Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000083.1

Orthogroup ID

OG0001407

Physical Location & Seq

Genomic Coordinates Forward (+)

112744 .. 114873

Gene Structure 2130 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000083.1_g000025.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

atggagcctcgtggtagaggtgtgtatgatgtttctcatattgataaagatgatggagttatgaattccaaacttgagaggctcgaaggaaagattgacaagaaatttgagatgcttcttcaagcgcaaaagggtagtggttcgtcgtcttcacatgtcaagagtgttgtttcttcacatctttgcttgatttgtgagtctcctcatcattctactcatgattgtcacttggcttcacaatttccggaatttgttgaggagcaagctagagctattaattcttatcaaaggccaccaagaaatgatccttattctactacatataatccgggttggcgtaaccacccaaatttctcatggaaggatggtggagggtcttctaatgcacaccaaggtggttctcattcatatggagggaatcaaggccttaattcttcatcttttggtcttcacggtcatggaaacatacaatttggtggacaaaatcattatgggcagcaagcatctacttacaattctcaaggccaagggccatcttttagtgctacacatgcttatggaggagccccacatgatactcaagggtttggtcaaagctcccattcatttggaggtgccaatcctacacaaaatgctccttccggatttcaaaataggcaagcaccacaactggaaccaaagaagtctcatatggatgatatattggccgccctatcccaaagtcatacttctcttacacaaagccaagcgaagactgatcaaactcttaatattcttgctcaaggtcaaagttcgcttgcacaatgtgtgggaaaattagaggtccaaatgggacatttagctaacgtgcttagagcacgtccacatggtgcattacctacacaaccggatcaaaatctgagacatgtgcaagctaaggctattactacacttcgaagtgggagggtttatgacaataaggtacgcatgcctaaatcttccaactcccatttgaatgtgcatgatgacatgtatgctcccacttaccccacatcacattcttatgatacacatgtttccatccctatacatgattcccattcttcactttcatattctaatgatgatgatcatgtgttagtagaaaattgcattgatagtgatgatgataatttgttgcattcatatggagccaagggggaagaaaatgtacctcttctccatgttgttaatgataatgtgcatatgcatcgtacttttatttcaaaggaggatgggaaccggggggaagaaaatgtacccccgggaattggagtgggtgatgtgactttgtatgcaaaaggaagaaataagggggtggataaggaagtcggggaggaagaaaatgtacttcccggagatgcacaaggaaggaagacgtctttatctcattctacatcttcaaagtctcaagcttctaattcttcatctgcaccacctaagcatgtgcattttggccccactactcatttatcttcacctagggatcttcatcaaggggggagaaataaggcggaagctacttcatctacttctattgatacacatggtttatcctcgggtttgcgttctaatggttcaccgcctatttcgtcatctagtgagcatcgggaacaacatcaagggggaagtaataaggaggaagactattctcatgtacctatggattctagggataggagtagactgatccattctacactaggcgaggccttgagggctaagaaccctagtgggacggttaccacccttaggggttcaagggggagtctcactttttctccacctcttgatttgaactcatcggagcctagacttccctatccacaagttaagagggctcaagatcaaaagaagcggaaggagacacaaaagcaagagttcattgagctattcaagtccgttaacatcaatatcccattacttgatgccatcaagcaagtaccggcctatgcaaaatgtttgaaggacatgtgcactagtaagagaaagtttgtggagaatgaagatatatacttaagtgagcaagtatcggccgttcttcaaaagaggttgcctcctaagcttagtgaccccggatcttttactattccatgcaccattgggtcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Asp_protease_2 RVT_1 Retrotrans_gag rve

Protein Analysis

709

Amino Acids

77.26

Weight (kDa)

7.15

Isoelectric Point (pI)

