Rorug05G0543200

histone deacetylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000538
Physical Location & Seq
Forward (+)
73133276 .. 73136499
3224 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0543200.1

Sequence Viewer

Length: 942 bp
ATGGAGGAGGCGGTACCGTTCAAGAACCTCAACAGCCGAGAGTACCACGGCCACGAGAAGAAGGTGCACTCTGTGGCTTGGAACTGCACCGGCACCAAGCTCGCATCGGGTTCCGTGGACCAAACCGCTCGGATTTGGCACATTGAGCCTCACGGACATAGTAAGCCTAAAGGTGTGGAATTGAGGGGGCACACGGATAGTGTGGATCAGCTGTGTTGGGATCCCAAGCATGCTGATTTGGTTGCCACTGCCTCCGGAGATAAAACCGTTCGGCTATGGGATGCGCGGACTGGGAAGTGTGCGCAGCTAGCGGAGCTTAGTGGCGAAAACATTAACATTACGTATAAGCCGGATGGGACGCACATTGCGGTTGGTAATAGGGATGATGAACTAACGATTTTGGATGTTCGGAAATTTAAGCCAATTCACAAGAGGAAGTTCAATTATGAGGTTAATGAAATTGCTTGGAACACAACAAGTGATATTTTCTTCTTGACGACTGGAAATGGCACCGTTGAAGTACTATCATACCCATCTCTTAAACCAGTGGACACTCTAATGGCTCATACAGCTGGTTGCTATTGCATTGCAATTGACCCACGTGGAAGATATTTTGCTGTTGGGAGTGCCGATTCCCTGGTCAGCTTGTGGGATATCTCAGAGATGCTCTGTGTGCGAACATTTACAAAACTTGAATCGCCTGTGAGAACAATAAGCTTCAACCATACTGGAGAGTATCTTGCTTGTGCCAGTGAAGACTGGTTTATTGATATATCAAATGTTCAAACTGGGCGGACGGTGCATCAAATTCCTTGTAGGGCTGCCATGAACAGTGTGGAGTGGAATCCTAAAAGCAATCTACTTGCATATGCTGGGGATGACAAGATCAAACCCCCTGGTGAAGGTATCTTTAGGATATTTGGCTTCAAAAGTTCGAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-UBP

Protein Analysis

313

Amino Acids

34.87

Weight (kDa)

6.5

Isoelectric Point (pI)

