RLG00000027125

Transferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
8794832 .. 8798466
3635 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027125

Sequence Viewer

Length: 1203 bp
ATGGAGAGGAGGACGAAGATGGCGATGGATATCAGGAGGAGGGTACCACGTGGAGGCTACAACACTAGAAGCACAACTCCTTATTGGATGAGAGACCTTCAGAACAAAAGAGCACAACCAGAAGAAGACTTTGATCTCGGTTTGTCTTTCACCATTCACGGCGGAGATGGAATCGACCCCCCGAGTCGGAGCACCTTCTCGGAGCGGACATACTTCTTGGTGTGGTGGCTCGAACCTGGGAAAGAAAACTGGGCCCCTTTCCCGGCGCCCGGGAAACCTATTGATCCTGCATGGGACAGAATTTGGACTCAGCGATTCGACAGACATGTGTGGCCTGGCTTTATTTATGTGGAAGTTATGAGGAGGCGAGATAAGTGGGCAGCCGGAACTTCCAGTGGCATAGCGACGGTGATTGAGAAAGGGAGGGAGAAAGTGGTGGCGCCGGAAACTCCCGGCGCGGCGGTGTACGGCATAGAGTCAGTGAGCCGGGCCAAGATCCCTCTCCCCAAGCCTGGTAAGAAAAGGTCAGGAAGGTTCGGGCTCGTGAAGAATGATGGGCCTGGGTTGATTGGACAAGGACATATTTCTGTCACTGTGGAACTTCTCATCCGCCCCTCCGGCCGCCCTCACGGTAAGATCCGCGTAAAGCTCGCCTTCCGGGAACGACCTCCCCCGCCAGATTACCATAATACCCCTCCTCCTCCGAGCTATTTCTACTCCAGTGCCCCTATGCCTCCACCGCCTTCCGCTCGCGACTACAGGGCGTACTCGCCGTCGCCGTACAGCTCTTCCGTGCCAGCTTCGGCTCCAACTCCGGCAGCTTCGCCTCCGCCGCCGCCGTACCACTACAGCTCCTATTCAGATCCGTATTCGAGTTACTATCCGGGGTACTACTCCAGCGCGCCGCCGCCGATGCCACCGAGGCCGTTCTTCGATCGGCCAGTGAACTACGGCGGGCCAGGTGGGCCGTCCGGTGGGCCTTCGGCGCCTCTGGAGTACTCACACTATGATCAGAAGCCAAAGAGCGGGAAGATGGGGTTGGGAACCGGATTGGCTGTGGGCGCAGTGGCCGGAGCTCTAGGTGGACTGGCATTGGAAGAAGGAATAAGGTATGAAGAAGATAAGATTGCTGACAGGGTTGAGAATGACTTGGAGCGTGAGCAGCTGCGTGACGATTACAGCAATTATCGGGCCGATTATTGA

Protein Analysis

401

Amino Acids

44.45

Weight (kDa)

9.41

Isoelectric Point (pI)