51.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001407)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g10250 FvH4_4g10250 FvH4_6g21790
rosa_chinensis	RchiOBHm_Chr2g0133891 RchiOBHm_Chr3g0452821 RchiOBHm_Chr3g0452831 RchiOBHm_Chr5g0042701 RchiOBHm_Chr5g0080601 RchiOBHm_Chr6g0279391
rosa_multiflora	Rmu_co8061076.1_g000001 Rmu_co8477889.1_g000001 Rmu_co8492139.1_g000002 Rmu_sc0000083.1_g000025 Rmu_sc0000084.1_g000033 Rmu_sc0000239.1_g000083 Rmu_sc0000427.1_g000012 Rmu_sc0000677.1_g000017 Rmu_sc0000684.1_g000015 Rmu_sc0000893.1_g000006 Rmu_sc0001047.1_g000017 Rmu_sc0001124.1_g000001 Rmu_sc0001353.1_g000052 Rmu_sc0001575.1_g000031 Rmu_sc0001687.1_g000017 Rmu_sc0002083.1_g000017 Rmu_sc0002083.1_g000018 Rmu_sc0002319.1_g000002 Rmu_sc0002385.1_g000007 Rmu_sc0002472.1_g000033 Rmu_sc0002564.1_g000008 Rmu_sc0002564.1_g000009 Rmu_sc0002702.1_g000010 Rmu_sc0003499.1_g000003 Rmu_sc0003527.1_g000011 Rmu_sc0003882.1_g000025 Rmu_sc0003882.1_g000047 Rmu_sc0004191.1_g000027 Rmu_sc0004431.1_g000007 Rmu_sc0005670.1_g000007 Rmu_sc0006954.1_g000001 Rmu_sc0008128.1_g000002 Rmu_sc0012865.1_g000004 Rmu_sc0013815.1_g000001 Rmu_sc0017745.1_g000001 Rmu_ssc0000350.1_g000007
rosa_roxburghii	Rroxscaffold_1G00030490 Rroxscaffold_2G00129400 Rroxscaffold_3G00218530 Rroxscaffold_4G00320090 Rroxscaffold_4G00322270
rosa_samantha	Rh1CG054500 Rh5BG351400
rosa_wichuraiana	Rw5G029510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1400
AccB1I	GGYRCC	1 cut(s)	614
AccI	GTMKAC	1 cut(s)	1702
AccIII	TCCGGA	2 cut(s)	244, 641
AciI	CCGC	4 cut(s)	708, 1532, 1601, 1876
AclWI	GGATC	5 cut(s)	299, 897, 1512, 1702, 2104
AcoI	YGGCCR	2 cut(s)	705, 2052
AcsI	RAATTY	4 cut(s)	64, 104, 248, 349
AcyI	GRCGYC	1 cut(s)	1397
AdeI	CACNNNGTG	2 cut(s)	806, 869
AfaI	GTAC	7 cut(s)	963, 1191, 1234, 1278, 1368, 1677, 1962
AfiI	CCNNNNNNNGG	2 cut(s)	1289, 1770
AflII	CTTAAG	1 cut(s)	2035
AflIII	ACRYGT	5 cut(s)	154, 904, 1008, 1051, 1989
AhlI	ACTAGT	1 cut(s)	1997
AjiI	CACGTC	1 cut(s)	860
AleI	CACNNNNGTG	1 cut(s)	393
AluBI	AGCT	9 cut(s)	266, 272, 597, 842, 914, 1433, 1538, 1909, 2083