25.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_WDHD1_1st PF24817 11 - 161 2.2e-15 WDHD1 first WD40 domain
WD40_CDC20-Fz PF24807 12 - 102 8e-16 CDC20/Fizzy WD40 domain
WD40_Gbeta PF25391 12 - 139 2.4e-08 G protein beta WD-40 repeat protein
Beta-prop_TEP1_2nd PF25047 13 - 108 5.3e-06 TEP-1 second beta-propeller
WD40 PF00400 13 - 46 4.7e-08 WD domain, G-beta repeat
WDR55 PF24796 13 - 140 5.8e-08 WDR55
WD40_Prp19 PF24814 13 - 141 1.4e-18 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 14 - 134 3.4e-19 WDR3 first beta-propeller domain
Beta-prop_WDR3_2nd PF25172 15 - 131 9e-07 WDR3 second beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 15 - 102 1.1e-12 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5 PF25175 16 - 141 8.6e-21 WDR5 beta-propeller domain
Beta-prop_Aladin PF25460 16 - 172 5e-10 Aladin seven-bladed propeller
EIF3I PF24805 16 - 125 9.3e-09 EIF3I
Beta-prop_THOC3 PF25174 18 - 291 1e-121 THOC3 beta-propeller domain
WD40 PF00400 60 - 94 1.8e-06 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 61 - 145 2.2e-06 CAF1B/HIR1 beta-propeller domain
Beta-prop_EML_2 PF23414 71 - 146 1.3e-10 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR19_1st PF23389 71 - 220 1.8e-09 WDR19 first beta-propeller
WD40_CDC20-Fz PF24807 111 - 289 1.4e-20 CDC20/Fizzy WD40 domain
WD40_WDHD1_1st PF24817 112 - 297 2.7e-21 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 113 - 295 6.7e-25 WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 125 - 251 4.8e-09 WDR36/Utp21 second beta-propeller domain
Beta-prop_EML_2 PF23414 128 - 289 1.1e-17 Echinoderm microtubule-associated protein second beta-propeller
EIF3I PF24805 140 - 251 4.7e-09 EIF3I
Beta-prop_WDR3_1st PF25173 148 - 295 1.2e-13 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 148 - 294 6.1e-18 Prp19 WD40 domain
WD40 PF00400 181 - 218 1.2e-07 WD domain, G-beta repeat
WD40_Gbeta PF25391 184 - 256 3.3e-09 G protein beta WD-40 repeat protein
Beta-prop_WDR36-Utp21_2nd PF25168 213 - 294 9.4e-06 WDR36/Utp21 second beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000538)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04050 FvH4_2g04050 FvH4_2g04050 FvH4_2g04050 FvH4_2g04050
rosa_chinensis RchiOBHm_Chr6g0253231 RchiOBHm_Chr6g0253251 RchiOBHm_Chr6g0253261 RchiOBHm_Chr6g0253271 RchiOBHm_Chr6g0253291 RchiOBHm_Chr6g0253321 RchiOBHm_Chr6g0253331 RchiOBHm_Chr6g0253341 RchiOBHm_Chr6g0253371 RchiOBHm_Chr6g0253401
rosa_laevigata RLG00000015022 RLG00000015023 RLG00000015024 RLG00000015027 RLG00000015028 RLG00000015030 RLG00000015031 RLG00000015034 RLG00000015035 RLG00000015038 RLG00000015041
