Rmu_sc0001792.1_g000008

Transferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001792.1
Physical Location & Seq
Forward (+)
20194 .. 20943
750 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001792.1_g000008.1.cds

Sequence Viewer

Length: 495 bp
atgagaaacttaatcgaatccaacaacttaacaagagattcaagaaattcgaaccccgaaatcgagcttgaagaatcaccgagcttgaacccagaaatcgaacccaaaatttctccaagcttgagtcaccgagcttcacagaatcacagcttgaggaagaatcaaagagagcaaaccaagagtgaagagttcgagccttcgactgaaaagtccgcctcctcttgccctcctcccccgaagcctcccaatctggacctcacgatcgtctccgccaagcaccagaagaacgccaactggaagaacgatgacctcaagccctacgccatcttctgggtataccccgacctcctcctcgccaccaaatccgatgattccggctccactcgacccatctggaatggggcttcactttccccctctccttctccctccacgactccttcctcacccttgaaatcttccactccaaaccctccgacactcccaaacccttag

Protein Analysis

164

Amino Acids

18.1

Weight (kDa)

6.3

Isoelectric Point (pI)

76.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 208
AccB7I CCANNNNNTGG 1 cut(s) 330
AccI GTMKAC 1 cut(s) 336
AciI CCGC 2 cut(s) 213, 270
AcsI RAATTY 2 cut(s) 46, 108
AfiI CCNNNNNNNGG 1 cut(s) 330
AgsI TTSAA 4 cut(s) 42, 71, 88, 454
AluBI AGCT 5 cut(s) 67, 84, 120, 134, 150
AluI AGCT 5 cut(s) 67, 84, 120, 134, 150
Alw26I GTCTC 1 cut(s) 271
ApoI RAATTY 2 cut(s) 46, 108
AspS9I GGNCC 1 cut(s) 253
AsuHPI GGTGA 3 cut(s) 69, 119, 438
AsuII TTCGAA 1 cut(s) 50
AvaII GGWCC 1 cut(s) 253
BccI CCATC 2 cut(s) 332, 398
BcoDI GTCTC 1 cut(s) 271
Bme18I GGWCC 1 cut(s) 253
BmgT120I GGNCC 1 cut(s) 253
BmiI GGNNCC 1 cut(s) 379
Bpu14I TTCGAA 1 cut(s) 50
BpuEI CTTGAG 3 cut(s) 142, 172, 296
Bsc4I CCNNNNNNNGG 1 cut(s) 330
Bse1I ACTGG 1 cut(s) 299
BseLI CCNNNNNNNGG 1 cut(s) 330
BseNI ACTGG 1 cut(s) 299
BseRI GAGGAG 4 cut(s) 208, 219, 338, 341
Bsh1285I CGRYCG 1 cut(s) 264
BsiEI CGRYCG 1 cut(s) 264
BsiSI CCGG 1 cut(s) 375
BslI CCNNNNNNNGG 1 cut(s) 330
BsmAI GTCTC 1 cut(s) 271
BsmBI CGTCTC 1 cut(s) 271
Bsp119I TTCGAA 1 cut(s) 50
Bsp143I GATC 1 cut(s) 261
BspACI CCGC 2 cut(s) 213, 270
BspLI GGNNCC 1 cut(s) 379
BspT104I TTCGAA 1 cut(s) 50
BsrI ACTGG 1 cut(s) 299
BssMI GATC 1 cut(s) 261
BssNAI GTATAC 1 cut(s) 337
Bst1107I GTATAC 1 cut(s) 337
Bst6I CTCTTC 1 cut(s) 180
BstBI TTCGAA 1 cut(s) 50
BstDEI CTNAG 1 cut(s) 492
BstKTI GATC 1 cut(s) 264
BstMAI GTCTC 1 cut(s) 271