AluI	AGCT	9 cut(s)	266, 272, 597, 842, 914, 1433, 1538, 1909, 2083
Alw21I	GWGCWC	2 cut(s)	859, 1997
Alw26I	GTCTC	6 cut(s)	204, 690, 895, 1431, 1793, 1877
Alw44I	GTGCAC	1 cut(s)	1993
AlwI	GGATC	5 cut(s)	299, 897, 1512, 1702, 2104
Ama87I	CYCGRG	2 cut(s)	1282, 1576
Aor13HI	TCCGGA	2 cut(s)	244, 641
AoxI	GGCC	9 cut(s)	290, 424, 523, 530, 705, 1474, 1728, 1965, 2052
ApaLI	GTGCAC	1 cut(s)	1993
ApeKI	GCWGC	1 cut(s)	496
ApoI	RAATTY	4 cut(s)	64, 104, 248, 349
ArsI	GACNNNNNNTTYG	2 cut(s)	89, 121
AseI	ATTAAT	1 cut(s)	276
AspA2I	CCTAGG	1 cut(s)	1499
AspLEI	GCGC	1 cut(s)	127
AspS9I	GGNCC	3 cut(s)	530, 823, 1475
AsuC2I	CCSGG	6 cut(s)	330, 1262, 1283, 1284, 1374, 2094
AsuHPI	GGTGA	3 cut(s)	1310, 1488, 1590
AsuII	TTCGAA	1 cut(s)	934
AvaI	CYCGRG	2 cut(s)	1282, 1576
AvaII	GGWCC	1 cut(s)	823
AvrII	CCTAGG	1 cut(s)	1499
AxyI	CCTNAGG	1 cut(s)	1769
BaeGI	GKGCMC	1 cut(s)	1997
BaeI	ACNNNNGTAYC	2 cut(s)	1038, 1071
BanI	GGYRCC	1 cut(s)	614
BanII	GRGCYC	2 cut(s)	568, 1861
BarI	GAAGNNNNNNTAC	6 cut(s)	1173, 1205, 1260, 1292, 1350, 1382
BauI	CACGAG	1 cut(s)	9
BbsI	GAAGAC	6 cut(s)	141, 369, 440, 758, 1400, 1668
Bbv12I	GWGCWC	2 cut(s)	859, 1997
BbvI	GCAGC	1 cut(s)	508
BccI	CCATC	6 cut(s)	47, 359, 541, 1067, 1247, 1958
BceAI	ACGGC	1 cut(s)	2039
BcgI	CGANNNNNNTGC	2 cut(s)	1211, 1245
BclI	TGATCA	2 cut(s)	757, 1108
BcnI	CCSGG	6 cut(s)	330, 1262, 1283, 1284, 1374, 2094
BcoDI	GTCTC	6 cut(s)	204, 690, 895, 1431, 1793, 1877
BcuI	ACTAGT	1 cut(s)	1997
BfaI	CTAG	8 cut(s)	267, 1500, 1617, 1689, 1721, 1749, 1830, 1998
BfrI	CTTAAG	1 cut(s)	2035
BglI	GCCNNNNNGGC	1 cut(s)	1736
BisI	GCNGC	2 cut(s)	497, 708
BlnI	CCTAGG	1 cut(s)	1499
BlsI	GCNGC	2 cut(s)	498, 709
Bme1390I	CCNGG	6 cut(s)	330, 1262, 1283, 1284, 1374, 2094
Bme18I	GGWCC	1 cut(s)	823
BmeT110I	CYCGRG	2 cut(s)	1282, 1576
BmgBI	CACGTC	1 cut(s)	860
BmgT120I	GGNCC	3 cut(s)	530, 823, 1475
BmiI	GGNNCC	8 cut(s)	6, 565, 616, 675, 1171, 1259, 1477, 1827
BmrFI	CCNGG	6 cut(s)	330, 1262, 1283, 1284, 1374, 2094
BmsI	GCATC	6 cut(s)	102, 512, 1237, 1369, 1633, 1936
BpiI	GAAGAC	6 cut(s)	141, 369, 440, 758, 1400, 1668
BplI	GAGNNNNNCTC	2 cut(s)	2059, 2091
Bpu10I	CCTNAGC	3 cut(s)	915, 1458, 2079
