Rmu_sc0005439.1_g000007

histone deacetylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005439.1
OG0000538
Physical Location & Seq
Forward (+)
23358 .. 25827
2470 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005439.1_g000007.1.cds

Sequence Viewer

Length: 1524 bp
atggcgatcaagcgcctccgaaccaagtggactccgattcagcgcgaaacgctcgagaaggcctattcagtggagaggaccccatcggaggcgacgaaggaggagctatcgaagcagttagagctcgggtatgagcaggtcacggtttggttcatgaaccgaagggccaaggatcgcaggcaggggattgtggccaagaaatcgagaatgactcgtcatcaggttgcgactctcgagaagacctatgccgcggagaagaatccgtcggtgtcgaagagggaggagcttgggaagaaggtggggctaactgagattcaggtgaggctgtggtacaacaagaagagatttgaggatcaggggaaggagaggaaggagaagaagaagcggggtaccggggccaagaagccaccgaaatcggcactggcttcgtcctgtgatcacctggctttcgtgtcggctgacctcactggcattcccaatcctgacagtccctgcaaaagttatactagatgccagaatcccaatgagaactggtgttgtttgtgctgcaaggatgtgttctgtagtgttgatttgatgaacgggcacttgtttcagcattttaagcagacaaatcattgtcttgctgtcagctgcagtgataaatcaatttggtgctactcctgcaattcattcttagatgctcaggcaattccacaattgagtgctttttcatcatcctccaatgcttccagggagccatcatcctcatccaggctagagagccctgatgcctctaaggattcatcctcctcatccaggctagagaacctcgatgctctgatggttgatgttaccgatctcatatccaagccatctccgtgccccagttttcatccactggatgataactcatttgtcgaccaggataagcttgcattagccaagaagggactccagaagatctttgattgtggtttagaagctttagccgatccccatgtacaagaagagtttctttcttattcagccacagttctatcagtcgattcatgcccatcagagttgaagaccattctttcttctttcagaggcaatctctcagaggagaccattgctttcctccaagctcaacatgagttgaaggtggcctccgacctagcagcctcgattactgagagaaggtttgttctccgttatcatcattcgaagtatgctgaggtgaagaaacaaattattgcctcagatgagaaagttgcgaaccttaaggccatgatcaaaaggttggaagcttctttggctgaagaaaagagcaacagagagaagattgatcgggttttggattctatcgagacaggagtaatggatgctagagatggattgctctctgatatagaacaagtgtctgccatggagggaacaaccaaagcagccaaccagttagtagctcaacgccagtcagcgtgggagaacctaaggaatacttttacagaggtatatagtaatctgcatgcaggggaacaacatgctgaacccaccagttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-UBP

Protein Analysis

507

Amino Acids

56.86

Weight (kDa)

8.24

Isoelectric Point (pI)

42.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000538)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04050 FvH4_2g04050 FvH4_2g04050 FvH4_2g04050 FvH4_2g04050
rosa_chinensis RchiOBHm_Chr6g0253231 RchiOBHm_Chr6g0253251 RchiOBHm_Chr6g0253261 RchiOBHm_Chr6g0253271 RchiOBHm_Chr6g0253291 RchiOBHm_Chr6g0253321 RchiOBHm_Chr6g0253331 RchiOBHm_Chr6g0253341 RchiOBHm_Chr6g0253371 RchiOBHm_Chr6g0253401
