Gamma-soluble nsf attachment
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Syja_N | PF02383 | 72 - 341 | 4.4e-69 | SacI homology domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 95, 611 |
| AatII | GACGTC | 1 cut(s) | 851 |
| AccI | GTMKAC | 2 cut(s) | 206, 912 |
| AccII | CGCG | 1 cut(s) | 147 |
| AccIII | TCCGGA | 1 cut(s) | 85 |
| AciI | CCGC | 8 cut(s) | 42, 142, 145, 164, 728, 1109, 1610, 1725 |
| AcoI | YGGCCR | 2 cut(s) | 504, 1489 |
| AcsI | RAATTY | 3 cut(s) | 731, 1033, 1289 |
| AcuI | CTGAAG | 2 cut(s) | 743, 1586 |
| AcyI | GRCGYC | 1 cut(s) | 848 |
| AfaI | GTAC | 4 cut(s) | 437, 643, 1521, 1644 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 125, 170, 1359 |
| AgeI | ACCGGT | 1 cut(s) | 1549 |
| AjnI | CCWGG | 1 cut(s) | 427 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1498, 1530 |
| Alw21I | GWGCWC | 1 cut(s) | 1423 |
| Alw26I | GTCTC | 2 cut(s) | 893, 962 |
| Aor13HI | TCCGGA | 1 cut(s) | 85 |
| AoxI | GGCC | 3 cut(s) | 504, 1489, 1650 |
| ApeKI | GCWGC | 2 cut(s) | 1472, 1673 |
| ApoI | RAATTY | 3 cut(s) | 731, 1033, 1289 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 521, 553 |
| AsiGI | ACCGGT | 1 cut(s) | 1549 |
| AspS9I | GGNCC | 3 cut(s) | 1129, 1363, 1650 |
| AsuC2I | CCSGG | 1 cut(s) | 314 |
| AsuHPI | GGTGA | 6 cut(s) | 185, 328, 944, 953, 1328, 1693 |
| AvaII | GGWCC | 2 cut(s) | 1129, 1363 |
| BalI | TGGCCA | 2 cut(s) | 506, 1491 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1104, 1136 |
| BbsI | GAAGAC | 1 cut(s) | 484 |
| Bbv12I | GWGCWC | 1 cut(s) | 1423 |
| BbvI | GCAGC | 2 cut(s) | 1459, 1685 |
| BccI | CCATC | 7 cut(s) | 496, 1020, 1228, 1403, 1448, 1505, 1522 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 220, 254 |
| BciT130I | CCWGG | 1 cut(s) | 429 |
| BciVI | GTATCC | 1 cut(s) | 1085 |
| BcnI | CCSGG | 1 cut(s) | 314 |
| BcoDI | GTCTC | 2 cut(s) | 893, 962 |
| BfaI | CTAG | 3 cut(s) | 653, 1367, 1710 |
| BfuI | GTATCC | 1 cut(s) | 1085 |
| BglII | AGATCT | 1 cut(s) | 1148 |
| BisI | GCNGC | 3 cut(s) | 145, 1473, 1674 |
| BlpI | GCTNAGC | 1 cut(s) | 1308 |
| BlsI | GCNGC | 3 cut(s) | 146, 1474, 1675 |
| Bme1390I | CCNGG | 2 cut(s) | 314, 429 |
| Bme18I | GGWCC | 2 cut(s) | 1129, 1363 |
| BmgT120I | GGNCC | 3 cut(s) | 1129, 1363, 1650 |
| BmiI | GGNNCC | 1 cut(s) | 1364 |
| BmrFI | CCNGG | 2 cut(s) | 314, 429 |
| BmrI | ACTGGG | 1 cut(s) | 1216 |
| BmsI | GCATC | 5 cut(s) | 1096, 1167, 1207, 1459, 1565 |
| BmuI | ACTGGG | 1 cut(s) | 1216 |
| BpiI | GAAGAC | 1 cut(s) | 484 |
| BpmI | CTGGAG | 2 cut(s) | 411, 1145 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1308 |
| BpuEI | CTTGAG | 4 cut(s) | 354, 616, 826, 1352 |
| BpuMI | CCSGG | 1 cut(s) | 314 |
| BsaHI | GRCGYC | 1 cut(s) | 848 |