Bpu14I	TTCGAA	1 cut(s)	934
BpuEI	CTTGAG	7 cut(s)	95, 504, 564, 765, 1413, 1753, 1845
BpuMI	CCSGG	6 cut(s)	330, 1262, 1283, 1284, 1374, 2094
BsaBI	GATNNNNATC	3 cut(s)	894, 1107, 1509
BsaHI	GRCGYC	1 cut(s)	1397
BsaJI	CCNNGG	9 cut(s)	391, 526, 1173, 1261, 1281, 1282, 1499, 1575, 2092
BsaWI	WCCGGW	3 cut(s)	244, 641, 886
BsaXI	ACNNNNNCTCC	4 cut(s)	1182, 1212, 1783, 1813
Bsc4I	CCNNNNNNNGG	2 cut(s)	1289, 1770
Bse118I	RCCGGY	1 cut(s)	1963
Bse1I	ACTGG	1 cut(s)	675
Bse21I	CCTNAGG	1 cut(s)	1769
Bse8I	GATNNNNATC	3 cut(s)	894, 1107, 1509
BseAI	TCCGGA	2 cut(s)	244, 641
BseDI	CCNNGG	9 cut(s)	391, 526, 1173, 1261, 1281, 1282, 1499, 1575, 2092
BseGI	GGATG	4 cut(s)	370, 700, 1059, 1258
BseJI	GATNNNNATC	3 cut(s)	894, 1107, 1509
BseLI	CCNNNNNNNGG	2 cut(s)	1289, 1770
BseMII	CTCAG	1 cut(s)	890
BseNI	ACTGG	1 cut(s)	675
BseRI	GAGGAG	3 cut(s)	192, 272, 576
BseSI	GKGCMC	1 cut(s)	1997
BseX3I	CGGCCG	1 cut(s)	2052
BseXI	GCAGC	1 cut(s)	508
BsgI	GTGCAG	1 cut(s)	1434
Bsh1285I	CGRYCG	1 cut(s)	2055
BshFI	GGCC	9 cut(s)	292, 426, 525, 532, 707, 1476, 1730, 1967, 2054
BshNI	GGYRCC	1 cut(s)	614
BsiEI	CGRYCG	1 cut(s)	2055
BsiHKAI	GWGCWC	2 cut(s)	859, 1997
BsiHKCI	CYCGRG	2 cut(s)	1282, 1576
BsiSI	CCGG	9 cut(s)	245, 329, 642, 887, 1261, 1283, 1374, 1964, 2094
BslFI	GGGAC	2 cut(s)	846, 1768
BslI	CCNNNNNNNGG	2 cut(s)	1289, 1770
BsmAI	GTCTC	6 cut(s)	204, 690, 895, 1431, 1793, 1877
BsmFI	GGGAC	2 cut(s)	846, 1768
BsmI	GAATGC	1 cut(s)	1159
BsnI	GGCC	9 cut(s)	292, 426, 525, 532, 707, 1476, 1730, 1967, 2054
BsoBI	CYCGRG	2 cut(s)	1282, 1576
Bsp119I	TTCGAA	1 cut(s)	934
Bsp1286I	GDGCHC	4 cut(s)	568, 859, 1861, 1997
Bsp13I	TCCGGA	2 cut(s)	244, 641
Bsp143I	GATC	8 cut(s)	304, 757, 889, 1108, 1504, 1707, 1864, 2096
BspACI	CCGC	4 cut(s)	708, 1532, 1601, 1876
BspANI	GGCC	9 cut(s)	292, 426, 525, 532, 707, 1476, 1730, 1967, 2054
BspCNI	CTCAG	1 cut(s)	891
BspEI	TCCGGA	2 cut(s)	244, 641
BspHI	TCATGA	2 cut(s)	217, 2126
BspLI	GGNNCC	8 cut(s)	6, 565, 616, 675, 1171, 1259, 1477, 1827
BspPI	GGATC	5 cut(s)	299, 897, 1512, 1702, 2104
BspT104I	TTCGAA	1 cut(s)	934
BspT107I	GGYRCC	1 cut(s)	614
BspTI	CTTAAG	1 cut(s)	2035