64.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 43
AccB1I GGYRCC 4 cut(s) 43, 265, 439, 985
AccBSI CCGCTC 3 cut(s) 205, 749, 1026
AccII CGCG 4 cut(s) 458, 642, 753, 902
AclWI GGATC 4 cut(s) 278, 490, 631, 857
AcoI YGGCCR 3 cut(s) 619, 938, 1068
AcsI RAATTY 1 cut(s) 300
AcuI CTGAAG 1 cut(s) 83
AcvI CACGTG 1 cut(s) 50
AcyI GRCGYC 3 cut(s) 266, 440, 986
AfaI GTAC 7 cut(s) 45, 467, 767, 782, 842, 890, 998
AfiI CCNNNNNNNGG 7 cut(s) 53, 186, 262, 269, 512, 974, 1025
AflIII ACRYGT 1 cut(s) 325
AjnI CCWGG 5 cut(s) 235, 334, 511, 559, 958
AjuI GAANNNNNNNTTGG 2 cut(s) 1022, 1054
AloI GAACNNNNNNTCC 2 cut(s) 591, 623
AluBI AGCT 8 cut(s) 649, 708, 786, 800, 821, 852, 1076, 1165
AluI AGCT 8 cut(s) 649, 708, 786, 800, 821, 852, 1076, 1165
Alw21I GWGCWC 3 cut(s) 115, 194, 1078
Alw26I GTCTC 1 cut(s) 87
AlwI GGATC 4 cut(s) 278, 490, 631, 857
Ama87I CYCGRG 2 cut(s) 181, 269
ApaI GGGCCC 1 cut(s) 256
ApeKI GCWGC 4 cut(s) 380, 818, 1162, 1165
ApoI RAATTY 1 cut(s) 300
Asp718I GGTACC 1 cut(s) 43
AspLEI GCGC 7 cut(s) 268, 442, 458, 902, 904, 988, 1064
AspS9I GGNCC 8 cut(s) 252, 253, 489, 557, 956, 965, 977, 1191
AsuC2I CCSGG 7 cut(s) 263, 270, 271, 453, 488, 659, 885
AsuHPI GGTGA 2 cut(s) 142, 421
AvaI CYCGRG 2 cut(s) 181, 269
BaeGI GKGCMC 2 cut(s) 256, 727
BanI GGYRCC 4 cut(s) 43, 265, 439, 985
BanII GRGCYC 3 cut(s) 256, 543, 1078
BauI CACGAG 1 cut(s) 542
BbrPI CACGTG 1 cut(s) 50
BbsI GAAGAC 1 cut(s) 132
Bbv12I GWGCWC 3 cut(s) 115, 194, 1078
BbvI GCAGC 4 cut(s) 392, 830, 1152, 1174
BccI CCATC 5 cut(s) 13, 19, 161, 548, 1027
BceAI ACGGC 8 cut(s) 175, 484, 757, 763, 823, 910, 952, 967
BciT130I CCWGG 5 cut(s) 237, 336, 513, 561, 960
BclI TGATCA 1 cut(s) 1009
BcnI CCSGG 7 cut(s) 263, 270, 271, 453, 488, 659, 885
BcoDI GTCTC 1 cut(s) 87
BfaI CTAG 2 cut(s) 66, 1079
BfmI CTRYAG 2 cut(s) 757, 847
BfoI RGCGCY 3 cut(s) 269, 443, 989
BglI GCCNNNNNGGC 3 cut(s) 618, 922, 964
BmcAI AGTACT 1 cut(s) 998
BmeT110I CYCGRG 2 cut(s) 181, 269
BmgT120I GGNCC 8 cut(s) 252, 253, 489, 557, 956, 965, 977, 1191
BmiI GGNNCC 8 cut(s) 45, 254, 255, 267, 441, 807, 987, 1045
BmrI ACTGGG 1 cut(s) 259
BmsI GCATC 1 cut(s) 903
BmuI ACTGGG 1 cut(s) 259
BpiI GAAGAC 1 cut(s) 132
BpmI CTGGAG 3 cut(s) 703, 880, 1013
BpuMI CCSGG 7 cut(s) 263, 270, 271, 453, 488, 659, 885
