Rmu_sc0003605.1_g000040

Transferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003605.1
Physical Location & Seq
Forward (+)
165692 .. 166027
336 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003605.1_g000040.1.cds

Sequence Viewer

Length: 336 bp
atggcctcctctcgccctctgccgccgaagcctcccgatctcgacttcacgatcgtctccaccaagcacctgaagaacttcaactggaataacgacgacctcaagccctacgctgtcttctgggttgaccctgacctccgcctcgccaccaaatcagacgactccagctccacccgacctgtctggaatgagcgattcactctccccctctccttctccctccacgactctttcctcaccctcaaaatcttccactccaaaccgtctgacactcccaaacccttagtcggctctctccacccccccccccttcaaagacctacgcgacctggataa

Protein Analysis

111

Amino Acids

12.62

Weight (kDa)

9.45

Isoelectric Point (pI)

35.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 325
AciI CCGC 2 cut(s) 23, 139
AcuI CTGAAG 1 cut(s) 92
AfiI CCNNNNNNNGG 1 cut(s) 287
AgsI TTSAA 2 cut(s) 82, 314
AjnI CCWGG 1 cut(s) 328
AluBI AGCT 1 cut(s) 168
AluI AGCT 1 cut(s) 168
Alw26I GTCTC 1 cut(s) 61
AoxI GGCC 1 cut(s) 3
ArsI GACNNNNNNTTYG 2 cut(s) 270, 302
Asp700I GAANNNNTTC 1 cut(s) 77
AsuHPI GGTGA 1 cut(s) 229
BbsI GAAGAC 1 cut(s) 109
BciT130I CCWGG 1 cut(s) 330
BcoDI GTCTC 1 cut(s) 61
BisI GCNGC 1 cut(s) 23
BlsI GCNGC 1 cut(s) 24
Bme1390I CCNGG 1 cut(s) 330
BmrFI CCNGG 1 cut(s) 330
BpiI GAAGAC 1 cut(s) 109
BpmI CTGGAG 1 cut(s) 148
BpuEI CTTGAG 1 cut(s) 86
BsaXI ACNNNNNCTCC 2 cut(s) 152, 182
Bsc4I CCNNNNNNNGG 1 cut(s) 287
Bse1I ACTGG 1 cut(s) 89
BseBI CCWGG 1 cut(s) 330
BseLI CCNNNNNNNGG 1 cut(s) 287
BseNI ACTGG 1 cut(s) 89
Bsh1236I CGCG 1 cut(s) 325
Bsh1285I CGRYCG 1 cut(s) 54
BshFI GGCC 1 cut(s) 5
BsiEI CGRYCG 1 cut(s) 54
BslI CCNNNNNNNGG 1 cut(s) 287
BsmAI GTCTC 1 cut(s) 61
BsmBI CGTCTC 1 cut(s) 61
BsnI GGCC 1 cut(s) 5
Bsp143I GATC 2 cut(s) 37, 51
BspACI CCGC 2 cut(s) 23, 139
BspANI GGCC 1 cut(s) 5
BspFNI CGCG 1 cut(s) 325
BsrI ACTGG 1 cut(s) 89
BssMI GATC 2 cut(s) 37, 51
Bst2UI CCWGG 1 cut(s) 330
Bst4CI ACNGT 1 cut(s) 264
BstDEI CTNAG 1 cut(s) 283
BstFNI CGCG 1 cut(s) 325
BstKTI GATC 2 cut(s) 40, 54
BstMAI GTCTC 1 cut(s) 61
BstMBI GATC 2 cut(s) 37, 51
BstMCI CGRYCG 1 cut(s) 54
BstMWI GCNNNNNNNGC 1 cut(s) 28
BstNI CCWGG 1 cut(s) 330
BstSCI CCNGG 1 cut(s) 328
BstUI CGCG 1 cut(s) 325
BstV2I GAAGAC 1 cut(s) 109
BsuRI GGCC 1 cut(s) 5
CviJI RGCY 5 cut(s) 5, 31, 106, 168, 291
CviKI_1 RGCY 5 cut(s) 5, 31, 106, 168, 291
DdeI CTNAG 1 cut(s) 283
DpnI GATC 2 cut(s) 39, 53
DpnII GATC 2 cut(s) 37, 51
EciI GGCGGA 1 cut(s) 128
Eco57I CTGAAG 1 cut(s) 92
EcoRII CCWGG 1 cut(s) 328
Esp3I CGTCTC 1 cut(s) 61
Fnu4HI GCNGC 1 cut(s) 23
Fsp4HI GCNGC 1 cut(s) 23
GluI GCNGC 1 cut(s) 23
GsuI CTGGAG 1 cut(s) 148
HaeIII GGCC 1 cut(s) 5
HincII GTYRAC 1 cut(s) 127
HindII GTYRAC 1 cut(s) 127
HinfI GANTC 3 cut(s) 161, 195, 227
HphI GGTGA 1 cut(s) 229
Hpy166II GTNNAC 1 cut(s) 127
Hpy188I TCNGA 2 cut(s) 157, 268
Hpy188III TCNNGA 4 cut(s) 35, 41, 49, 184
Hpy8I GTNNAC 1 cut(s) 127
Hpy99I CGWCG 1 cut(s) 98
HpyAV CCTTC 2 cut(s) 223, 320
HpyCH4III ACNGT 1 cut(s) 264
HpyF10VI GCNNNNNNNGC 1 cut(s) 28
HpyF3I CTNAG 1 cut(s) 283
Kzo9I GATC 2 cut(s) 37, 51
LmnI GCTCC 1 cut(s) 173
LpnPI CCDG 8 cut(s) 70, 83, 106, 144, 169, 178, 192, 315
MalI GATC 2 cut(s) 39, 53
MboI GATC 2 cut(s) 37, 51
MboII GAAGA 3 cut(s) 85, 109, 241
MlyI GAGTC 2 cut(s) 155, 221
MroXI GAANNNNTTC 1 cut(s) 77
MspR9I CCNGG 1 cut(s) 330
MvaI CCWGG 1 cut(s) 330
MvnI CGCG 1 cut(s) 325
MwoI GCNNNNNNNGC 1 cut(s) 28
NdeII GATC 2 cut(s) 37, 51
PdmI GAANNNNTTC 1 cut(s) 77
PfeI GAWTC 1 cut(s) 195
PkrI GCNGC 1 cut(s) 24
Ple19I CGATCG 1 cut(s) 54
PleI GAGTC 2 cut(s) 155, 221
PpsI GAGTC 2 cut(s) 155, 221
Psp6I CCWGG 1 cut(s) 328
PspGI CCWGG 1 cut(s) 328
PvuI CGATCG 1 cut(s) 54
SatI GCNGC 1 cut(s) 23
Sau3AI GATC 2 cut(s) 37, 51
SchI GAGTC 2 cut(s) 155, 221
ScrFI CCNGG 1 cut(s) 330
SetI ASST 7 cut(s) 72, 102, 138, 170, 181, 322, 331
SmlI CTYRAG 1 cut(s) 101
SmoI CTYRAG 1 cut(s) 101
SsiI CCGC 2 cut(s) 23, 139
StyD4I CCNGG 1 cut(s) 328
TaaI ACNGT 1 cut(s) 264
TaqI TCGA 1 cut(s) 42
TauI GCSGC 1 cut(s) 25
TfiI GAWTC 1 cut(s) 195
XmnI GAANNNNTTC 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.