BsrFI	RCCGGY	1 cut(s)	1963
BsrI	ACTGG	1 cut(s)	675
BssAI	RCCGGY	1 cut(s)	1963
BssECI	CCNNGG	9 cut(s)	391, 526, 1173, 1261, 1281, 1282, 1499, 1575, 2092
BssMI	GATC	8 cut(s)	304, 757, 889, 1108, 1504, 1707, 1864, 2096
BssNI	GRCGYC	1 cut(s)	1397
BssSI	CACGAG	1 cut(s)	9
BssT1I	CCWWGG	4 cut(s)	391, 526, 1173, 1499
Bst2BI	CACGAG	1 cut(s)	9
Bst4CI	ACNGT	2 cut(s)	455, 1759
Bst6I	CTCTTC	1 cut(s)	1200
BstACI	GRCGYC	1 cut(s)	1397
BstAFI	CTTAAG	1 cut(s)	2035
BstBI	TTCGAA	1 cut(s)	934
BstC8I	GCNNGC	6 cut(s)	264, 501, 660, 798, 912, 968
BstDEI	CTNAG	8 cut(s)	851, 899, 915, 1458, 1740, 1769, 2079, 2084
BstEII	GGTNACC	1 cut(s)	1759
BstF5I	GGATG	4 cut(s)	370, 700, 1059, 1258
BstHHI	GCGC	1 cut(s)	127
BstKTI	GATC	8 cut(s)	307, 760, 892, 1111, 1507, 1710, 1867, 2099
BstMAI	GTCTC	6 cut(s)	204, 690, 895, 1431, 1793, 1877
BstMBI	GATC	8 cut(s)	304, 757, 889, 1108, 1504, 1707, 1864, 2096
BstMCI	CGRYCG	1 cut(s)	2055
BstMWI	GCNNNNNNNGC	3 cut(s)	551, 1736, 2080
BstNSI	RCATGY	8 cut(s)	158, 554, 908, 970, 1012, 1055, 1466, 1993
BstPI	GGTNACC	1 cut(s)	1759
BstSCI	CCNGG	6 cut(s)	328, 1260, 1281, 1282, 1372, 2092
BstSLI	GKGCMC	1 cut(s)	1997
BstV1I	GCAGC	1 cut(s)	508
BstV2I	GAAGAC	6 cut(s)	141, 369, 440, 758, 1400, 1668
BstX2I	RGATCY	2 cut(s)	1504, 2096
BstXI	CCANNNNNNTGG	1 cut(s)	608
BstYI	RGATCY	2 cut(s)	1504, 2096
BstZI	CGGCCG	1 cut(s)	2052
Bsu36I	CCTNAGG	1 cut(s)	1769
BsuRI	GGCC	9 cut(s)	292, 426, 525, 532, 707, 1476, 1730, 1967, 2054
BtrI	CACGTC	1 cut(s)	860
BtsCI	GGATG	4 cut(s)	370, 700, 1059, 1258
Cac8I	GCNNGC	6 cut(s)	264, 501, 660, 798, 912, 968
CciI	TCATGA	2 cut(s)	217, 2126
CfoI	GCGC	1 cut(s)	127
Cfr10I	RCCGGY	1 cut(s)	1963
Cfr13I	GGNCC	3 cut(s)	530, 823, 1475
Cfr9I	CCCGGG	1 cut(s)	1282
Csp6I	GTAC	7 cut(s)	962, 1190, 1233, 1277, 1367, 1676, 1961
CviQI	GTAC	7 cut(s)	962, 1190, 1233, 1277, 1367, 1676, 1961
DdeI	CTNAG	8 cut(s)	851, 899, 915, 1458, 1740, 1769, 2079, 2084
DpnI	GATC	8 cut(s)	306, 759, 891, 1110, 1506, 1709, 1866, 2098
DpnII	GATC	8 cut(s)	304, 757, 889, 1108, 1504, 1707, 1864, 2096
DraIII	CACNNNGTG	2 cut(s)	806, 869
EaeI	YGGCCR	2 cut(s)	705, 2052
EagI	CGGCCG	1 cut(s)	2052