BsaAI YACGTR 1 cut(s) 50
BsaBI GATNNNNATC 1 cut(s) 29
BsaHI GRCGYC 3 cut(s) 266, 440, 986
BsaI GGTCTC 1 cut(s) 87
BsaJI CCNNGG 5 cut(s) 236, 269, 560, 884, 920
BsaWI WCCGGW 2 cut(s) 971, 1046
BsaXI ACNNNNNCTCC 4 cut(s) 682, 712, 836, 866
Bsc4I CCNNNNNNNGG 7 cut(s) 53, 186, 262, 269, 512, 974, 1025
Bse1I ACTGG 5 cut(s) 254, 393, 720, 941, 1092
Bse8I GATNNNNATC 1 cut(s) 29
BseBI CCWGG 5 cut(s) 237, 336, 513, 561, 960
BseDI CCNNGG 5 cut(s) 236, 269, 560, 884, 920
BseGI GGATG 2 cut(s) 93, 606
BseJI GATNNNNATC 1 cut(s) 29
BseLI CCNNNNNNNGG 7 cut(s) 53, 186, 262, 269, 512, 974, 1025
BseMII CTCAG 1 cut(s) 323
BseNI ACTGG 5 cut(s) 254, 393, 720, 941, 1092
BsePI GCGCGC 1 cut(s) 900
BseRI GAGGAG 5 cut(s) 22, 52, 376, 687, 690
BseSI GKGCMC 2 cut(s) 256, 727
BseX3I CGGCCG 1 cut(s) 619
BseXI GCAGC 4 cut(s) 392, 830, 1152, 1174
Bsh1236I CGCG 4 cut(s) 458, 642, 753, 902
Bsh1285I CGRYCG 2 cut(s) 622, 937
BshNI GGYRCC 4 cut(s) 43, 265, 439, 985
BsiEI CGRYCG 2 cut(s) 622, 937
BsiHKAI GWGCWC 3 cut(s) 115, 194, 1078
BsiHKCI CYCGRG 2 cut(s) 181, 269
BslFI GGGAC 1 cut(s) 308
BslI CCNNNNNNNGG 7 cut(s) 53, 186, 262, 269, 512, 974, 1025
BsmAI GTCTC 1 cut(s) 87
BsmFI GGGAC 1 cut(s) 308
Bso31I GGTCTC 1 cut(s) 87
BsoBI CYCGRG 2 cut(s) 181, 269
Bsp120I GGGCCC 1 cut(s) 252
Bsp1286I GDGCHC 6 cut(s) 115, 194, 256, 543, 727, 1078
Bsp143I GATC 7 cut(s) 133, 283, 495, 636, 862, 934, 1009
Bsp68I TCGCGA 1 cut(s) 753
BspCNI CTCAG 1 cut(s) 322
BspFNI CGCG 4 cut(s) 458, 642, 753, 902
BspLI GGNNCC 8 cut(s) 45, 254, 255, 267, 441, 807, 987, 1045
BspPI GGATC 4 cut(s) 278, 490, 631, 857
BspQI GCTCTTC 1 cut(s) 793
BspT107I GGYRCC 4 cut(s) 43, 265, 439, 985
BspTNI GGTCTC 1 cut(s) 87
BsrBI CCGCTC 3 cut(s) 205, 749, 1026
BsrI ACTGG 5 cut(s) 254, 393, 720, 941, 1092
BssECI CCNNGG 5 cut(s) 236, 269, 560, 884, 920
BssHII GCGCGC 1 cut(s) 900
BssMI GATC 7 cut(s) 133, 283, 495, 636, 862, 934, 1009
BssNI GRCGYC 3 cut(s) 266, 440, 986
BssSI CACGAG 1 cut(s) 542
Bst2BI CACGAG 1 cut(s) 542
Bst2UI CCWGG 5 cut(s) 237, 336, 513, 561, 960
Bst4CI ACNGT 3 cut(s) 409, 595, 632
Bst6I CTCTTC 1 cut(s) 793
BstACI GRCGYC 3 cut(s) 266, 440, 986
BstBAI YACGTR 1 cut(s) 50
BstC8I GCNNGC 5 cut(s) 651, 751, 798, 902, 956
BstDEI CTNAG 1 cut(s) 309
BstF5I GGATG 2 cut(s) 93, 606
