histone deacetylase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 274 |
| AgsI | TTSAA | 3 cut(s) | 223, 288, 346 |
| AjnI | CCWGG | 1 cut(s) | 87 |
| AluBI | AGCT | 4 cut(s) | 97, 152, 158, 209 |
| AluI | AGCT | 4 cut(s) | 97, 152, 158, 209 |
| AoxI | GGCC | 3 cut(s) | 85, 228, 348 |
| AsuHPI | GGTGA | 1 cut(s) | 313 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 162, 194 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 317, 351 |
| BciT130I | CCWGG | 1 cut(s) | 89 |
| BfaI | CTAG | 2 cut(s) | 42, 155 |
| BglII | AGATCT | 1 cut(s) | 129 |
| BisI | GCNGC | 1 cut(s) | 275 |
| BlsI | GCNGC | 1 cut(s) | 276 |
| Bme1390I | CCNGG | 1 cut(s) | 89 |
| BmrFI | CCNGG | 1 cut(s) | 89 |
| BmsI | GCATC | 2 cut(s) | 54, 58 |
| Bpu10I | CCTNAGC | 1 cut(s) | 108 |
| BpuEI | CTTGAG | 1 cut(s) | 195 |
| BsaJI | CCNNGG | 1 cut(s) | 321 |
| BsaWI | WCCGGW | 1 cut(s) | 163 |
| BseBI | CCWGG | 1 cut(s) | 89 |
| BseDI | CCNNGG | 1 cut(s) | 321 |
| BseGI | GGATG | 3 cut(s) | 55, 73, 97 |
| BseMII | CTCAG | 3 cut(s) | 63, 246, 269 |
| BshFI | GGCC | 3 cut(s) | 87, 230, 350 |
| BsiSI | CCGG | 1 cut(s) | 164 |
| BslFI | GGGAC | 1 cut(s) | 133 |
| BsmFI | GGGAC | 1 cut(s) | 133 |
| BsnI | GGCC | 3 cut(s) | 87, 230, 350 |
| Bsp143I | GATC | 3 cut(s) | 19, 129, 354 |
| BspACI | CCGC | 1 cut(s) | 274 |
| BspANI | GGCC | 3 cut(s) | 87, 230, 350 |
| BspCNI | CTCAG | 3 cut(s) | 64, 245, 268 |
| BssECI | CCNNGG | 1 cut(s) | 321 |
| BssMI | GATC | 3 cut(s) | 19, 129, 354 |
| BssT1I | CCWWGG | 1 cut(s) | 321 |
| Bst2UI | CCWGG | 1 cut(s) | 89 |
| Bst4CI | ACNGT | 1 cut(s) | 63 |
| BstC8I | GCNNGC | 1 cut(s) | 99 |
| BstDEI | CTNAG | 5 cut(s) | 30, 72, 108, 232, 255 |
| BstF5I | GGATG | 3 cut(s) | 55, 73, 97 |
| BstKTI | GATC | 3 cut(s) | 22, 132, 357 |
| BstMBI | GATC | 3 cut(s) | 19, 129, 354 |
| BstNI | CCWGG | 1 cut(s) | 89 |
| BstSCI | CCNGG | 1 cut(s) | 87 |
| BstX2I | RGATCY | 1 cut(s) | 129 |
| BstYI | RGATCY | 1 cut(s) | 129 |
| BsuRI | GGCC | 3 cut(s) | 87, 230, 350 |
| BtsCI | GGATG | 3 cut(s) | 55, 73, 97 |
| Cac8I | GCNNGC | 1 cut(s) | 99 |
| CviAII | CATG | 1 cut(s) | 352 |
| DdeI | CTNAG | 5 cut(s) | 30, 72, 108, 232, 255 |
| DpnI | GATC | 3 cut(s) | 21, 131, 356 |
| DpnII | GATC | 3 cut(s) | 19, 129, 354 |
| DraI | TTTAAA | 1 cut(s) | 147 |
| Eco130I | CCWWGG | 1 cut(s) | 321 |
| EcoRII | CCWGG | 1 cut(s) | 87 |
| EcoT14I | CCWWGG | 1 cut(s) | 321 |
| ErhI | CCWWGG | 1 cut(s) | 321 |
| FaeI | CATG | 1 cut(s) | 355 |
| FaiI | YATR | 3 cut(s) | 172, 294, 353 |
| FaqI | GGGAC | 1 cut(s) | 133 |