rosa_multiflora Rmu_sc0001257.1_g000004 Rmu_sc0001257.1_g000008 Rmu_sc0001257.1_g000014 Rmu_sc0001257.1_g000016 Rmu_sc0001257.1_g000019 Rmu_sc0001257.1_g000026 Rmu_sc0002560.1_g000013 Rmu_sc0002560.1_g000020 Rmu_sc0002560.1_g000021 Rmu_sc0003855.1_g000005 Rmu_sc0003855.1_g000011 Rmu_sc0003898.1_g000003 Rmu_sc0003898.1_g000005 Rmu_sc0003898.1_g000016 Rmu_sc0003898.1_g000017 Rmu_sc0005439.1_g000007 Rmu_sc0005439.1_g000014 Rmu_sc0005439.1_g000021
rosa_roxburghii Rroxscaffold_7G00211930 Rroxscaffold_7G00211940 Rroxscaffold_7G00211960 Rroxscaffold_7G00211980 Rroxscaffold_7G00211990 Rroxscaffold_7G00212000 Rroxscaffold_7G00212050 Rroxscaffold_7G00212060 Rroxscaffold_7G00212070 Rroxscaffold_7G00212080 Rroxscaffold_7G00212160
rosa_rugosa Rorug05G0542900 Rorug05G0542900 Rorug05G0543000 Rorug05G0543100 Rorug05G0543100 Rorug05G0543200 Rorug05G0543300 Rorug05G0543400 Rorug05G0543400 Rorug05G0543500 Rorug05G0543600 Rorug05G0543700
rosa_samantha Rh6CG050000 Rh6DG045200 Rh6DG045500 Rh6DG045600 Rh6DG045700 Rh6DG045800 Rh6DG046200 Rh6DG046300 Rh6DG046400 Rh6DG046500 Rh6DG046700 Rh6DG046800
rosa_wichuraiana Rw0G000070 Rw6G005230 Rw6G005240 Rw6G005280 Rw6G005290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 303
Acc65I GGTACC 1 cut(s) 13
AccB1I GGYRCC 3 cut(s) 13, 92, 509
AccBSI CCGCTC 1 cut(s) 128
AccII CGCG 1 cut(s) 286
AccIII TCCGGA 1 cut(s) 254
AciI CCGC 6 cut(s) 11, 126, 286, 311, 368, 793
AclWI GGATC 3 cut(s) 213, 215, 228
AcoI YGGCCR 1 cut(s) 49
AcsI RAATTY 2 cut(s) 413, 807
AcvI CACGTG 1 cut(s) 602
AdeI CACNNNGTG 1 cut(s) 73
AfaI GTAC 3 cut(s) 15, 44, 522
AfiI CCNNNNNNNGG 1 cut(s) 902
AgsI TTSAA 7 cut(s) 22, 442, 518, 695, 721, 785, 928
AjnI CCWGG 2 cut(s) 636, 895
AluBI AGCT 8 cut(s) 100, 211, 307, 316, 572, 645, 717, 939
AluI AGCT 8 cut(s) 100, 211, 307, 316, 572, 645, 717, 939
Alw21I GWGCWC 1 cut(s) 69
Alw44I GTGCAC 1 cut(s) 65
AlwI GGATC 3 cut(s) 213, 215, 228
Aor13HI TCCGGA 1 cut(s) 254
AoxI GGCC 1 cut(s) 49
ApaLI GTGCAC 1 cut(s) 65
ApeKI GCWGC 2 cut(s) 304, 821
ApoI RAATTY 2 cut(s) 413, 807
Asp718I GGTACC 1 cut(s) 13
AspLEI GCGC 2 cut(s) 286, 304
AspS9I GGNCC 1 cut(s) 118
AsuHPI GGTGA 1 cut(s) 911
AsuNHI GCTAGC 1 cut(s) 307
AvaII GGWCC 1 cut(s) 118
BaeGI GKGCMC 2 cut(s) 69, 192
BamHI GGATCC 1 cut(s) 220
BanI GGYRCC 3 cut(s) 13, 92, 509
BauI CACGAG 1 cut(s) 53
BbrPI CACGTG 1 cut(s) 602
BbsI GAAGAC 1 cut(s) 762
Bbv12I GWGCWC 1 cut(s) 69
BbvI GCAGC 2 cut(s) 316, 808
BccI CCATC 2 cut(s) 347, 541
BceAI ACGGC 1 cut(s) 64