Eam1104I	CTCTTC	1 cut(s)	1200
EarI	CTCTTC	1 cut(s)	1200
EciI	GGCGGA	1 cut(s)	1547
EclXI	CGGCCG	1 cut(s)	2052
Eco130I	CCWWGG	4 cut(s)	391, 526, 1173, 1499
Eco147I	AGGCCT	2 cut(s)	426, 1730
Eco24I	GRGCYC	2 cut(s)	568, 1861
Eco47I	GGWCC	1 cut(s)	823
Eco52I	CGGCCG	1 cut(s)	2052
Eco81I	CCTNAGG	1 cut(s)	1769
Eco88I	CYCGRG	2 cut(s)	1282, 1576
Eco91I	GGTNACC	1 cut(s)	1759
EcoO65I	GGTNACC	1 cut(s)	1759
EcoRI	GAATTC	1 cut(s)	64
EcoT14I	CCWWGG	4 cut(s)	391, 526, 1173, 1499
EcoT22I	ATGCAT	1 cut(s)	1230
EcoT38I	GRGCYC	2 cut(s)	568, 1861
ErhI	CCWWGG	4 cut(s)	391, 526, 1173, 1499
FalI	AAGNNNNNCTT	2 cut(s)	712, 744
FaqI	GGGAC	2 cut(s)	846, 1768
FauNDI	CATATG	4 cut(s)	409, 690, 1165, 1224
FbaI	TGATCA	2 cut(s)	757, 1108
FblI	GTMKAC	1 cut(s)	1702
Fnu4HI	GCNGC	2 cut(s)	497, 708
FokI	GGATG	4 cut(s)	377, 707, 1046, 1265
FriOI	GRGCYC	2 cut(s)	568, 1861
Fsp4HI	GCNGC	2 cut(s)	497, 708
FspBI	CTAG	8 cut(s)	267, 1500, 1617, 1689, 1721, 1749, 1830, 1998
GlaI	GCGC	1 cut(s)	126
GluI	GCNGC	2 cut(s)	497, 708
HaeIII	GGCC	9 cut(s)	292, 426, 525, 532, 707, 1476, 1730, 1967, 2054
HapII	CCGG	9 cut(s)	245, 329, 642, 887, 1261, 1283, 1374, 1964, 2094
HhaI	GCGC	1 cut(s)	127
Hin1I	GRCGYC	1 cut(s)	1397
Hin6I	GCGC	1 cut(s)	125
HinP1I	GCGC	1 cut(s)	125
HincII	GTYRAC	1 cut(s)	1924
HindII	GTYRAC	1 cut(s)	1924
HindIII	AAGCTT	2 cut(s)	1431, 2081
HinfI	GANTC	5 cut(s)	197, 418, 1073, 1685, 1786
HpaI	GTTAAC	1 cut(s)	1924
HpaII	CCGG	9 cut(s)	245, 329, 642, 887, 1261, 1283, 1374, 1964, 2094
HphI	GGTGA	3 cut(s)	1310, 1488, 1590
Hpy166II	GTNNAC	6 cut(s)	479, 863, 1598, 1703, 1924, 1995
Hpy188I	TCNGA	2 cut(s)	900, 1825
Hpy188III	TCNNGA	8 cut(s)	160, 218, 245, 642, 1628, 1808, 1862, 2127
Hpy8I	GTNNAC	6 cut(s)	479, 863, 1598, 1703, 1924, 1995
Hpy99I	CGWCG	1 cut(s)	148
HpyAV	CCTTC	6 cut(s)	80, 355, 648, 1383, 1873, 1978
HpyCH4III	ACNGT	2 cut(s)	455, 1759
HpyCH4IV	ACGT	3 cut(s)	846, 859, 1397
HpyF10VI	GCNNNNNNNGC	3 cut(s)	551, 1736, 2080
HpyF3I	CTNAG	8 cut(s)	851, 899, 915, 1458, 1740, 1769, 2079, 2084
HpySE526I	ACGT	3 cut(s)	846, 859, 1397
Hsp92I	GRCGYC	1 cut(s)	1397
HspAI	GCGC	1 cut(s)	125
Kpn2I	TCCGGA	2 cut(s)	244, 641