rosa_laevigata RLG00000015022 RLG00000015023 RLG00000015024 RLG00000015027 RLG00000015028 RLG00000015030 RLG00000015031 RLG00000015034 RLG00000015035 RLG00000015038 RLG00000015041
rosa_multiflora Rmu_sc0001257.1_g000004 Rmu_sc0001257.1_g000008 Rmu_sc0001257.1_g000014 Rmu_sc0001257.1_g000016 Rmu_sc0001257.1_g000019 Rmu_sc0001257.1_g000026 Rmu_sc0002560.1_g000013 Rmu_sc0002560.1_g000020 Rmu_sc0002560.1_g000021 Rmu_sc0003855.1_g000005 Rmu_sc0003855.1_g000011 Rmu_sc0003898.1_g000003 Rmu_sc0003898.1_g000005 Rmu_sc0003898.1_g000016 Rmu_sc0003898.1_g000017 Rmu_sc0005439.1_g000007 Rmu_sc0005439.1_g000014 Rmu_sc0005439.1_g000021
rosa_roxburghii Rroxscaffold_7G00211930 Rroxscaffold_7G00211940 Rroxscaffold_7G00211960 Rroxscaffold_7G00211980 Rroxscaffold_7G00211990 Rroxscaffold_7G00212000 Rroxscaffold_7G00212050 Rroxscaffold_7G00212060 Rroxscaffold_7G00212070 Rroxscaffold_7G00212080 Rroxscaffold_7G00212160
rosa_rugosa Rorug05G0542900 Rorug05G0542900 Rorug05G0543000 Rorug05G0543100 Rorug05G0543100 Rorug05G0543200 Rorug05G0543300 Rorug05G0543400 Rorug05G0543400 Rorug05G0543500 Rorug05G0543600 Rorug05G0543700
rosa_samantha Rh6CG050000 Rh6DG045200 Rh6DG045500 Rh6DG045600 Rh6DG045700 Rh6DG045800 Rh6DG046200 Rh6DG046300 Rh6DG046400 Rh6DG046500 Rh6DG046700 Rh6DG046800
rosa_wichuraiana Rw0G000070 Rw6G005230 Rw6G005240 Rw6G005280 Rw6G005290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 127
Acc65I GGTACC 1 cut(s) 389
AccB1I GGYRCC 1 cut(s) 389
AccI GTMKAC 1 cut(s) 900
AccII CGCG 2 cut(s) 45, 251
AciI CCGC 3 cut(s) 249, 251, 385
AclWI GGATC 3 cut(s) 180, 360, 968
AcoI YGGCCR 1 cut(s) 192
AcuI CTGAAG 1 cut(s) 1302
AfaI GTAC 3 cut(s) 332, 391, 984
AfiI CCNNNNNNNGG 3 cut(s) 88, 753, 798
AflII CTTAAG 1 cut(s) 1244
AgsI TTSAA 2 cut(s) 1048, 1123
AjnI CCWGG 5 cut(s) 441, 731, 752, 797, 903
AluBI AGCT 9 cut(s) 106, 124, 286, 633, 913, 965, 1109, 1271, 1427
AluI AGCT 9 cut(s) 106, 124, 286, 633, 913, 965, 1109, 1271, 1427
Alw21I GWGCWC 1 cut(s) 126
Alw26I GTCTC 2 cut(s) 1082, 1325
AlwI GGATC 3 cut(s) 180, 360, 968
AlwNI CAGNNNCTG 1 cut(s) 492
Ama87I CYCGRG 3 cut(s) 53, 125, 233
AoxI GGCC 6 cut(s) 60, 165, 192, 396, 1128, 1248
ApeKI GCWGC 4 cut(s) 546, 633, 1142, 1409
Asp700I GAANNNNTTC 1 cut(s) 993
Asp718I GGTACC 1 cut(s) 389
AspLEI GCGC 2 cut(s) 15, 45
AspS9I GGNCC 3 cut(s) 78, 165, 396
AsuC2I CCSGG 1 cut(s) 394
AsuHPI GGTGA 3 cut(s) 331, 431, 1213