BcgI CGANNNNNNTGC 2 cut(s) 82, 116
BciT130I CCWGG 2 cut(s) 638, 897
BfaI CTAG 1 cut(s) 308
BisI GCNGC 2 cut(s) 305, 822
BlsI GCNGC 2 cut(s) 306, 823
BmcAI AGTACT 1 cut(s) 522
Bme1390I CCNGG 2 cut(s) 638, 897
Bme18I GGWCC 1 cut(s) 118
BmgT120I GGNCC 1 cut(s) 118
BmiI GGNNCC 5 cut(s) 15, 94, 112, 222, 511
BmrFI CCNGG 2 cut(s) 638, 897
BmrI ACTGGG 2 cut(s) 300, 798
BmsI GCATC 4 cut(s) 113, 271, 654, 811
BmtI GCTAGC 1 cut(s) 311
BmuI ACTGGG 2 cut(s) 300, 798
BpiI GAAGAC 1 cut(s) 762
BpmI CTGGAG 1 cut(s) 750
BsaAI YACGTR 2 cut(s) 342, 602
BsaJI CCNNGG 4 cut(s) 46, 114, 636, 895
BsaWI WCCGGW 1 cut(s) 254
Bsc4I CCNNNNNNNGG 1 cut(s) 902
Bse118I RCCGGY 1 cut(s) 89
Bse1I ACTGG 7 cut(s) 295, 505, 545, 733, 750, 764, 793
Bse3DI GCAATG 2 cut(s) 363, 585
BseAI TCCGGA 1 cut(s) 254
BseBI CCWGG 2 cut(s) 638, 897
BseDI CCNNGG 4 cut(s) 46, 114, 636, 895
BseGI GGATG 5 cut(s) 286, 358, 388, 409, 883
BseLI CCNNNNNNNGG 1 cut(s) 902
BseMI GCAATG 2 cut(s) 363, 585
BseMII CTCAG 1 cut(s) 672
BseNI ACTGG 7 cut(s) 295, 505, 545, 733, 750, 764, 793
BseRI GAGGAG 1 cut(s) 20
BseSI GKGCMC 2 cut(s) 69, 192
BseXI GCAGC 2 cut(s) 316, 808
BseYI CCCAGC 1 cut(s) 872
BsgI GTGCAG 1 cut(s) 70
Bsh1236I CGCG 1 cut(s) 286
BshFI GGCC 1 cut(s) 51
BshNI GGYRCC 3 cut(s) 13, 92, 509
BsiHKAI GWGCWC 1 cut(s) 69
BsiSI CCGG 3 cut(s) 90, 255, 350
BslFI GGGAC 1 cut(s) 370
BslI CCNNNNNNNGG 1 cut(s) 902
BsmFI GGGAC 1 cut(s) 370
BsnI GGCC 1 cut(s) 51
Bsp1286I GDGCHC 2 cut(s) 69, 192
Bsp13I TCCGGA 1 cut(s) 254
Bsp143I GATC 3 cut(s) 205, 220, 885
BspACI CCGC 6 cut(s) 11, 126, 286, 311, 368, 793
BspANI GGCC 1 cut(s) 51
BspCNI CTCAG 1 cut(s) 671
BspEI TCCGGA 1 cut(s) 254
BspFNI CGCG 1 cut(s) 286
BspLI GGNNCC 5 cut(s) 15, 94, 112, 222, 511
BspOI GCTAGC 1 cut(s) 311
BspPI GGATC 3 cut(s) 213, 215, 228
BspT107I GGYRCC 3 cut(s) 13, 92, 509
BsrBI CCGCTC 1 cut(s) 128
BsrDI GCAATG 2 cut(s) 363, 585
BsrFI RCCGGY 1 cut(s) 89
BsrI ACTGG 7 cut(s) 295, 505, 545, 733, 750, 764, 793
BssAI RCCGGY 1 cut(s) 89
BssECI CCNNGG 4 cut(s) 46, 114, 636, 895
BssMI GATC 3 cut(s) 205, 220, 885
BssSI CACGAG 1 cut(s) 53
Bst2BI CACGAG 1 cut(s) 53
Bst2UI CCWGG 2 cut(s) 638, 897
Bst4CI ACNGT 5 cut(s) 18, 268, 514, 799, 833
BstBAI YACGTR 2 cut(s) 342, 602
BstC8I GCNNGC 3 cut(s) 102, 231, 309
BstDEI CTNAG 2 cut(s) 317, 658
BstDSI CCRYGG 2 cut(s) 46, 114
BstENI CCTNNNNNAGG 1 cut(s) 900
BstF5I GGATG 5 cut(s) 286, 358, 388, 409, 883
BstFNI CGCG 1 cut(s) 286
BstHHI GCGC 2 cut(s) 286, 304
BstKTI GATC 3 cut(s) 208, 223, 888
BstMBI GATC 3 cut(s) 205, 220, 885
BstMWI GCNNNNNNNGC 6 cut(s) 145, 308, 313, 569, 673, 799