| BsaJI | CCNNGG | 1 cut(s) | 428 |
| BsaWI | WCCGGW | 2 cut(s) | 85, 1549 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1498, 1528 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 125, 170, 1359 |
| Bse118I | RCCGGY | 1 cut(s) | 1549 |
| Bse1I | ACTGG | 2 cut(s) | 1128, 1222 |
| Bse3DI | GCAATG | 1 cut(s) | 349 |
| BseAI | TCCGGA | 1 cut(s) | 85 |
| BseBI | CCWGG | 1 cut(s) | 429 |
| BseDI | CCNNGG | 1 cut(s) | 428 |
| BseGI | GGATG | 7 cut(s) | 507, 1222, 1239, 1419, 1459, 1474, 1516 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 125, 170, 1359 |
| BseMI | GCAATG | 1 cut(s) | 349 |
| BseMII | CTCAG | 4 cut(s) | 708, 1217, 1245, 1299 |
| BseNI | ACTGG | 2 cut(s) | 1128, 1222 |
| BseRI | GAGGAG | 1 cut(s) | 690 |
| BseXI | GCAGC | 2 cut(s) | 1459, 1685 |
| BseYI | CCCAGC | 1 cut(s) | 1340 |
| Bsh1236I | CGCG | 1 cut(s) | 147 |
| BshFI | GGCC | 3 cut(s) | 506, 1491, 1652 |
| BshTI | ACCGGT | 1 cut(s) | 1549 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1423 |
| BsiSI | CCGG | 6 cut(s) | 39, 86, 313, 1550, 1653, 1665 |
| BslFI | GGGAC | 4 cut(s) | 166, 670, 1357, 1376 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 125, 170, 1359 |
| BsmAI | GTCTC | 2 cut(s) | 893, 962 |
| BsmBI | CGTCTC | 1 cut(s) | 962 |
| BsmFI | GGGAC | 4 cut(s) | 166, 670, 1357, 1376 |
| BsnI | GGCC | 3 cut(s) | 506, 1491, 1652 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1423 |
| Bsp13I | TCCGGA | 1 cut(s) | 85 |
| Bsp143I | GATC | 6 cut(s) | 121, 135, 231, 877, 1148, 1477 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1308 |
| BspACI | CCGC | 8 cut(s) | 42, 142, 145, 164, 728, 1109, 1610, 1725 |
| BspANI | GGCC | 3 cut(s) | 506, 1491, 1652 |
| BspCNI | CTCAG | 4 cut(s) | 709, 1216, 1246, 1300 |
| BspEI | TCCGGA | 1 cut(s) | 85 |
| BspFNI | CGCG | 1 cut(s) | 147 |
| BspHI | TCATGA | 1 cut(s) | 874 |
| BspLI | GGNNCC | 1 cut(s) | 1364 |
| BsrDI | GCAATG | 1 cut(s) | 349 |
| BsrFI | RCCGGY | 1 cut(s) | 1549 |
| BsrI | ACTGG | 2 cut(s) | 1128, 1222 |
| BssAI | RCCGGY | 1 cut(s) | 1549 |
| BssECI | CCNNGG | 1 cut(s) | 428 |
| BssMI | GATC | 6 cut(s) | 121, 135, 231, 877, 1148, 1477 |
| BssNI | GRCGYC | 1 cut(s) | 848 |
| Bst2UI | CCWGG | 1 cut(s) | 429 |
| Bst4CI | ACNGT | 8 cut(s) | 8, 173, 415, 591, 1166, 1267, 1501, 1701 |
| Bst6I | CTCTTC | 3 cut(s) | 22, 667, 1272 |
| BstACI | GRCGYC | 1 cut(s) | 848 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 979 |
| BstC8I | GCNNGC | 4 cut(s) | 142, 243, 525, 1608 |
| BstDEI | CTNAG | 5 cut(s) | 717, 947, 1203, 1254, 1308 |
| BstF5I | GGATG | 7 cut(s) | 507, 1222, 1239, 1419, 1459, 1474, 1516 |
| BstFNI | CGCG | 1 cut(s) | 147 |
| BstKTI | GATC | 6 cut(s) | 124, 138, 234, 880, 1151, 1480 |