BstFNI CGCG 4 cut(s) 458, 642, 753, 902
BstH2I RGCGCY 3 cut(s) 269, 443, 989
BstHHI GCGC 7 cut(s) 268, 442, 458, 902, 904, 988, 1064
BstKTI GATC 7 cut(s) 136, 286, 498, 639, 865, 937, 1012
BstMAI GTCTC 1 cut(s) 87
BstMBI GATC 7 cut(s) 133, 283, 495, 636, 862, 934, 1009
BstMCI CGRYCG 2 cut(s) 622, 937
BstMWI GCNNNNNNNGC 9 cut(s) 618, 739, 832, 913, 922, 964, 985, 1061, 1162
BstNI CCWGG 5 cut(s) 237, 336, 513, 561, 960
BstNSI RCATGY 1 cut(s) 329
BstSFI CTRYAG 2 cut(s) 757, 847
BstSLI GKGCMC 2 cut(s) 256, 727
BstUI CGCG 4 cut(s) 458, 642, 753, 902
BstV1I GCAGC 4 cut(s) 392, 830, 1152, 1174
BstV2I GAAGAC 1 cut(s) 132
BstX2I RGATCY 3 cut(s) 495, 636, 862
BstYI RGATCY 3 cut(s) 495, 636, 862
BstZI CGGCCG 1 cut(s) 619
BtgZI GCGATG 1 cut(s) 38
BtsCI GGATG 2 cut(s) 93, 606
BtsI GCAGTG 1 cut(s) 1071
BtsIMutI CAGTG 6 cut(s) 400, 486, 591, 727, 948, 1071
BtuMI TCGCGA 1 cut(s) 753
Cac8I GCNNGC 5 cut(s) 651, 751, 798, 902, 956
CfoI GCGC 7 cut(s) 268, 442, 458, 902, 904, 988, 1064
Cfr13I GGNCC 8 cut(s) 252, 253, 489, 557, 956, 965, 977, 1191
Cfr9I CCCGGG 1 cut(s) 269
Csp6I GTAC 7 cut(s) 44, 466, 766, 781, 841, 889, 997
CviAII CATG 2 cut(s) 291, 326
CviQI GTAC 7 cut(s) 44, 466, 766, 781, 841, 889, 997
DdeI CTNAG 1 cut(s) 309
DinI GGCGCC 3 cut(s) 267, 441, 987
DpnI GATC 7 cut(s) 135, 285, 497, 638, 864, 936, 1011
DpnII GATC 7 cut(s) 133, 283, 495, 636, 862, 934, 1009
EaeI YGGCCR 3 cut(s) 619, 938, 1068
EagI CGGCCG 1 cut(s) 619
Eam1104I CTCTTC 1 cut(s) 793
EarI CTCTTC 1 cut(s) 793
EciI GGCGGA 3 cut(s) 177, 599, 819
Ecl136II GAGCTC 1 cut(s) 1076
EclXI CGGCCG 1 cut(s) 619
Eco24I GRGCYC 3 cut(s) 256, 543, 1078
Eco31I GGTCTC 1 cut(s) 87
Eco32I GATATC 1 cut(s) 31
Eco52I CGGCCG 1 cut(s) 619
Eco53kI GAGCTC 1 cut(s) 1076
Eco57I CTGAAG 1 cut(s) 83
Eco72I CACGTG 1 cut(s) 50
Eco88I CYCGRG 2 cut(s) 181, 269
EcoICRI GAGCTC 1 cut(s) 1076
EcoO109I RGGNCCY 1 cut(s) 253
EcoRII CCWGG 5 cut(s) 235, 334, 511, 559, 958
EcoRV GATATC 1 cut(s) 31
EcoT38I GRGCYC 3 cut(s) 256, 543, 1078
EgeI GGCGCC 3 cut(s) 267, 441, 987
EheI GGCGCC 3 cut(s) 267, 441, 987
FaeI CATG 2 cut(s) 294, 329
FalI AAGNNNNNCTT 2 cut(s) 638, 670
FaqI GGGAC 1 cut(s) 308
FatI CATG 2 cut(s) 290, 325
FauI CCCGC 3 cut(s) 681, 947, 1019
FbaI TGATCA 1 cut(s) 1009
FokI GGATG 2 cut(s) 100, 593
