Rmu_ssc0000189.1_g000035

Transferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000189.1
Physical Location & Seq
Forward (+)
232784 .. 233535
752 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000189.1_g000035.1.cds

Sequence Viewer

Length: 495 bp
atgagaaacttaatcgaatccagcaacttaacaagagattcaagaaattcaaacccagaaatcgagcttgaagaatcaccgagcttgaacccagaaatcgaacccaaaatttctccaagcttgagtcaccgagcttcacagaatcacagcttaaggaagaatcaaagagagcaaaccaagagtgaagagttcgagccttcgactgaaaaatccgcctcttcttgccctccgccgccgaagcctcccaatctcgacctcacgattgtctccgccaagcacctgaagaacaccaactggaagaacgatgacctcaagccctacgtcatcttctgggtcgaccccgacctcttcctagccaccaaatctgacgattccggctccacccgacccatctggaatggggcttcactttccccctctccttctccctccacgactccttcctcaccctcgaaatcttccactccaaaccctccgacactcctaaacccttag

Protein Analysis

164

Amino Acids

18.09

Weight (kDa)

5.93

Isoelectric Point (pI)

73.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 336
AciI CCGC 4 cut(s) 213, 230, 233, 270
AcsI RAATTY 2 cut(s) 46, 108
AcuI CTGAAG 1 cut(s) 302
AflII CTTAAG 1 cut(s) 151
AgsI TTSAA 4 cut(s) 42, 51, 71, 88
AluBI AGCT 5 cut(s) 67, 84, 120, 134, 150
AluI AGCT 5 cut(s) 67, 84, 120, 134, 150
Alw26I GTCTC 1 cut(s) 271
ApoI RAATTY 2 cut(s) 46, 108
AsuHPI GGTGA 3 cut(s) 69, 119, 438
BccI CCATC 1 cut(s) 398
BcoDI GTCTC 1 cut(s) 271
BfaI CTAG 1 cut(s) 353
BfrI CTTAAG 1 cut(s) 151
BisI GCNGC 1 cut(s) 233
BlsI GCNGC 1 cut(s) 234
BmiI GGNNCC 1 cut(s) 379
BpuEI CTTGAG 2 cut(s) 142, 296
Bse1I ACTGG 1 cut(s) 299
BseNI ACTGG 1 cut(s) 299
BsiSI CCGG 1 cut(s) 375
BsmAI GTCTC 1 cut(s) 271
BspACI CCGC 4 cut(s) 213, 230, 233, 270
BspLI GGNNCC 1 cut(s) 379
BspTI CTTAAG 1 cut(s) 151
BsrI ACTGG 1 cut(s) 299
Bst6I CTCTTC 3 cut(s) 180, 223, 353
BstAFI CTTAAG 1 cut(s) 151
BstDEI CTNAG 1 cut(s) 492
BstMAI GTCTC 1 cut(s) 271
BstMWI GCNNNNNNNGC 1 cut(s) 238
DdeI CTNAG 1 cut(s) 492
Eam1104I CTCTTC 3 cut(s) 180, 223, 353
EarI CTCTTC 3 cut(s) 180, 223, 353
EciI GGCGGA 3 cut(s) 202, 219, 259
Eco57I CTGAAG 1 cut(s) 302
FblI GTMKAC 1 cut(s) 336
Fnu4HI GCNGC 1 cut(s) 233
Fsp4HI GCNGC 1 cut(s) 233
FspBI CTAG 1 cut(s) 353
GluI GCNGC 1 cut(s) 233
HapII CCGG 1 cut(s) 375
HincII GTYRAC 1 cut(s) 337
HindII GTYRAC 1 cut(s) 337
HindIII AAGCTT 1 cut(s) 118
HinfI GANTC 8 cut(s) 17, 38, 74, 124, 142, 160, 371, 436
HpaII CCGG 1 cut(s) 375
HphI GGTGA 3 cut(s) 69, 119, 438
Hpy166II GTNNAC 1 cut(s) 337
Hpy188I TCNGA 2 cut(s) 367, 477
Hpy188III TCNNGA 4 cut(s) 42, 251, 259, 394
Hpy8I GTNNAC 1 cut(s) 337
HpyAV CCTTC 3 cut(s) 207, 432, 450
HpyCH4IV ACGT 1 cut(s) 321
HpyF10VI GCNNNNNNNGC 1 cut(s) 238
HpyF3I CTNAG 1 cut(s) 492
HpySE526I ACGT 1 cut(s) 321
LmnI GCTCC 1 cut(s) 383
LpnPI CCDG 8 cut(s) 34, 69, 105, 280, 293, 316, 379, 388
MaeI CTAG 1 cut(s) 353
MaeII ACGT 1 cut(s) 321
MaeIII GTNAC 1 cut(s) 125
MboII GAAGA 9 cut(s) 83, 169, 197, 210, 295, 310, 319, 340, 450
MluCI AATT 2 cut(s) 46, 108
MlyI GAGTC 2 cut(s) 133, 430
MseI TTAA 3 cut(s) 11, 29, 152
MspCI CTTAAG 1 cut(s) 151
MspI CCGG 1 cut(s) 375
MwoI GCNNNNNNNGC 1 cut(s) 238
NlaIV GGNNCC 1 cut(s) 379
NmuCI GTSAC 1 cut(s) 125
PfeI GAWTC 6 cut(s) 17, 38, 74, 142, 160, 371
PkrI GCNGC 1 cut(s) 234
PleI GAGTC 2 cut(s) 132, 430
PpsI GAGTC 2 cut(s) 132, 430
PspN4I GGNNCC 1 cut(s) 379
SalI GTCGAC 1 cut(s) 335
SaqAI TTAA 3 cut(s) 11, 29, 152
SatI GCNGC 1 cut(s) 233
SchI GAGTC 2 cut(s) 133, 430
SmlI CTYRAG 3 cut(s) 121, 151, 311
SmoI CTYRAG 3 cut(s) 121, 151, 311
Sse9I AATT 2 cut(s) 46, 108
SsiI CCGC 4 cut(s) 213, 230, 233, 270
SspMI CTAG 1 cut(s) 353
TaiI ACGT 1 cut(s) 324
TaqI TCGA 8 cut(s) 15, 63, 99, 192, 200, 252, 336, 452
TasI AATT 2 cut(s) 46, 108
TauI GCSGC 1 cut(s) 235
TfiI GAWTC 6 cut(s) 17, 38, 74, 142, 160, 371
Tru1I TTAA 3 cut(s) 11, 29, 152
Tru9I TTAA 3 cut(s) 11, 29, 152
TseFI GTSAC 1 cut(s) 125
Tsp45I GTSAC 1 cut(s) 125
Vha464I CTTAAG 1 cut(s) 151
XapI RAATTY 2 cut(s) 46, 108
XmiI GTMKAC 1 cut(s) 336
XspI CTAG 1 cut(s) 353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.