AsuII TTCGAA 1 cut(s) 1187
AvaI CYCGRG 3 cut(s) 53, 125, 233
AvaII GGWCC 1 cut(s) 78
AxyI CCTNAGG 1 cut(s) 1454
BaeGI GKGCMC 2 cut(s) 588, 866
BalI TGGCCA 1 cut(s) 194
BanI GGYRCC 1 cut(s) 389
BanII GRGCYC 2 cut(s) 126, 767
BbsI GAAGAC 2 cut(s) 245, 1055
Bbv12I GWGCWC 1 cut(s) 126
BbvCI CCTCAGC 1 cut(s) 1197
BbvI GCAGC 4 cut(s) 533, 620, 1154, 1421
BccI CCATC 6 cut(s) 91, 748, 817, 862, 1045, 1349
BcgI CGANNNNNNTGC 2 cut(s) 408, 442
BciT130I CCWGG 5 cut(s) 443, 733, 754, 799, 905
BclI TGATCA 2 cut(s) 436, 1254
BcnI CCSGG 1 cut(s) 394
BcoDI GTCTC 2 cut(s) 1082, 1325
BfaI CTAG 5 cut(s) 507, 758, 803, 1139, 1350
BfmI CTRYAG 2 cut(s) 562, 634
BfoI RGCGCY 1 cut(s) 16
BfrI CTTAAG 1 cut(s) 1244
BfuAI ACCTGC 1 cut(s) 127
BglII AGATCT 1 cut(s) 942
BisI GCNGC 5 cut(s) 249, 547, 634, 1143, 1410
BlsI GCNGC 5 cut(s) 250, 548, 635, 1144, 1411
Bme1390I CCNGG 6 cut(s) 394, 443, 733, 754, 799, 905
Bme18I GGWCC 1 cut(s) 78
BmeT110I CYCGRG 3 cut(s) 53, 125, 233
BmgT120I GGNCC 3 cut(s) 78, 165, 396
BmiI GGNNCC 4 cut(s) 80, 391, 397, 738
BmrFI CCNGG 6 cut(s) 394, 443, 733, 754, 799, 905
BmrI ACTGGG 1 cut(s) 861
BmsI GCATC 5 cut(s) 500, 670, 760, 805, 1336
BmuI ACTGGG 1 cut(s) 861
BpiI GAAGAC 2 cut(s) 245, 1055
BplI GAGNNNNNCTC 4 cut(s) 196, 228, 1062, 1094
BpmI CTGGAG 1 cut(s) 920
Bpu10I CCTNAGC 2 cut(s) 684, 1197
Bpu14I TTCGAA 1 cut(s) 1187
BpuMI CCSGG 1 cut(s) 394
BsaI GGTCTC 1 cut(s) 1082
BsaJI CCNNGG 5 cut(s) 168, 249, 393, 732, 1389
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 753, 798
Bse1I ACTGG 8 cut(s) 426, 472, 536, 867, 885, 1417, 1435, 1518
Bse21I CCTNAGG 1 cut(s) 1454
Bse3DI GCAATG 1 cut(s) 1092
BseBI CCWGG 5 cut(s) 443, 733, 754, 799, 905
BseDI CCNNGG 5 cut(s) 168, 249, 393, 732, 1389
BseGI GGATG 9 cut(s) 559, 716, 743, 749, 785, 794, 874, 889, 1351
BseLI CCNNNNNNNGG 3 cut(s) 88, 753, 798
BseMI GCAATG 1 cut(s) 1092
BseMII CTCAG 6 cut(s) 300, 698, 1095, 1146, 1188, 1236
BseNI ACTGG 8 cut(s) 426, 472, 536, 867, 885, 1417, 1435, 1518
BseRI GAGGAG 4 cut(s) 116, 296, 781, 1100
BseSI GKGCMC 2 cut(s) 588, 866
BseXI GCAGC 4 cut(s) 533, 620, 1154, 1421
Bsh1236I CGCG 2 cut(s) 45, 251
BshFI GGCC 6 cut(s) 62, 167, 194, 398, 1130, 1250
BshNI GGYRCC 1 cut(s) 389
BsiHKAI GWGCWC 1 cut(s) 126
BsiHKCI CYCGRG 3 cut(s) 53, 125, 233
BsiSI CCGG 1 cut(s) 393
BslFI GGGAC 2 cut(s) 474, 945
BslI CCNNNNNNNGG 3 cut(s) 88, 753, 798