FriOI GRGCYC 3 cut(s) 256, 543, 1078
FspBI CTAG 2 cut(s) 66, 1079
GlaI GCGC 7 cut(s) 267, 441, 457, 901, 903, 987, 1063
GsuI CTGGAG 3 cut(s) 703, 880, 1013
HaeII RGCGCY 3 cut(s) 269, 443, 989
HhaI GCGC 7 cut(s) 268, 442, 458, 902, 904, 988, 1064
Hin1I GRCGYC 3 cut(s) 266, 440, 986
Hin1II CATG 2 cut(s) 294, 329
Hin6I GCGC 7 cut(s) 266, 440, 456, 900, 902, 986, 1062
HinP1I GCGC 7 cut(s) 266, 440, 456, 900, 902, 986, 1062
HinfI GANTC 5 cut(s) 171, 184, 307, 315, 476
HphI GGTGA 2 cut(s) 142, 421
Hpy166II GTNNAC 3 cut(s) 466, 946, 1085
Hpy188I TCNGA 6 cut(s) 102, 189, 202, 705, 862, 1014
Hpy188III TCNNGA 5 cut(s) 34, 528, 544, 752, 992
Hpy8I GTNNAC 3 cut(s) 466, 946, 1085
Hpy99I CGWCG 2 cut(s) 409, 778
HpyAV CCTTC 7 cut(s) 107, 205, 525, 664, 753, 990, 1094
HpyCH4III ACNGT 3 cut(s) 409, 595, 632
HpyCH4IV ACGT 1 cut(s) 49
HpyCH4V TGCA 1 cut(s) 290
HpyF10VI GCNNNNNNNGC 9 cut(s) 618, 739, 832, 913, 922, 964, 985, 1061, 1162
HpyF3I CTNAG 1 cut(s) 309
HpySE526I ACGT 1 cut(s) 49
Hsp92I GRCGYC 3 cut(s) 266, 440, 986
Hsp92II CATG 2 cut(s) 294, 329
HspAI GCGC 7 cut(s) 266, 440, 456, 900, 902, 986, 1062
KasI GGCGCC 3 cut(s) 265, 439, 985
KpnI GGTACC 1 cut(s) 47
Ksp22I TGATCA 1 cut(s) 1009
Kzo9I GATC 7 cut(s) 133, 283, 495, 636, 862, 934, 1009
LguI GCTCTTC 1 cut(s) 793
LmnI GCTCC 6 cut(s) 189, 202, 811, 857, 1073, 1153
Lsp1109I GCAGC 4 cut(s) 392, 830, 1152, 1174
LweI GCATC 1 cut(s) 903
MaeI CTAG 2 cut(s) 66, 1079
MaeII ACGT 1 cut(s) 49
MaeIII GTNAC 3 cut(s) 589, 875, 1169
MalI GATC 7 cut(s) 135, 285, 497, 638, 864, 936, 1011
MbiI CCGCTC 3 cut(s) 205, 749, 1026
MboI GATC 7 cut(s) 133, 283, 495, 636, 862, 934, 1009
MflI RGATCY 3 cut(s) 495, 636, 862
MhlI GDGCHC 6 cut(s) 115, 194, 256, 543, 727, 1078
MluCI AATT 2 cut(s) 300, 1183
Mly113I GGCGCC 3 cut(s) 266, 440, 986
MlyI GAGTC 3 cut(s) 193, 301, 485
MmeI TCCRAC 2 cut(s) 167, 833
MspA1I CMGCKG 1 cut(s) 1165
MvaI CCWGG 5 cut(s) 237, 336, 513, 561, 960
MvnI CGCG 4 cut(s) 458, 642, 753, 902
MwoI GCNNNNNNNGC 9 cut(s) 618, 739, 832, 913, 922, 964, 985, 1061, 1162
NarI GGCGCC 3 cut(s) 266, 440, 986
NciI CCSGG 7 cut(s) 263, 270, 271, 453, 488, 659, 885
NdeII GATC 7 cut(s) 133, 283, 495, 636, 862, 934, 1009
NlaIII CATG 2 cut(s) 294, 329
NlaIV GGNNCC 8 cut(s) 45, 254, 255, 267, 441, 807, 987, 1045