| BstMAI | GTCTC | 2 cut(s) | 893, 962 |
| BstMBI | GATC | 6 cut(s) | 121, 135, 231, 877, 1148, 1477 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 61, 979, 1612, 1670 |
| BstNI | CCWGG | 1 cut(s) | 429 |
| BstSCI | CCNGG | 2 cut(s) | 312, 427 |
| BstUI | CGCG | 1 cut(s) | 147 |
| BstV1I | GCAGC | 2 cut(s) | 1459, 1685 |
| BstV2I | GAAGAC | 1 cut(s) | 484 |
| BstX2I | RGATCY | 1 cut(s) | 1148 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 786, 893 |
| BstYI | RGATCY | 1 cut(s) | 1148 |
| BsuI | GTATCC | 1 cut(s) | 1085 |
| BsuRI | GGCC | 3 cut(s) | 506, 1491, 1652 |
| BtsCI | GGATG | 7 cut(s) | 507, 1222, 1239, 1419, 1459, 1474, 1516 |
| BtsI | GCAGTG | 1 cut(s) | 1683 |
| BtsIMutI | CAGTG | 1 cut(s) | 1683 |
| Cac8I | GCNNGC | 4 cut(s) | 142, 243, 525, 1608 |
| CciI | TCATGA | 1 cut(s) | 874 |
| Cfr10I | RCCGGY | 1 cut(s) | 1549 |
| Cfr13I | GGNCC | 3 cut(s) | 1129, 1363, 1650 |
| CseI | GACGC | 3 cut(s) | 489, 979, 1591 |
| Csp6I | GTAC | 4 cut(s) | 436, 642, 1520, 1643 |
| CspAI | ACCGGT | 1 cut(s) | 1549 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 840, 875 |
| CviAII | CATG | 4 cut(s) | 397, 875, 929, 1313 |
| CviQI | GTAC | 4 cut(s) | 436, 642, 1520, 1643 |
| DdeI | CTNAG | 5 cut(s) | 717, 947, 1203, 1254, 1308 |
| DpnI | GATC | 6 cut(s) | 123, 137, 233, 879, 1150, 1479 |
| DpnII | GATC | 6 cut(s) | 121, 135, 231, 877, 1148, 1477 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 95, 611 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 95, 611 |
| EaeI | YGGCCR | 2 cut(s) | 504, 1489 |
| Eam1104I | CTCTTC | 3 cut(s) | 22, 667, 1272 |
| EarI | CTCTTC | 3 cut(s) | 22, 667, 1272 |
| EciI | GGCGGA | 2 cut(s) | 57, 743 |
| Eco47I | GGWCC | 2 cut(s) | 1129, 1363 |
| Eco57I | CTGAAG | 2 cut(s) | 743, 1586 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1363 |
| EcoRII | CCWGG | 1 cut(s) | 427 |
| Esp3I | CGTCTC | 1 cut(s) | 962 |
| FaeI | CATG | 4 cut(s) | 400, 878, 932, 1316 |
| FaqI | GGGAC | 4 cut(s) | 166, 670, 1357, 1376 |
| FatI | CATG | 4 cut(s) | 396, 874, 928, 1312 |
| FauI | CCCGC | 2 cut(s) | 149, 1603 |
| FauNDI | CATATG | 1 cut(s) | 445 |
| FblI | GTMKAC | 2 cut(s) | 206, 912 |
| Fnu4HI | GCNGC | 3 cut(s) | 145, 1473, 1674 |
| FokI | GGATG | 7 cut(s) | 514, 1229, 1246, 1426, 1466, 1481, 1523 |
| Fsp4HI | GCNGC | 3 cut(s) | 145, 1473, 1674 |
| FspBI | CTAG | 3 cut(s) | 653, 1367, 1710 |
| GluI | GCNGC | 3 cut(s) | 145, 1473, 1674 |
| GsaI | CCCAGC | 1 cut(s) | 1344 |
| GsuI | CTGGAG | 2 cut(s) | 411, 1145 |
| HaeIII | GGCC | 3 cut(s) | 506, 1491, 1652 |
| HapII | CCGG | 6 cut(s) | 39, 86, 313, 1550, 1653, 1665 |
| HgaI | GACGC | 3 cut(s) | 489, 979, 1591 |
| Hin1I | GRCGYC | 1 cut(s) | 848 |
| Hin1II | CATG | 4 cut(s) | 400, 878, 932, 1316 |