BsmAI GTCTC 2 cut(s) 1082, 1325
BsmFI GGGAC 2 cut(s) 474, 945
BsmI GAATGC 1 cut(s) 471
BsnI GGCC 6 cut(s) 62, 167, 194, 398, 1130, 1250
Bso31I GGTCTC 1 cut(s) 1082
BsoBI CYCGRG 3 cut(s) 53, 125, 233
Bsp119I TTCGAA 1 cut(s) 1187
Bsp1286I GDGCHC 4 cut(s) 126, 588, 767, 866
Bsp1407I TGTACA 1 cut(s) 982
Bsp143I GATC 9 cut(s) 6, 172, 352, 436, 838, 942, 973, 1254, 1309
Bsp19I CCATGG 1 cut(s) 1389
BspACI CCGC 3 cut(s) 249, 251, 385
BspANI GGCC 6 cut(s) 62, 167, 194, 398, 1130, 1250
BspCNI CTCAG 6 cut(s) 301, 697, 1094, 1147, 1189, 1235
BspFNI CGCG 2 cut(s) 45, 251
BspHI TCATGA 1 cut(s) 153
BspLI GGNNCC 4 cut(s) 80, 391, 397, 738
BspMAI CTGCAG 1 cut(s) 638
BspMI ACCTGC 1 cut(s) 127
BspPI GGATC 3 cut(s) 180, 360, 968
BspT104I TTCGAA 1 cut(s) 1187
BspT107I GGYRCC 1 cut(s) 389
BspTI CTTAAG 1 cut(s) 1244
BspTNI GGTCTC 1 cut(s) 1082
BsrDI GCAATG 1 cut(s) 1092
BsrGI TGTACA 1 cut(s) 982
BsrI ACTGG 8 cut(s) 426, 472, 536, 867, 885, 1417, 1435, 1518
BssECI CCNNGG 5 cut(s) 168, 249, 393, 732, 1389
BssMI GATC 9 cut(s) 6, 172, 352, 436, 838, 942, 973, 1254, 1309
BssT1I CCWWGG 2 cut(s) 168, 1389
Bst2UI CCWGG 5 cut(s) 443, 733, 754, 799, 905
Bst4CI ACNGT 3 cut(s) 145, 488, 1015
Bst6I CTCTTC 3 cut(s) 269, 335, 984
BstAFI CTTAAG 1 cut(s) 1244
BstAUI TGTACA 1 cut(s) 982
BstBI TTCGAA 1 cut(s) 1187
BstC8I GCNNGC 3 cut(s) 179, 915, 1491
BstDEI CTNAG 9 cut(s) 309, 676, 684, 777, 1081, 1155, 1197, 1222, 1454
BstDSI CCRYGG 2 cut(s) 249, 1389
BstENI CCTNNNNNAGG 2 cut(s) 751, 796
BstF5I GGATG 9 cut(s) 559, 716, 743, 749, 785, 794, 874, 889, 1351
BstFNI CGCG 2 cut(s) 45, 251
BstH2I RGCGCY 1 cut(s) 16
BstHHI GCGC 2 cut(s) 15, 45
BstKTI GATC 9 cut(s) 9, 175, 355, 439, 841, 945, 976, 1257, 1312
BstMAI GTCTC 2 cut(s) 1082, 1325
BstMBI GATC 9 cut(s) 6, 172, 352, 436, 838, 942, 973, 1254, 1309
BstMWI GCNNNNNNNGC 6 cut(s) 49, 112, 121, 604, 663, 1277
BstNI CCWGG 5 cut(s) 443, 733, 754, 799, 905
BstNSI RCATGY 2 cut(s) 1493, 1508
BstSCI CCNGG 6 cut(s) 392, 441, 731, 752, 797, 903
BstSFI CTRYAG 2 cut(s) 562, 634
BstSLI GKGCMC 2 cut(s) 588, 866
BstUI CGCG 2 cut(s) 45, 251
BstV1I GCAGC 4 cut(s) 533, 620, 1154, 1421
BstV2I GAAGAC 2 cut(s) 245, 1055
BstX2I RGATCY 1 cut(s) 942
BstYI RGATCY 1 cut(s) 942
Bsu36I CCTNAGG 1 cut(s) 1454
BsuRI GGCC 6 cut(s) 62, 167, 194, 398, 1130, 1250
BtgI CCRYGG 2 cut(s) 249, 1389
BtsCI GGATG 9 cut(s) 559, 716, 743, 749, 785, 794, 874, 889, 1351