NmuCI GTSAC 2 cut(s) 589, 1169
NruI TCGCGA 1 cut(s) 753
NspI RCATGY 1 cut(s) 329
PauI GCGCGC 1 cut(s) 900
PciI ACATGT 1 cut(s) 325
PciSI GCTCTTC 1 cut(s) 793
PcsI WCGNNNNNNNCGW 2 cut(s) 20, 776
PfeI GAWTC 2 cut(s) 171, 315
PfoI TCCNGGA 1 cut(s) 657
Ple19I CGATCG 1 cut(s) 937
PleI GAGTC 3 cut(s) 192, 301, 484
PluTI GGCGCC 3 cut(s) 269, 443, 989
PmaCI CACGTG 1 cut(s) 50
PmlI CACGTG 1 cut(s) 50
PpsI GAGTC 3 cut(s) 192, 301, 484
Ppu21I YACGTR 1 cut(s) 50
PscI ACATGT 1 cut(s) 325
Psp124BI GAGCTC 1 cut(s) 1078
Psp6I CCWGG 5 cut(s) 235, 334, 511, 559, 958
PspCI CACGTG 1 cut(s) 50
PspGI CCWGG 5 cut(s) 235, 334, 511, 559, 958
PspN4I GGNNCC 8 cut(s) 45, 254, 255, 267, 441, 807, 987, 1045
PspOMI GGGCCC 1 cut(s) 252
PspPI GGNCC 8 cut(s) 252, 253, 489, 557, 956, 965, 977, 1191
PsuI RGATCY 3 cut(s) 495, 636, 862
PteI GCGCGC 1 cut(s) 900
PvuI CGATCG 1 cut(s) 937
PvuII CAGCTG 1 cut(s) 1165
RruI TCGCGA 1 cut(s) 753
RsaI GTAC 7 cut(s) 45, 467, 767, 782, 842, 890, 998
RsaNI GTAC 7 cut(s) 44, 466, 766, 781, 841, 889, 997
SacI GAGCTC 1 cut(s) 1078
SapI GCTCTTC 1 cut(s) 793
Sau3AI GATC 7 cut(s) 133, 283, 495, 636, 862, 934, 1009
Sau96I GGNCC 8 cut(s) 252, 253, 489, 557, 956, 965, 977, 1191
ScaI AGTACT 1 cut(s) 998
SchI GAGTC 3 cut(s) 193, 301, 485
SduI GDGCHC 6 cut(s) 115, 194, 256, 543, 727, 1078
SfaNI GCATC 1 cut(s) 903
SfcI CTRYAG 2 cut(s) 757, 847
SfiI GGCCNNNNNGGCC 1 cut(s) 964
SfoI GGCGCC 3 cut(s) 267, 441, 987
SmaI CCCGGG 1 cut(s) 271
Sse9I AATT 2 cut(s) 300, 1183
SspDI GGCGCC 3 cut(s) 265, 439, 985
SspMI CTAG 2 cut(s) 66, 1079
SstI GAGCTC 1 cut(s) 1078
TaaI ACNGT 3 cut(s) 409, 595, 632
TaiI ACGT 1 cut(s) 52
TaqI TCGA 5 cut(s) 174, 231, 318, 872, 933
TasI AATT 2 cut(s) 300, 1183
TatI WGTACW 1 cut(s) 996
TauI GCSGC 6 cut(s) 461, 624, 835, 838, 907, 910
TfiI GAWTC 2 cut(s) 171, 315
TscAI CASTG 6 cut(s) 400, 486, 598, 727, 948, 1071
TseFI GTSAC 2 cut(s) 589, 1169
TseI GCWGC 4 cut(s) 380, 818, 1162, 1165
Tsp45I GTSAC 2 cut(s) 589, 1169
TspDTI ATGAA 1 cut(s) 1128
TspGWI ACGGA 2 cut(s) 781, 855
TspMI CCCGGG 1 cut(s) 269
TspRI CASTG 6 cut(s) 400, 486, 598, 727, 948, 1071
XapI RAATTY 1 cut(s) 300
XceI RCATGY 1 cut(s) 329
XmaI CCCGGG 1 cut(s) 269
XspI CTAG 2 cut(s) 66, 1079
ZrmI AGTACT 1 cut(s) 998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.