BstMBI GATC 1 cut(s) 261
BstMCI CGRYCG 1 cut(s) 264
BstZ17I GTATAC 1 cut(s) 337
Cfr13I GGNCC 1 cut(s) 253
DdeI CTNAG 1 cut(s) 492
DpnI GATC 1 cut(s) 263
DpnII GATC 1 cut(s) 261
DrdI GACNNNNNNGTC 1 cut(s) 208
DseDI GACNNNNNNGTC 1 cut(s) 208
Eam1104I CTCTTC 1 cut(s) 180
EarI CTCTTC 1 cut(s) 180
EciI GGCGGA 2 cut(s) 202, 259
Eco47I GGWCC 1 cut(s) 253
Esp3I CGTCTC 1 cut(s) 271
FaiI YATR 1 cut(s) 337
FblI GTMKAC 1 cut(s) 336
HapII CCGG 1 cut(s) 375
HindIII AAGCTT 1 cut(s) 118
HinfI GANTC 8 cut(s) 17, 38, 74, 124, 142, 160, 371, 436
HpaII CCGG 1 cut(s) 375
HphI GGTGA 3 cut(s) 69, 119, 438
Hpy166II GTNNAC 1 cut(s) 337
Hpy188I TCNGA 2 cut(s) 367, 477
Hpy188III TCNNGA 4 cut(s) 42, 251, 259, 394
Hpy8I GTNNAC 1 cut(s) 337
HpyAV CCTTC 3 cut(s) 207, 432, 450
HpyF3I CTNAG 1 cut(s) 492
Kzo9I GATC 1 cut(s) 261
LmnI GCTCC 1 cut(s) 383
LpnPI CCDG 7 cut(s) 105, 236, 280, 293, 316, 379, 388
MaeIII GTNAC 1 cut(s) 125
MalI GATC 1 cut(s) 263
MboI GATC 1 cut(s) 261
MboII GAAGA 7 cut(s) 83, 169, 197, 295, 310, 319, 450
MluCI AATT 2 cut(s) 46, 108
MlyI GAGTC 2 cut(s) 133, 430
MmeI TCCRAC 1 cut(s) 45
MseI TTAA 2 cut(s) 11, 29
MspI CCGG 1 cut(s) 375
NdeII GATC 1 cut(s) 261
NlaIV GGNNCC 1 cut(s) 379
NmuCI GTSAC 1 cut(s) 125
NspV TTCGAA 1 cut(s) 50
PfeI GAWTC 6 cut(s) 17, 38, 74, 142, 160, 371
PflMI CCANNNNNTGG 1 cut(s) 330
Ple19I CGATCG 1 cut(s) 264
PleI GAGTC 2 cut(s) 132, 430
PpsI GAGTC 2 cut(s) 132, 430
PspN4I GGNNCC 1 cut(s) 379
PspPI GGNCC 1 cut(s) 253
PvuI CGATCG 1 cut(s) 264
SaqAI TTAA 2 cut(s) 11, 29
Sau3AI GATC 1 cut(s) 261
Sau96I GGNCC 1 cut(s) 253
SchI GAGTC 2 cut(s) 133, 430
SetI ASST 8 cut(s) 69, 86, 122, 136, 152, 258, 312, 348
SfuI TTCGAA 1 cut(s) 50
SinI GGWCC 1 cut(s) 253
SmlI CTYRAG 3 cut(s) 121, 151, 311
SmoI CTYRAG 3 cut(s) 121, 151, 311
Sse9I AATT 2 cut(s) 46, 108
SsiI CCGC 2 cut(s) 213, 270
TaqI TCGA 7 cut(s) 15, 50, 63, 99, 192, 200, 385
TasI AATT 2 cut(s) 46, 108
TfiI GAWTC 6 cut(s) 17, 38, 74, 142, 160, 371
Tru1I TTAA 2 cut(s) 11, 29
Tru9I TTAA 2 cut(s) 11, 29
TseFI GTSAC 1 cut(s) 125
Tsp45I GTSAC 1 cut(s) 125
Van91I CCANNNNNTGG 1 cut(s) 330
VpaK11BI GGWCC 1 cut(s) 253
XapI RAATTY 2 cut(s) 46, 108
XmiI GTMKAC 1 cut(s) 336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.