BtsI GCAGTG 1 cut(s) 643
BtsIMutI CAGTG 5 cut(s) 75, 419, 465, 643, 878
BveI ACCTGC 1 cut(s) 127
Cac8I GCNNGC 3 cut(s) 179, 915, 1491
CaiI CAGNNNCTG 1 cut(s) 492
CciI TCATGA 1 cut(s) 153
CfoI GCGC 2 cut(s) 15, 45
Cfr13I GGNCC 3 cut(s) 78, 165, 396
Cfr42I CCGCGG 1 cut(s) 252
Csp6I GTAC 3 cut(s) 331, 390, 983
CviAII CATG 8 cut(s) 154, 980, 1032, 1115, 1252, 1390, 1490, 1505
CviQI GTAC 3 cut(s) 331, 390, 983
DdeI CTNAG 9 cut(s) 309, 676, 684, 777, 1081, 1155, 1197, 1222, 1454
DpnI GATC 9 cut(s) 8, 174, 354, 438, 840, 944, 975, 1256, 1311
DpnII GATC 9 cut(s) 6, 172, 352, 436, 838, 942, 973, 1254, 1309
EaeI YGGCCR 1 cut(s) 192
Eam1104I CTCTTC 3 cut(s) 269, 335, 984
EarI CTCTTC 3 cut(s) 269, 335, 984
Ecl136II GAGCTC 1 cut(s) 124
Eco130I CCWWGG 2 cut(s) 168, 1389
Eco147I AGGCCT 1 cut(s) 62
Eco24I GRGCYC 2 cut(s) 126, 767
Eco31I GGTCTC 1 cut(s) 1082
Eco47I GGWCC 1 cut(s) 78
Eco53kI GAGCTC 1 cut(s) 124
Eco57I CTGAAG 1 cut(s) 1302
Eco81I CCTNAGG 1 cut(s) 1454
Eco88I CYCGRG 3 cut(s) 53, 125, 233
EcoICRI GAGCTC 1 cut(s) 124
EcoNI CCTNNNNNAGG 2 cut(s) 751, 796
EcoO109I RGGNCCY 1 cut(s) 78
EcoRII CCWGG 5 cut(s) 441, 731, 752, 797, 903
EcoT14I CCWWGG 2 cut(s) 168, 1389
EcoT38I GRGCYC 2 cut(s) 126, 767
ErhI CCWWGG 2 cut(s) 168, 1389
FaeI CATG 8 cut(s) 157, 983, 1035, 1118, 1255, 1393, 1493, 1508
FalI AAGNNNNNCTT 4 cut(s) 981, 1013, 1447, 1479
FaqI GGGAC 2 cut(s) 474, 945
FatI CATG 8 cut(s) 153, 979, 1031, 1114, 1251, 1389, 1489, 1504
FauI CCCGC 1 cut(s) 378
FbaI TGATCA 2 cut(s) 436, 1254
FblI GTMKAC 1 cut(s) 900
Fnu4HI GCNGC 5 cut(s) 249, 547, 634, 1143, 1410
FokI GGATG 9 cut(s) 566, 703, 730, 736, 772, 781, 861, 896, 1358
FriOI GRGCYC 2 cut(s) 126, 767
Fsp4HI GCNGC 5 cut(s) 249, 547, 634, 1143, 1410
FspBI CTAG 5 cut(s) 507, 758, 803, 1139, 1350
GlaI GCGC 2 cut(s) 14, 44
GluI GCNGC 5 cut(s) 249, 547, 634, 1143, 1410
GsuI CTGGAG 1 cut(s) 920
HaeII RGCGCY 1 cut(s) 16
HaeIII GGCC 6 cut(s) 62, 167, 194, 398, 1130, 1250
HapII CCGG 1 cut(s) 393
HhaI GCGC 2 cut(s) 15, 45
Hin1II CATG 8 cut(s) 157, 983, 1035, 1118, 1255, 1393, 1493, 1508
Hin6I GCGC 2 cut(s) 13, 43
HinP1I GCGC 2 cut(s) 13, 43
HincII GTYRAC 1 cut(s) 901
HindII GTYRAC 1 cut(s) 901
HindIII AAGCTT 3 cut(s) 911, 963, 1269
HpaII CCGG 1 cut(s) 393
HphI GGTGA 3 cut(s) 331, 431, 1213
Hpy166II GTNNAC 2 cut(s) 30, 901
Hpy188III TCNNGA 8 cut(s) 55, 154, 204, 233, 235, 482, 937, 1330