| HincII | GTYRAC | 2 cut(s) | 207, 802 |
| HindII | GTYRAC | 2 cut(s) | 207, 802 |
| HindIII | AAGCTT | 1 cut(s) | 387 |
| HinfI | GANTC | 7 cut(s) | 12, 176, 219, 763, 1247, 1256, 1532 |
| HpaII | CCGG | 6 cut(s) | 39, 86, 313, 1550, 1653, 1665 |
| HphI | GGTGA | 6 cut(s) | 185, 328, 944, 953, 1328, 1693 |
| Hpy166II | GTNNAC | 6 cut(s) | 207, 310, 642, 802, 913, 944 |
| Hpy8I | GTNNAC | 6 cut(s) | 207, 310, 642, 802, 913, 944 |
| Hpy99I | CGWCG | 7 cut(s) | 101, 113, 152, 208, 211, 227, 651 |
| HpyAV | CCTTC | 5 cut(s) | 488, 683, 731, 932, 1106 |
| HpyCH4III | ACNGT | 8 cut(s) | 8, 173, 415, 591, 1166, 1267, 1501, 1701 |
| HpyCH4IV | ACGT | 4 cut(s) | 203, 848, 987, 996 |
| HpyCH4V | TGCA | 6 cut(s) | 76, 188, 245, 342, 1158, 1228 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 61, 979, 1612, 1670 |
| HpyF3I | CTNAG | 5 cut(s) | 717, 947, 1203, 1254, 1308 |
| HpySE526I | ACGT | 4 cut(s) | 203, 848, 987, 996 |
| Hsp92I | GRCGYC | 1 cut(s) | 848 |
| Hsp92II | CATG | 4 cut(s) | 400, 878, 932, 1316 |
| Kpn2I | TCCGGA | 1 cut(s) | 85 |
| Kzo9I | GATC | 6 cut(s) | 121, 135, 231, 877, 1148, 1477 |
| LmnI | GCTCC | 4 cut(s) | 121, 677, 790, 862 |
| Lsp1109I | GCAGC | 2 cut(s) | 1459, 1685 |
| LweI | GCATC | 5 cut(s) | 1096, 1167, 1207, 1459, 1565 |
| MaeI | CTAG | 3 cut(s) | 653, 1367, 1710 |
| MaeII | ACGT | 4 cut(s) | 203, 848, 987, 996 |
| MaeIII | GTNAC | 5 cut(s) | 316, 613, 1183, 1193, 1316 |
| MalI | GATC | 6 cut(s) | 123, 137, 233, 879, 1150, 1479 |
| MboI | GATC | 6 cut(s) | 121, 135, 231, 877, 1148, 1477 |
| MfeI | CAATTG | 1 cut(s) | 722 |
| MflI | RGATCY | 1 cut(s) | 1148 |
| MhlI | GDGCHC | 1 cut(s) | 1423 |
| MlsI | TGGCCA | 2 cut(s) | 506, 1491 |
| MluNI | TGGCCA | 2 cut(s) | 506, 1491 |
| MlyI | GAGTC | 2 cut(s) | 228, 1265 |
| MmeI | TCCRAC | 3 cut(s) | 48, 205, 479 |
| Mox20I | TGGCCA | 2 cut(s) | 506, 1491 |
| MroI | TCCGGA | 1 cut(s) | 85 |
| MscI | TGGCCA | 2 cut(s) | 506, 1491 |
| MseI | TTAA | 5 cut(s) | 458, 464, 599, 825, 1046 |
| MslI | CAYNNNNRTG | 4 cut(s) | 873, 933, 1020, 1265 |
| Msp20I | TGGCCA | 2 cut(s) | 506, 1491 |
| MspI | CCGG | 6 cut(s) | 39, 86, 313, 1550, 1653, 1665 |
| MspR9I | CCNGG | 2 cut(s) | 314, 429 |
| MunI | CAATTG | 1 cut(s) | 722 |
| MvaI | CCWGG | 1 cut(s) | 429 |
| MvnI | CGCG | 1 cut(s) | 147 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 61, 979, 1612, 1670 |
| NciI | CCSGG | 1 cut(s) | 314 |
| NdeI | CATATG | 1 cut(s) | 445 |
| NdeII | GATC | 6 cut(s) | 121, 135, 231, 877, 1148, 1477 |
| NlaIII | CATG | 4 cut(s) | 400, 878, 932, 1316 |
| NlaIV | GGNNCC | 1 cut(s) | 1364 |
| NmuCI | GTSAC | 3 cut(s) | 316, 613, 1316 |
| PagI | TCATGA | 1 cut(s) | 874 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 105, 117, 144, 156, 993 |
