGA 1 cut(s) 477
MroXI GAANNNNTTC 1 cut(s) 534
MscI TGGCCA 1 cut(s) 444
MseI TTAA 6 cut(s) 33, 180, 500, 594, 645, 965
MslI CAYNNNNRTG 2 cut(s) 610, 1050
Msp20I TGGCCA 1 cut(s) 444
MspA1I CMGCKG 1 cut(s) 1166
MspCI CTTAAG 1 cut(s) 32
MspI CCGG 2 cut(s) 478, 908
MspR9I CCNGG 4 cut(s) 446, 908, 1112, 1329
MunI CAATTG 2 cut(s) 299, 1020
MvaI CCWGG 3 cut(s) 446, 1112, 1329
MvnI CGCG 1 cut(s) 495
MwoI GCNNNNNNNGC 3 cut(s) 96, 818, 1078
NciI CCSGG 1 cut(s) 908
NcoI CCATGG 1 cut(s) 930
NlaIII CATG 5 cut(s) 104, 191, 576, 934, 1039
NlaIV GGNNCC 3 cut(s) 906, 944, 1134
NmeAIII GCCGAG 2 cut(s) 41, 592
NspI RCATGY 1 cut(s) 191
NspV TTCGAA 1 cut(s) 728
PaeR7I CTCGAG 2 cut(s) 341, 1249
PciI ACATGT 1 cut(s) 187
PcsI WCGNNNNNNNCGW 1 cut(s) 867
PdmI GAANNNNTTC 1 cut(s) 534
PfeI GAWTC 2 cut(s) 515, 863
PfoI TCCNGGA 1 cut(s) 906
PkrI GCNGC 3 cut(s) 558, 952, 1071
Ple19I CGATCG 1 cut(s) 870
PleI GAGTC 5 cut(s) 5, 327, 468, 577, 1047
PpsI GAGTC 5 cut(s) 5, 327, 468, 577, 1047
PpuMI RGGWCCY 1 cut(s) 942
PscI ACATGT 1 cut(s) 187
PsiI TTATAA 1 cut(s) 204
Psp5II RGGWCCY 1 cut(s) 942
Psp6I CCWGG 3 cut(s) 444, 1110, 1327
PspFI CCCAGC 1 cut(s) 95
PspGI CCWGG 3 cut(s) 444, 1110, 1327
PspN4I GGNNCC 3 cut(s) 906, 944, 1134
PspPI GGNCC 3 cut(s) 306, 904, 942
PspPPI RGGWCCY 1 cut(s) 942
PstI CTGCAG 1 cut(s) 239
PsuI RGATCY 1 cut(s) 1377
PvuI CGATCG 1 cut(s) 870
PvuII CAGCTG 1 cut(s) 1166
RseI CAYNNNNRTG 2 cut(s) 610, 1050
SalI GTCGAC 1 cut(s) 1041
SaqAI TTAA 6 cut(s) 33, 180, 500, 594, 645, 965
SatI GCNGC 3 cut(s) 557, 951, 1070
Sau96I GGNCC 3 cut(s) 306, 904, 942
SchI GAGTC 5 cut(s) 5, 328, 468, 578, 1048
ScrFI CCNGG 4 cut(s) 446, 908, 1112, 1329
SduI GDGCHC 1 cut(s) 1066
SfaNI GCATC 3 cut(s) 271, 343, 1096
SfcI CTRYAG 3 cut(s) 172, 235, 1161
Sfr274I CTCGAG 2 cut(s) 341, 1249
SfuI TTCGAA 1 cut(s) 728
SinI GGWCC 2 cut(s) 904, 942
SlaI CTCGAG 2 cut(s) 341, 1249
SmiMI CAYNNNNRTG 2 cut(s) 610, 1050
SmlI CTYRAG 4 cut(s) 32, 341, 651, 1249
SmoI CTYRAG 4 cut(s) 32, 341, 651, 1249
Sse9I AATT 5 cut(s) 139, 299, 533, 1020, 1354
SsiI CCGC 3 cut(s) 284, 495, 1373
SspMI CTAG 6 cut(s) 278, 509, 1011, 1050, 1268, 1381
StyD4I CCNGG 4 cut(s) 444, 906, 1110, 1327
StyI CCWWGG 4 cut(s) 132, 459, 519, 930
TaaI ACNGT 2 cut(s) 420, 978
TaiI ACGT 1 cut(s) 168
TasI AATT 5 cut(s) 139, 299, 533, 1020, 1354
TfiI GAWTC 2 cut(s) 515, 863
Tru1I TTAA 6 cut(s) 33, 180, 500, 594, 645, 965
Tru9I TTAA 6 cut(s) 33, 180, 500, 594, 645, 965
TscAI CASTG 4 cut(s) 53, 91, 989, 1134
TseI GCWGC 3 cut(s) 556, 950, 1069
TspDTI ATGAA 5 cut(s) 17, 98, 401, 591, 631
TspGWI ACGGA 1 cut(s) 420
TspRI CASTG 4 cut(s) 53, 91, 989, 1134
Vha464I CTTAAG 1 cut(s) 32
VpaK11BI GGWCC 2 cut(s) 904, 942
XapI RAATTY 1 cut(s) 533
XbaI TCTAGA 1 cut(s) 277
XceI RCATGY 1 cut(s) 191
XhoI CTCGAG 2 cut(s) 341, 1249
XmiI GTMKAC 2 cut(s) 231, 1042
XmnI GAANNNNTTC 1 cut(s) 534
XspI CTAG 6 cut(s) 278, 509, 1011, 1050, 1268, 1381
ZraI GACGTC 1 cut(s) 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.