Hpy8I GTNNAC 2 cut(s) 30, 901
Hpy99I CGWCG 2 cut(s) 97, 268
HpyAV CCTTC 9 cut(s) 52, 91, 156, 289, 355, 364, 922, 1117, 1155
HpyCH4III ACNGT 3 cut(s) 145, 488, 1015
HpyCH4V TGCA 7 cut(s) 495, 549, 636, 666, 917, 1489, 1493
HpyF10VI GCNNNNNNNGC 6 cut(s) 49, 112, 121, 604, 663, 1277
HpyF3I CTNAG 9 cut(s) 309, 676, 684, 777, 1081, 1155, 1197, 1222, 1454
Hsp92II CATG 8 cut(s) 157, 983, 1035, 1118, 1255, 1393, 1493, 1508
HspAI GCGC 2 cut(s) 13, 43
KpnI GGTACC 1 cut(s) 393
Ksp22I TGATCA 2 cut(s) 436, 1254
KspI CCGCGG 1 cut(s) 252
Kzo9I GATC 9 cut(s) 6, 172, 352, 436, 838, 942, 973, 1254, 1309
LmnI GCTCC 3 cut(s) 103, 283, 736
Lsp1109I GCAGC 4 cut(s) 533, 620, 1154, 1421
LweI GCATC 5 cut(s) 500, 670, 760, 805, 1336
MaeI CTAG 5 cut(s) 507, 758, 803, 1139, 1350
MaeIII GTNAC 2 cut(s) 139, 832
MalI GATC 9 cut(s) 8, 174, 354, 438, 840, 944, 975, 1256, 1311
MboI GATC 9 cut(s) 6, 172, 352, 436, 838, 942, 973, 1254, 1309
MfeI CAATTG 1 cut(s) 698
MflI RGATCY 1 cut(s) 942
MhlI GDGCHC 4 cut(s) 126, 588, 767, 866
MlsI TGGCCA 1 cut(s) 194
MluCI AATT 5 cut(s) 648, 667, 690, 698, 1212
MluNI TGGCCA 1 cut(s) 194
MlyI GAGTC 4 cut(s) 25, 205, 223, 927
MmeI TCCRAC 2 cut(s) 1158, 1245
Mox20I TGGCCA 1 cut(s) 194
MroXI GAANNNNTTC 1 cut(s) 993
MscI TGGCCA 1 cut(s) 194
MseI TTAA 3 cut(s) 603, 1245, 1522
MslI CAYNNNNRTG 1 cut(s) 859
Msp20I TGGCCA 1 cut(s) 194
MspA1I CMGCKG 2 cut(s) 251, 633
MspCI CTTAAG 1 cut(s) 1244
MspI CCGG 1 cut(s) 393
MspR9I CCNGG 6 cut(s) 394, 443, 733, 754, 799, 905
MunI CAATTG 1 cut(s) 698
Mva1269I GAATGC 1 cut(s) 471
MvaI CCWGG 5 cut(s) 443, 733, 754, 799, 905
MvnI CGCG 2 cut(s) 45, 251
MwoI GCNNNNNNNGC 6 cut(s) 49, 112, 121, 604, 663, 1277
NciI CCSGG 1 cut(s) 394
NcoI CCATGG 1 cut(s) 1389
NdeII GATC 9 cut(s) 6, 172, 352, 436, 838, 942, 973, 1254, 1309
NlaIII CATG 8 cut(s) 157, 983, 1035, 1118, 1255, 1393, 1493, 1508
NlaIV GGNNCC 4 cut(s) 80, 391, 397, 738
NmuCI GTSAC 1 cut(s) 139
NspI RCATGY 2 cut(s) 1493, 1508
NspV TTCGAA 1 cut(s) 1187
PaeI GCATGC 1 cut(s) 1493
PaeR7I CTCGAG 2 cut(s) 53, 233
PagI TCATGA 1 cut(s) 153
PceI AGGCCT 1 cut(s) 62
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PctI GAATGC 1 cut(s) 471
PdmI GAANNNNTTC 1 cut(s) 993
PfeI GAWTC 7 cut(s) 37, 259, 313, 517, 782, 1028, 1322
PkrI GCNGC 5 cut(s) 250, 548, 635, 1144, 1411
PleI GAGTC 4 cut(s) 25, 205, 223, 927
PpsI GAGTC 4 cut(s) 25, 205, 223, 927