BstNI CCWGG 2 cut(s) 638, 897
BstNSI RCATGY 1 cut(s) 233
BstSCI CCNGG 2 cut(s) 636, 895
BstSLI GKGCMC 2 cut(s) 69, 192
BstSNI TACGTA 1 cut(s) 342
BstUI CGCG 1 cut(s) 286
BstV1I GCAGC 2 cut(s) 316, 808
BstV2I GAAGAC 1 cut(s) 762
BstX2I RGATCY 1 cut(s) 220
BstYI RGATCY 1 cut(s) 220
BsuRI GGCC 1 cut(s) 51
BtgI CCRYGG 2 cut(s) 46, 114
BtsCI GGATG 5 cut(s) 286, 358, 388, 409, 883
BtsI GCAGTG 1 cut(s) 246
BtsIMutI CAGTG 4 cut(s) 246, 552, 757, 838
Cac8I GCNNGC 3 cut(s) 102, 231, 309
CfoI GCGC 2 cut(s) 286, 304
Cfr10I RCCGGY 1 cut(s) 89
Cfr13I GGNCC 1 cut(s) 118
CseI GACGC 1 cut(s) 367
Csp6I GTAC 3 cut(s) 14, 43, 521
CviAII CATG 2 cut(s) 230, 826
CviQI GTAC 3 cut(s) 14, 43, 521
DdeI CTNAG 2 cut(s) 317, 658
DpnI GATC 3 cut(s) 207, 222, 887
DpnII GATC 3 cut(s) 205, 220, 885
DraIII CACNNNGTG 1 cut(s) 73
EaeI YGGCCR 1 cut(s) 49
EciI GGCGGA 1 cut(s) 808
Eco105I TACGTA 1 cut(s) 342
Eco32I GATATC 1 cut(s) 655
Eco47I GGWCC 1 cut(s) 118
Eco72I CACGTG 1 cut(s) 602
EcoNI CCTNNNNNAGG 1 cut(s) 900
EcoRII CCWGG 2 cut(s) 636, 895
EcoRV GATATC 1 cut(s) 655
FaeI CATG 2 cut(s) 233, 829
FaqI GGGAC 1 cut(s) 370
FatI CATG 2 cut(s) 229, 825
FauNDI CATATG 1 cut(s) 868
Fnu4HI GCNGC 2 cut(s) 305, 822
FokI GGATG 5 cut(s) 293, 365, 395, 416, 890
Fsp4HI GCNGC 2 cut(s) 305, 822
FspBI CTAG 1 cut(s) 308
FspI TGCGCA 1 cut(s) 303
GlaI GCGC 2 cut(s) 285, 303
GluI GCNGC 2 cut(s) 305, 822
GsaI CCCAGC 1 cut(s) 876
GsuI CTGGAG 1 cut(s) 750
HaeIII GGCC 1 cut(s) 51
HapII CCGG 3 cut(s) 90, 255, 350
HgaI GACGC 1 cut(s) 367
HhaI GCGC 2 cut(s) 286, 304
Hin1II CATG 2 cut(s) 233, 829
Hin6I GCGC 2 cut(s) 284, 302
HinP1I GCGC 2 cut(s) 284, 302
HindIII AAGCTT 1 cut(s) 715
HinfI GANTC 3 cut(s) 632, 695, 844
HpaII CCGG 3 cut(s) 90, 255, 350
HphI GGTGA 1 cut(s) 911
Hpy166II GTNNAC 3 cut(s) 67, 118, 550
Hpy188I TCNGA 3 cut(s) 132, 411, 661
Hpy188III TCNNGA 3 cut(s) 22, 255, 493
Hpy8I GTNNAC 3 cut(s) 67, 118, 550
HpyAV CCTTC 2 cut(s) 55, 896
HpyCH4III ACNGT 5 cut(s) 18, 268, 514, 799, 833
HpyCH4IV ACGT 2 cut(s) 341, 601
HpyCH4V TGCA 6 cut(s) 67, 87, 585, 590, 802, 866
HpyF10VI GCNNNNNNNGC 6 cut(s) 145, 308, 313, 569, 673, 799
HpyF3I CTNAG 2 cut(s) 317, 658
HpySE526I ACGT 2 cut(s) 341, 601
Hsp92II CATG 2 cut(s) 233, 829
HspAI GCGC 2 cut(s) 284, 302
Kpn2I TCCGGA 1 cut(s) 254
KpnI GGTACC 1 cut(s) 17
Kzo9I GATC 3 cut(s) 205, 220, 885
LmnI GCTCC 1 cut(s) 313
Lsp1109I GCAGC 2 cut(s) 316, 808
LweI GCATC 4 cut(s) 113, 271, 654, 811
MaeI CTAG 1 cut(s) 308
MaeII ACGT 2 cut(s) 341, 601
MalI GATC 3 cut(s) 207, 222, 887
MbiI CCGCTC 1 cut(s) 128