Ksp22I	TGATCA	2 cut(s)	757, 1108
KspAI	GTTAAC	1 cut(s)	1924
Kzo9I	GATC	8 cut(s)	304, 757, 889, 1108, 1504, 1707, 1864, 2096
LmnI	GCTCC	8 cut(s)	4, 259, 563, 602, 640, 1021, 1169, 1825
Lsp1109I	GCAGC	1 cut(s)	508
LweI	GCATC	6 cut(s)	102, 512, 1237, 1369, 1633, 1936
MaeI	CTAG	8 cut(s)	267, 1500, 1617, 1689, 1721, 1749, 1830, 1998
MaeII	ACGT	3 cut(s)	846, 859, 1397
MaeIII	GTNAC	5 cut(s)	224, 338, 1303, 1759, 2087
MalI	GATC	8 cut(s)	306, 759, 891, 1110, 1506, 1709, 1866, 2098
MboI	GATC	8 cut(s)	304, 757, 889, 1108, 1504, 1707, 1864, 2096
MflI	RGATCY	2 cut(s)	1504, 2096
MhlI	GDGCHC	4 cut(s)	568, 859, 1861, 1997
MlyI	GAGTC	2 cut(s)	206, 1795
MmeI	TCCRAC	1 cut(s)	1005
Mph1103I	ATGCAT	1 cut(s)	1230
MroI	TCCGGA	2 cut(s)	244, 641
MseI	TTAA	7 cut(s)	276, 429, 768, 1209, 1851, 1923, 2036
MslI	CAYNNNNRTG	8 cut(s)	393, 408, 456, 555, 693, 993, 1041, 1164
MspCI	CTTAAG	1 cut(s)	2035
MspI	CCGG	9 cut(s)	245, 329, 642, 887, 1261, 1283, 1374, 1964, 2094
MspR9I	CCNGG	6 cut(s)	330, 1262, 1283, 1284, 1374, 2094
Mva1269I	GAATGC	1 cut(s)	1159
MwoI	GCNNNNNNNGC	3 cut(s)	551, 1736, 2080
NciI	CCSGG	6 cut(s)	330, 1262, 1283, 1284, 1374, 2094
NdeI	CATATG	4 cut(s)	409, 690, 1165, 1224
NdeII	GATC	8 cut(s)	304, 757, 889, 1108, 1504, 1707, 1864, 2096
NlaIV	GGNNCC	8 cut(s)	6, 565, 616, 675, 1171, 1259, 1477, 1827
NmuCI	GTSAC	3 cut(s)	224, 1303, 2087
NsiI	ATGCAT	1 cut(s)	1230
NspI	RCATGY	8 cut(s)	158, 554, 908, 970, 1012, 1055, 1466, 1993
NspV	TTCGAA	1 cut(s)	934
OliI	CACNNNNGTG	1 cut(s)	393
PaeI	GCATGC	1 cut(s)	970
PagI	TCATGA	2 cut(s)	217, 2126
PceI	AGGCCT	2 cut(s)	426, 1730
PciI	ACATGT	5 cut(s)	154, 904, 1008, 1051, 1989
PctI	GAATGC	1 cut(s)	1159
PfeI	GAWTC	3 cut(s)	418, 1073, 1685
PfoI	TCCNGGA	1 cut(s)	1372
PkrI	GCNGC	2 cut(s)	498, 709
PleI	GAGTC	2 cut(s)	205, 1794
PpsI	GAGTC	2 cut(s)	205, 1794
PscI	ACATGT	5 cut(s)	154, 904, 1008, 1051, 1989
PshBI	ATTAAT	1 cut(s)	276
PspEI	GGTNACC	1 cut(s)	1759
PspN4I	GGNNCC	8 cut(s)	6, 565, 616, 675, 1171, 1259, 1477, 1827
PspPI	GGNCC	3 cut(s)	530, 823, 1475
PsrI	GAACNNNNNNTAC	2 cut(s)	2040, 2072
PsuI	RGATCY	2 cut(s)	1504, 2096