PpuMI RGGWCCY 1 cut(s) 78
Psp124BI GAGCTC 1 cut(s) 126
Psp5II RGGWCCY 1 cut(s) 78
Psp6I CCWGG 5 cut(s) 441, 731, 752, 797, 903
PspGI CCWGG 5 cut(s) 441, 731, 752, 797, 903
PspN4I GGNNCC 4 cut(s) 80, 391, 397, 738
PspPI GGNCC 3 cut(s) 78, 165, 396
PspPPI RGGWCCY 1 cut(s) 78
PstI CTGCAG 1 cut(s) 638
PstNI CAGNNNCTG 1 cut(s) 492
PsuI RGATCY 1 cut(s) 942
PvuII CAGCTG 1 cut(s) 633
RsaI GTAC 3 cut(s) 332, 391, 984
RsaNI GTAC 3 cut(s) 331, 390, 983
RseI CAYNNNNRTG 1 cut(s) 859
SacI GAGCTC 1 cut(s) 126
SacII CCGCGG 1 cut(s) 252
SalI GTCGAC 1 cut(s) 899
SaqAI TTAA 3 cut(s) 603, 1245, 1522
SatI GCNGC 5 cut(s) 249, 547, 634, 1143, 1410
Sau3AI GATC 9 cut(s) 6, 172, 352, 436, 838, 942, 973, 1254, 1309
Sau96I GGNCC 3 cut(s) 78, 165, 396
SchI GAGTC 4 cut(s) 25, 205, 223, 927
ScrFI CCNGG 6 cut(s) 394, 443, 733, 754, 799, 905
SduI GDGCHC 4 cut(s) 126, 588, 767, 866
SfaNI GCATC 5 cut(s) 500, 670, 760, 805, 1336
SfcI CTRYAG 2 cut(s) 562, 634
Sfr274I CTCGAG 2 cut(s) 53, 233
Sfr303I CCGCGG 1 cut(s) 252
SfuI TTCGAA 1 cut(s) 1187
SgrBI CCGCGG 1 cut(s) 252
SinI GGWCC 1 cut(s) 78
SlaI CTCGAG 2 cut(s) 53, 233
SmiMI CAYNNNNRTG 1 cut(s) 859
SmlI CTYRAG 3 cut(s) 53, 233, 1244
SmoI CTYRAG 3 cut(s) 53, 233, 1244
SphI GCATGC 1 cut(s) 1493
Sse9I AATT 5 cut(s) 648, 667, 690, 698, 1212
SseBI AGGCCT 1 cut(s) 62
SsiI CCGC 3 cut(s) 249, 251, 385
SspMI CTAG 5 cut(s) 507, 758, 803, 1139, 1350
SstI GAGCTC 1 cut(s) 126
StuI AGGCCT 1 cut(s) 62
StyD4I CCNGG 6 cut(s) 392, 441, 731, 752, 797, 903
StyI CCWWGG 2 cut(s) 168, 1389
TaaI ACNGT 3 cut(s) 145, 488, 1015
TasI AATT 5 cut(s) 648, 667, 690, 698, 1212
TatI WGTACW 1 cut(s) 982
TauI GCSGC 1 cut(s) 251
TfiI GAWTC 7 cut(s) 37, 259, 313, 517, 782, 1028, 1322
Tru1I TTAA 3 cut(s) 603, 1245, 1522
Tru9I TTAA 3 cut(s) 603, 1245, 1522
TscAI CASTG 5 cut(s) 75, 426, 472, 643, 885
TseFI GTSAC 1 cut(s) 139
TseI GCWGC 4 cut(s) 546, 633, 1142, 1409
Tsp45I GTSAC 1 cut(s) 139
TspDTI ATGAA 8 cut(s) 142, 170, 593, 660, 702, 774, 863, 1020
TspGWI ACGGA 3 cut(s) 252, 849, 1163
TspRI CASTG 5 cut(s) 75, 426, 472, 643, 885
Vha464I CTTAAG 1 cut(s) 1244
VpaK11BI GGWCC 1 cut(s) 78
XagI CCTNNNNNAGG 2 cut(s) 751, 796
XceI RCATGY 2 cut(s) 1493, 1508
XhoI CTCGAG 2 cut(s) 53, 233
XmiI GTMKAC 1 cut(s) 900
XmnI GAANNNNTTC 1 cut(s) 993
XspI CTAG 5 cut(s) 507, 758, 803, 1139, 1350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.