| PfeI | GAWTC | 5 cut(s) | 12, 176, 763, 1247, 1532 |
| PinAI | ACCGGT | 1 cut(s) | 1549 |
| PkrI | GCNGC | 3 cut(s) | 146, 1474, 1675 |
| PleI | GAGTC | 2 cut(s) | 227, 1264 |
| PpsI | GAGTC | 2 cut(s) | 227, 1264 |
| PpuMI | RGGWCCY | 1 cut(s) | 1363 |
| Psp5II | RGGWCCY | 1 cut(s) | 1363 |
| Psp6I | CCWGG | 1 cut(s) | 427 |
| PspFI | CCCAGC | 1 cut(s) | 1340 |
| PspGI | CCWGG | 1 cut(s) | 427 |
| PspN4I | GGNNCC | 1 cut(s) | 1364 |
| PspPI | GGNCC | 3 cut(s) | 1129, 1363, 1650 |
| PspPPI | RGGWCCY | 1 cut(s) | 1363 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1168, 1200 |
| PsuI | RGATCY | 1 cut(s) | 1148 |
| RsaI | GTAC | 4 cut(s) | 437, 643, 1521, 1644 |
| RsaNI | GTAC | 4 cut(s) | 436, 642, 1520, 1643 |
| RseI | CAYNNNNRTG | 4 cut(s) | 873, 933, 1020, 1265 |
| SalI | GTCGAC | 1 cut(s) | 205 |
| SaqAI | TTAA | 5 cut(s) | 458, 464, 599, 825, 1046 |
| SatI | GCNGC | 3 cut(s) | 145, 1473, 1674 |
| Sau3AI | GATC | 6 cut(s) | 121, 135, 231, 877, 1148, 1477 |
| Sau96I | GGNCC | 3 cut(s) | 1129, 1363, 1650 |
| SchI | GAGTC | 2 cut(s) | 228, 1265 |
| ScrFI | CCNGG | 2 cut(s) | 314, 429 |
| SduI | GDGCHC | 1 cut(s) | 1423 |
| SfaNI | GCATC | 5 cut(s) | 1096, 1167, 1207, 1459, 1565 |
| SgrDI | CGTCGACG | 1 cut(s) | 205 |
| SinI | GGWCC | 2 cut(s) | 1129, 1363 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 873, 933, 1020, 1265 |
| SmlI | CTYRAG | 4 cut(s) | 369, 631, 805, 1331 |
| SmoI | CTYRAG | 4 cut(s) | 369, 631, 805, 1331 |
| SsiI | CCGC | 8 cut(s) | 42, 142, 145, 164, 728, 1109, 1610, 1725 |
| SspI | AATATT | 1 cut(s) | 627 |
| SspMI | CTAG | 3 cut(s) | 653, 1367, 1710 |
| StyD4I | CCNGG | 2 cut(s) | 312, 427 |
| TaaI | ACNGT | 8 cut(s) | 8, 173, 415, 591, 1166, 1267, 1501, 1701 |
| TaiI | ACGT | 4 cut(s) | 206, 851, 990, 999 |
| TaqI | TCGA | 6 cut(s) | 111, 159, 206, 535, 573, 1161 |
| TatI | WGTACW | 2 cut(s) | 435, 1642 |
| TauI | GCSGC | 1 cut(s) | 147 |
| TfiI | GAWTC | 5 cut(s) | 12, 176, 763, 1247, 1532 |
| Tru1I | TTAA | 5 cut(s) | 458, 464, 599, 825, 1046 |
| Tru9I | TTAA | 5 cut(s) | 458, 464, 599, 825, 1046 |
| TscAI | CASTG | 1 cut(s) | 1683 |
| TseFI | GTSAC | 3 cut(s) | 316, 613, 1316 |
| TseI | GCWGC | 2 cut(s) | 1472, 1673 |
| Tsp45I | GTSAC | 3 cut(s) | 316, 613, 1316 |
| TspDTI | ATGAA | 9 cut(s) | 21, 341, 385, 399, 432, 462, 863, 951, 1290 |
| TspGWI | ACGGA | 2 cut(s) | 97, 183 |
| TspRI | CASTG | 1 cut(s) | 1683 |
| VpaK11BI | GGWCC | 2 cut(s) | 1129, 1363 |
| XapI | RAATTY | 3 cut(s) | 731, 1033, 1289 |
| XbaI | TCTAGA | 1 cut(s) | 1709 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1019 |
| XmiI | GTMKAC | 2 cut(s) | 206, 912 |
| XspI | CTAG | 3 cut(s) | 653, 1367, 1710 |
| ZraI | GACGTC | 1 cut(s) | 849 |