transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 265 |
| AfaI | GTAC | 2 cut(s) | 278, 303 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 15 |
| AflIII | ACRYGT | 1 cut(s) | 234 |
| AgsI | TTSAA | 4 cut(s) | 24, 160, 229, 308 |
| AluBI | AGCT | 3 cut(s) | 154, 289, 328 |
| AluI | AGCT | 3 cut(s) | 154, 289, 328 |
| Alw21I | GWGCWC | 1 cut(s) | 242 |
| Alw26I | GTCTC | 1 cut(s) | 38 |
| Alw44I | GTGCAC | 1 cut(s) | 238 |
| ApaLI | GTGCAC | 1 cut(s) | 238 |
| AxyI | CCTNAGG | 1 cut(s) | 14 |
| BaeGI | GKGCMC | 2 cut(s) | 242, 337 |
| BanII | GRGCYC | 1 cut(s) | 106 |
| Bbv12I | GWGCWC | 1 cut(s) | 242 |
| BccI | CCATC | 1 cut(s) | 73 |
| BcoDI | GTCTC | 1 cut(s) | 38 |
| BfaI | CTAG | 1 cut(s) | 75 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 304, 336 |
| Bpu10I | CCTNAGC | 1 cut(s) | 324 |
| BpuEI | CTTGAG | 1 cut(s) | 75 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 28, 58 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 15 |
| Bse21I | CCTNAGG | 1 cut(s) | 14 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 15 |
| BseSI | GKGCMC | 2 cut(s) | 242, 337 |
| BsiHKAI | GWGCWC | 1 cut(s) | 242 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 15 |
| BsmAI | GTCTC | 1 cut(s) | 38 |
| Bsp1286I | GDGCHC | 3 cut(s) | 106, 242, 337 |
| Bsp143I | GATC | 1 cut(s) | 109 |
| BssMI | GATC | 1 cut(s) | 109 |
| Bst6I | CTCTTC | 1 cut(s) | 113 |
| BstDEI | CTNAG | 3 cut(s) | 14, 324, 329 |
| BstEII | GGTNACC | 1 cut(s) | 4 |
| BstKTI | GATC | 1 cut(s) | 112 |
| BstMAI | GTCTC | 1 cut(s) | 38 |
| BstMBI | GATC | 1 cut(s) | 109 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 325 |
| BstNSI | RCATGY | 1 cut(s) | 238 |
| BstPI | GGTNACC | 1 cut(s) | 4 |
| BstSLI | GKGCMC | 2 cut(s) | 242, 337 |
| Bsu36I | CCTNAGG | 1 cut(s) | 14 |
| BtsIMutI | CAGTG | 1 cut(s) | 289 |
| Csp6I | GTAC | 2 cut(s) | 277, 302 |
| CviAII | CATG | 1 cut(s) | 235 |
| CviJI | RGCY | 5 cut(s) | 73, 104, 154, 289, 328 |
| CviKI_1 | RGCY | 5 cut(s) | 73, 104, 154, 289, 328 |
| CviQI | GTAC | 2 cut(s) | 277, 302 |
| DdeI | CTNAG | 3 cut(s) | 14, 324, 329 |
| DpnI | GATC | 1 cut(s) | 111 |
| DpnII | GATC | 1 cut(s) | 109 |
| Eam1104I | CTCTTC | 1 cut(s) | 113 |
| EarI | CTCTTC | 1 cut(s) | 113 |
| Eco24I | GRGCYC | 1 cut(s) | 106 |
| Eco57I | CTGAAG | 1 cut(s) | 265 |
| Eco81I | CCTNAGG | 1 cut(s) | 14 |
| Eco91I | GGTNACC | 1 cut(s) | 4 |