| FatI | CATG | 1 cut(s) | 351 |
| Fnu4HI | GCNGC | 1 cut(s) | 275 |
| FokI | GGATG | 3 cut(s) | 42, 80, 104 |
| Fsp4HI | GCNGC | 1 cut(s) | 275 |
| FspBI | CTAG | 2 cut(s) | 42, 155 |
| GluI | GCNGC | 1 cut(s) | 275 |
| HaeIII | GGCC | 3 cut(s) | 87, 230, 350 |
| HapII | CCGG | 1 cut(s) | 164 |
| Hin1II | CATG | 1 cut(s) | 355 |
| HinfI | GANTC | 2 cut(s) | 74, 121 |
| HpaII | CCGG | 1 cut(s) | 164 |
| HphI | GGTGA | 1 cut(s) | 313 |
| Hpy188I | TCNGA | 3 cut(s) | 67, 235, 258 |
| Hpy188III | TCNNGA | 2 cut(s) | 182, 212 |
| HpyAV | CCTTC | 1 cut(s) | 217 |
| HpyCH4III | ACNGT | 1 cut(s) | 63 |
| HpyCH4V | TGCA | 2 cut(s) | 101, 174 |
| HpyF3I | CTNAG | 5 cut(s) | 30, 72, 108, 232, 255 |
| Hsp92II | CATG | 1 cut(s) | 355 |
| Kzo9I | GATC | 3 cut(s) | 19, 129, 354 |
| LmnI | GCTCC | 1 cut(s) | 112 |
| LpnPI | CCDG | 4 cut(s) | 74, 101, 177, 195 |
| LweI | GCATC | 2 cut(s) | 54, 58 |
| MaeI | CTAG | 2 cut(s) | 42, 155 |
| MalI | GATC | 3 cut(s) | 21, 131, 356 |
| MboI | GATC | 3 cut(s) | 19, 129, 354 |
| MboII | GAAGA | 3 cut(s) | 170, 271, 316 |
| MflI | RGATCY | 1 cut(s) | 129 |
| MluCI | AATT | 1 cut(s) | 312 |
| MlyI | GAGTC | 2 cut(s) | 83, 115 |
| MmeI | TCCRAC | 1 cut(s) | 45 |
| MnlI | CCTC | 5 cut(s) | 110, 178, 241, 256, 292 |
| MseI | TTAA | 1 cut(s) | 146 |
| MspI | CCGG | 1 cut(s) | 164 |
| MspR9I | CCNGG | 1 cut(s) | 89 |
| MvaI | CCWGG | 1 cut(s) | 89 |
| NdeII | GATC | 3 cut(s) | 19, 129, 354 |
| NlaIII | CATG | 1 cut(s) | 355 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 324 |
| PkrI | GCNGC | 1 cut(s) | 276 |
| PleI | GAGTC | 2 cut(s) | 82, 115 |
| PpsI | GAGTC | 2 cut(s) | 82, 115 |
| Psp6I | CCWGG | 1 cut(s) | 87 |
| PspGI | CCWGG | 1 cut(s) | 87 |
| PsuI | RGATCY | 1 cut(s) | 129 |
| SaqAI | TTAA | 1 cut(s) | 146 |
| SatI | GCNGC | 1 cut(s) | 275 |
| Sau3AI | GATC | 3 cut(s) | 19, 129, 354 |
| SchI | GAGTC | 2 cut(s) | 83, 115 |
| ScrFI | CCNGG | 1 cut(s) | 89 |
| SetI | ASST | 6 cut(s) | 99, 154, 160, 211, 228, 303 |
| SfaNI | GCATC | 2 cut(s) | 54, 58 |
| SmlI | CTYRAG | 1 cut(s) | 210 |
| SmoI | CTYRAG | 1 cut(s) | 210 |
| Sse9I | AATT | 1 cut(s) | 312 |
| SsiI | CCGC | 1 cut(s) | 274 |
| SspMI | CTAG | 2 cut(s) | 42, 155 |
| StyD4I | CCNGG | 1 cut(s) | 87 |
| StyI | CCWWGG | 1 cut(s) | 321 |
| TaaI | ACNGT | 1 cut(s) | 63 |
| TasI | AATT | 1 cut(s) | 312 |
| TauI | GCSGC | 1 cut(s) | 277 |
| Tru1I | TTAA | 1 cut(s) | 146 |
| Tru9I | TTAA | 1 cut(s) | 146 |
| TspDTI | ATGAA | 2 cut(s) | 44, 190 |
| XspI | CTAG | 2 cut(s) | 42, 155 |