MboI GATC 3 cut(s) 205, 220, 885
MboII GAAGA 4 cut(s) 70, 481, 618, 767
MfeI CAATTG 1 cut(s) 591
MflI RGATCY 1 cut(s) 220
MhlI GDGCHC 2 cut(s) 69, 192
MluCI AATT 7 cut(s) 179, 413, 423, 442, 459, 591, 807
MnlI CCTC 6 cut(s) 38, 159, 177, 262, 426, 442
MroI TCCGGA 1 cut(s) 254
MseI TTAA 4 cut(s) 333, 417, 453, 540
MslI CAYNNNNRTG 1 cut(s) 557
MspA1I CMGCKG 2 cut(s) 211, 572
MspI CCGG 3 cut(s) 90, 255, 350
MspR9I CCNGG 2 cut(s) 638, 897
MunI CAATTG 1 cut(s) 591
MvaI CCWGG 2 cut(s) 638, 897
MvnI CGCG 1 cut(s) 286
MwoI GCNNNNNNNGC 6 cut(s) 145, 308, 313, 569, 673, 799
NdeI CATATG 1 cut(s) 868
NdeII GATC 3 cut(s) 205, 220, 885
NheI GCTAGC 1 cut(s) 307
NlaIII CATG 2 cut(s) 233, 829
NlaIV GGNNCC 5 cut(s) 15, 94, 112, 222, 511
NmeAIII GCCGAG 1 cut(s) 62
NsbI TGCGCA 1 cut(s) 303
NspI RCATGY 1 cut(s) 233
PaeI GCATGC 1 cut(s) 233
PfeI GAWTC 3 cut(s) 632, 695, 844
PkrI GCNGC 2 cut(s) 306, 823
PmaCI CACGTG 1 cut(s) 602
PmlI CACGTG 1 cut(s) 602
Ppu21I YACGTR 2 cut(s) 342, 602
Psp6I CCWGG 2 cut(s) 636, 895
PspCI CACGTG 1 cut(s) 602
PspFI CCCAGC 1 cut(s) 872
PspGI CCWGG 2 cut(s) 636, 895
PspN4I GGNNCC 5 cut(s) 15, 94, 112, 222, 511
PspPI GGNCC 1 cut(s) 118
PsuI RGATCY 1 cut(s) 220
PvuII CAGCTG 2 cut(s) 211, 572
RsaI GTAC 3 cut(s) 15, 44, 522
RsaNI GTAC 3 cut(s) 14, 43, 521
RseI CAYNNNNRTG 1 cut(s) 557
SaqAI TTAA 4 cut(s) 333, 417, 453, 540
SatI GCNGC 2 cut(s) 305, 822
Sau3AI GATC 3 cut(s) 205, 220, 885
Sau96I GGNCC 1 cut(s) 118
ScaI AGTACT 1 cut(s) 522
ScrFI CCNGG 2 cut(s) 638, 897
SduI GDGCHC 2 cut(s) 69, 192
SfaNI GCATC 4 cut(s) 113, 271, 654, 811
SinI GGWCC 1 cut(s) 118
SmiMI CAYNNNNRTG 1 cut(s) 557
SnaBI TACGTA 1 cut(s) 342
SphI GCATGC 1 cut(s) 233
Sse9I AATT 7 cut(s) 179, 413, 423, 442, 459, 591, 807
SsiI CCGC 6 cut(s) 11, 126, 286, 311, 368, 793
SspMI CTAG 1 cut(s) 308
StyD4I CCNGG 2 cut(s) 636, 895
TaaI ACNGT 5 cut(s) 18, 268, 514, 799, 833
TaiI ACGT 2 cut(s) 344, 604
TaqI TCGA 1 cut(s) 935
TasI AATT 7 cut(s) 179, 413, 423, 442, 459, 591, 807
TatI WGTACW 1 cut(s) 520
TfiI GAWTC 3 cut(s) 632, 695, 844
Tru1I TTAA 4 cut(s) 333, 417, 453, 540
Tru9I TTAA 4 cut(s) 333, 417, 453, 540
TscAI CASTG 4 cut(s) 253, 552, 757, 838
TseI GCWGC 2 cut(s) 304, 821
TspDTI ATGAA 3 cut(s) 402, 471, 842
TspGWI ACGGA 3 cut(s) 103, 168, 209
TspRI CASTG 4 cut(s) 253, 552, 757, 838
VneI GTGCAC 1 cut(s) 65
VpaK11BI GGWCC 1 cut(s) 118
XagI CCTNNNNNAGG 1 cut(s) 900
XapI RAATTY 2 cut(s) 413, 807
XceI RCATGY 1 cut(s) 233
XcmI CCANNNNNNNNNTGG 1 cut(s) 832
XspI CTAG 1 cut(s) 308
ZrmI AGTACT 1 cut(s) 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.