Rmu_sc0001772.1_g000068

Transferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001772.1
Physical Location & Seq
Reverse (-)
313723 .. 314103
381 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001772.1_g000068.1.cds

Sequence Viewer

Length: 381 bp
ctgaagtactccctccctctcgacctcacgatcgtctccgccaagcacctgaagaacgtcaactggaagaacgacgacctcaagccctacgccgtcttctgggtcaaccccgacctcctcctcaccaccaaatccgacgactcttgctccacccgacccgtttggaatgagcgcttcactttccccctctccttctccctccacgattccttcctcaccctcgaaatcttccactccaaaccctccgacactcccaaacccttagtcggctctctccacctccccctcaaagacctacgcaacccagataaacagaggaggaaagagacggaagaagaagagctaaaaagaaaaacagaagagagagaagaaaataaataa

Protein Analysis

126

Amino Acids

14.83

Weight (kDa)

7.1

Isoelectric Point (pI)

47.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 39
AcuI CTGAAG 2 cut(s) 23, 71
AfaI GTAC 1 cut(s) 8
AfeI AGCGCT 1 cut(s) 173
AfiI CCNNNNNNNGG 2 cut(s) 99, 266
AluBI AGCT 1 cut(s) 343
AluI AGCT 1 cut(s) 343
Alw26I GTCTC 2 cut(s) 40, 320
Aor51HI AGCGCT 1 cut(s) 173
ArsI GACNNNNNNTTYG 2 cut(s) 249, 281
AspLEI GCGC 1 cut(s) 174
AsuHPI GGTGA 2 cut(s) 115, 208
BbsI GAAGAC 1 cut(s) 88
BceAI ACGGC 1 cut(s) 77
BcoDI GTCTC 2 cut(s) 40, 320
BfoI RGCGCY 1 cut(s) 175
BmcAI AGTACT 1 cut(s) 8
BpiI GAAGAC 1 cut(s) 88
BpuEI CTTGAG 1 cut(s) 65
BsaXI ACNNNNNCTCC 2 cut(s) 131, 161
Bsc4I CCNNNNNNNGG 2 cut(s) 99, 266
Bse1I ACTGG 1 cut(s) 68
BseLI CCNNNNNNNGG 2 cut(s) 99, 266
BseNI ACTGG 1 cut(s) 68
BseRI GAGGAG 3 cut(s) 107, 110, 331
Bsh1285I CGRYCG 1 cut(s) 33
BsiEI CGRYCG 1 cut(s) 33
BslI CCNNNNNNNGG 2 cut(s) 99, 266
BsmAI GTCTC 2 cut(s) 40, 320
BsmBI CGTCTC 2 cut(s) 40, 320
Bsp143I GATC 1 cut(s) 30
BspACI CCGC 1 cut(s) 39
BspQI GCTCTTC 1 cut(s) 333
BsrI ACTGG 1 cut(s) 68
BssMI GATC 1 cut(s) 30
Bst6I CTCTTC 2 cut(s) 333, 354
BstDEI CTNAG 1 cut(s) 262
BstH2I RGCGCY 1 cut(s) 175
BstHHI GCGC 1 cut(s) 174
BstKTI GATC 1 cut(s) 33
BstMAI GTCTC 2 cut(s) 40, 320
BstMBI GATC 1 cut(s) 30
BstMCI CGRYCG 1 cut(s) 33
BstV2I GAAGAC 1 cut(s) 88
CfoI GCGC 1 cut(s) 174
Csp6I GTAC 1 cut(s) 7
CviJI RGCY 3 cut(s) 85, 270, 343
CviKI_1 RGCY 3 cut(s) 85, 270, 343
CviQI GTAC 1 cut(s) 7
DdeI CTNAG 1 cut(s) 262
DpnI GATC 1 cut(s) 32
DpnII GATC 1 cut(s) 30
Eam1104I CTCTTC 2 cut(s) 333, 354
EarI CTCTTC 2 cut(s) 333, 354
EciI GGCGGA 1 cut(s) 28
Eco47III AGCGCT 1 cut(s) 173
Eco57I CTGAAG 2 cut(s) 23, 71
Esp3I CGTCTC 2 cut(s) 40, 320
GlaI GCGC 1 cut(s) 173
HaeII RGCGCY 1 cut(s) 175
HhaI GCGC 1 cut(s) 174
Hin6I GCGC 1 cut(s) 172
HinP1I GCGC 1 cut(s) 172
HincII GTYRAC 2 cut(s) 61, 106
HindII GTYRAC 2 cut(s) 61, 106
HinfI GANTC 2 cut(s) 140, 206
HphI GGTGA 2 cut(s) 115, 208
Hpy166II GTNNAC 2 cut(s) 61, 106
Hpy188I TCNGA 2 cut(s) 136, 247
Hpy188III TCNNGA 2 cut(s) 20, 28
Hpy8I GTNNAC 2 cut(s) 61, 106
Hpy99I CGWCG 2 cut(s) 77, 140
HpyAV CCTTC 2 cut(s) 202, 220
HpyCH4IV ACGT 1 cut(s) 57
HpyF3I CTNAG 1 cut(s) 262
HpySE526I ACGT 1 cut(s) 57
HspAI GCGC 1 cut(s) 172
Kzo9I GATC 1 cut(s) 30
LguI GCTCTTC 1 cut(s) 333
LmnI GCTCC 1 cut(s) 152
LpnPI CCDG 4 cut(s) 49, 62, 85, 318
MaeII ACGT 1 cut(s) 57
MalI GATC 1 cut(s) 32
MboI GATC 1 cut(s) 30
MboII GAAGA 9 cut(s) 64, 79, 88, 220, 344, 347, 350, 371, 380
MlyI GAGTC 1 cut(s) 134
MmeI TCCRAC 2 cut(s) 159, 270
NdeII GATC 1 cut(s) 30
PciSI GCTCTTC 1 cut(s) 333
PfeI GAWTC 1 cut(s) 206
Ple19I CGATCG 1 cut(s) 33
PleI GAGTC 1 cut(s) 134
PpsI GAGTC 1 cut(s) 134
PvuI CGATCG 1 cut(s) 33
RsaI GTAC 1 cut(s) 8
RsaNI GTAC 1 cut(s) 7
SapI GCTCTTC 1 cut(s) 333
Sau3AI GATC 1 cut(s) 30
ScaI AGTACT 1 cut(s) 8
SchI GAGTC 1 cut(s) 134
SetI ASST 8 cut(s) 27, 51, 60, 81, 117, 282, 297, 345
SmlI CTYRAG 1 cut(s) 80
SmoI CTYRAG 1 cut(s) 80
SsiI CCGC 1 cut(s) 39
TaiI ACGT 1 cut(s) 60
TaqI TCGA 2 cut(s) 21, 222
TatI WGTACW 1 cut(s) 6
TfiI GAWTC 1 cut(s) 206
TspGWI ACGGA 1 cut(s) 344
ZrmI AGTACT 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.