RsaI	GTAC	7 cut(s)	963, 1191, 1234, 1278, 1368, 1677, 1962
RsaNI	GTAC	7 cut(s)	962, 1190, 1233, 1277, 1367, 1676, 1961
RseI	CAYNNNNRTG	8 cut(s)	393, 408, 456, 555, 693, 993, 1041, 1164
SaqAI	TTAA	7 cut(s)	276, 429, 768, 1209, 1851, 1923, 2036
SatI	GCNGC	2 cut(s)	497, 708
Sau3AI	GATC	8 cut(s)	304, 757, 889, 1108, 1504, 1707, 1864, 2096
Sau96I	GGNCC	3 cut(s)	530, 823, 1475
SchI	GAGTC	2 cut(s)	206, 1795
ScrFI	CCNGG	6 cut(s)	330, 1262, 1283, 1284, 1374, 2094
SduI	GDGCHC	4 cut(s)	568, 859, 1861, 1997
SfaNI	GCATC	6 cut(s)	102, 512, 1237, 1369, 1633, 1936
SfuI	TTCGAA	1 cut(s)	934
SinI	GGWCC	1 cut(s)	823
SmaI	CCCGGG	1 cut(s)	1284
SmiMI	CAYNNNNRTG	8 cut(s)	393, 408, 456, 555, 693, 993, 1041, 1164
SmlI	CTYRAG	8 cut(s)	74, 519, 579, 780, 1428, 1732, 1860, 2035
SmoI	CTYRAG	8 cut(s)	74, 519, 579, 780, 1428, 1732, 1860, 2035
SpeI	ACTAGT	1 cut(s)	1997
SphI	GCATGC	1 cut(s)	970
SseBI	AGGCCT	2 cut(s)	426, 1730
SsiI	CCGC	4 cut(s)	708, 1532, 1601, 1876
SspI	AATATT	1 cut(s)	772
SspMI	CTAG	8 cut(s)	267, 1500, 1617, 1689, 1721, 1749, 1830, 1998
StuI	AGGCCT	2 cut(s)	426, 1730
StyD4I	CCNGG	6 cut(s)	328, 1260, 1281, 1282, 1372, 2092
StyI	CCWWGG	4 cut(s)	391, 526, 1173, 1499
TaaI	ACNGT	2 cut(s)	455, 1759
TaiI	ACGT	3 cut(s)	849, 862, 1400
TaqI	TCGA	2 cut(s)	84, 934
TatI	WGTACW	1 cut(s)	1366
TauI	GCSGC	1 cut(s)	710
TfiI	GAWTC	3 cut(s)	418, 1073, 1685
Tru1I	TTAA	7 cut(s)	276, 429, 768, 1209, 1851, 1923, 2036
Tru9I	TTAA	7 cut(s)	276, 429, 768, 1209, 1851, 1923, 2036
TseFI	GTSAC	3 cut(s)	224, 1303, 2087
TseI	GCWGC	1 cut(s)	496
Tsp45I	GTSAC	3 cut(s)	224, 1303, 2087
TspGWI	ACGGA	1 cut(s)	1909
TspMI	CCCGGG	1 cut(s)	1282
Vha464I	CTTAAG	1 cut(s)	2035
VneI	GTGCAC	1 cut(s)	1993
VpaK11BI	GGWCC	1 cut(s)	823
VspI	ATTAAT	1 cut(s)	276
XapI	RAATTY	4 cut(s)	64, 104, 248, 349
XceI	RCATGY	8 cut(s)	158, 554, 908, 970, 1012, 1055, 1466, 1993
XcmI	CCANNNNNNNNNTGG	1 cut(s)	354
XmaI	CCCGGG	1 cut(s)	1282
XmaJI	CCTAGG	1 cut(s)	1499
XmiI	GTMKAC	1 cut(s)	1702
XspI	CTAG	8 cut(s)	267, 1500, 1617, 1689, 1721, 1749, 1830, 1998
ZraI	GACGTC	1 cut(s)	1398
Zsp2I	ATGCAT	1 cut(s)	1230

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.