| EcoO65I | GGTNACC | 1 cut(s) | 4 |
| EcoT38I | GRGCYC | 1 cut(s) | 106 |
| FaeI | CATG | 1 cut(s) | 238 |
| FaiI | YATR | 2 cut(s) | 216, 236 |
| FatI | CATG | 1 cut(s) | 234 |
| FriOI | GRGCYC | 1 cut(s) | 106 |
| FspBI | CTAG | 1 cut(s) | 75 |
| Hin1II | CATG | 1 cut(s) | 238 |
| HincII | GTYRAC | 1 cut(s) | 169 |
| HindII | GTYRAC | 1 cut(s) | 169 |
| HindIII | AAGCTT | 1 cut(s) | 326 |
| HinfI | GANTC | 2 cut(s) | 31, 61 |
| HpaI | GTTAAC | 1 cut(s) | 169 |
| Hpy166II | GTNNAC | 2 cut(s) | 169, 240 |
| Hpy188I | TCNGA | 1 cut(s) | 210 |
| Hpy188III | TCNNGA | 1 cut(s) | 53 |
| Hpy8I | GTNNAC | 2 cut(s) | 169, 240 |
| HpyAV | CCTTC | 2 cut(s) | 118, 223 |
| HpyCH4V | TGCA | 1 cut(s) | 240 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 325 |
| HpyF3I | CTNAG | 3 cut(s) | 14, 324, 329 |
| Hsp92II | CATG | 1 cut(s) | 238 |
| KspAI | GTTAAC | 1 cut(s) | 169 |
| Kzo9I | GATC | 1 cut(s) | 109 |
| MaeI | CTAG | 1 cut(s) | 75 |
| MaeIII | GTNAC | 1 cut(s) | 4 |
| MalI | GATC | 1 cut(s) | 111 |
| MboI | GATC | 1 cut(s) | 109 |
| MboII | GAAGA | 3 cut(s) | 33, 130, 262 |
| MhlI | GDGCHC | 3 cut(s) | 106, 242, 337 |
| MlyI | GAGTC | 2 cut(s) | 40, 55 |
| MmeI | TCCRAC | 1 cut(s) | 233 |
| MnlI | CCTC | 5 cut(s) | 60, 99, 114, 306, 330 |
| MseI | TTAA | 3 cut(s) | 96, 168, 189 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 325 |
| NdeII | GATC | 1 cut(s) | 109 |
| NlaIII | CATG | 1 cut(s) | 238 |
| NspI | RCATGY | 1 cut(s) | 238 |
| PciI | ACATGT | 1 cut(s) | 234 |
| PleI | GAGTC | 2 cut(s) | 39, 55 |
| PpsI | GAGTC | 2 cut(s) | 39, 55 |
| PscI | ACATGT | 1 cut(s) | 234 |
| PspEI | GGTNACC | 1 cut(s) | 4 |
| RsaI | GTAC | 2 cut(s) | 278, 303 |
| RsaNI | GTAC | 2 cut(s) | 277, 302 |
| SaqAI | TTAA | 3 cut(s) | 96, 168, 189 |
| Sau3AI | GATC | 1 cut(s) | 109 |
| SchI | GAGTC | 2 cut(s) | 40, 55 |
| SduI | GDGCHC | 3 cut(s) | 106, 242, 337 |
| SetI | ASST | 6 cut(s) | 52, 156, 215, 291, 317, 330 |
| SmlI | CTYRAG | 1 cut(s) | 90 |
| SmoI | CTYRAG | 1 cut(s) | 90 |
| SspMI | CTAG | 1 cut(s) | 75 |
| Tru1I | TTAA | 3 cut(s) | 96, 168, 189 |
| Tru9I | TTAA | 3 cut(s) | 96, 168, 189 |
| TscAI | CASTG | 1 cut(s) | 289 |
| TspDTI | ATGAA | 1 cut(s) | 136 |
| TspGWI | ACGGA | 1 cut(s) | 154 |
| TspRI | CASTG | 1 cut(s) | 289 |
| VneI | GTGCAC | 1 cut(s) | 238 |
| XceI | RCATGY | 1 cut(s) | 238 |
| XspI | CTAG | 1 cut(s) | 75 |