Rorug05G0513000

Basic form of pathogenesis-related protein 1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
69731199 .. 69734703
3505 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0513000.1

Sequence Viewer

Length: 1770 bp
ATGGCGGCAGCGTTGGAGTGCTGGTCGAGCCGGGCGAGTACGGACGAGGACATGGTGGAGCAGGCCGTGCTGATGAGGACGGAGGACAGATCCGAGGGGATGAAGTCGTCGTCGGCGGAGAGCTCGGCCACCGTCGCCGGAGTTAAAGAGTCGTCGGCGATGCAGAAGAAGCTGCAGAGGCTGAGCAGGAACGTGAGCGAGGCGATTGCCTCGCTCAAGAACTCGCTGAATCTTGACTCGGCCACTGACTCGCAAACGACGTCGTCTAAGATCGAGAGCTGTAGGAAGGTAGTGTGGGGAAGCGTGGTGAGGAACCTCACTCAGCTCTACCCCGGTAGTCAGTTACCGGAAAAGCTCGTCTCCAATCTTCGCAAGCATTATGATTCTCTTCCCCTCAGTTATGCTCAGGCGGGGTTTGAGATGAAAGAAGTGTTTCTTCATATAAAATTGATAGAGCAGGCAGCGGTGGACGACCACCCTGCAATGTTGATTCAAGAGGTGTCTGAACATGAAGGTCAGGGGTCTGTCTACAAGCTCACATTTGCTTGTAACTCTTTGGTTTCGCGGCCGGTGATGTCGGATGCGCTTGAAACCGCATCCATTTGCTGCAAAAAGATACAGATCTTTGAGAAGAAGGGTTGTACTCTTGGCATTGTTCTACTTATGGTTCAAGCTGGGCAGGAGAAGTCGTTCAGAAACCGGGTTGAAATTGCGTTGAAATCAGCTGTAAAGAAGCCCAAACTCAACACAGTAAAGCTCCCATTTGGGCTGTGTGGGTGTCAGGAAGAAAGTACCAAGGGGAGAGATATGGGAGAGATGGAGGAAGACATTGGTGAACAAAATTATAGAAATGGGATTGAGATTTCGAGTCAAAAGATTCAGCTTCCGACATCCCTACCCACTACGTCAGTCCTTGTGTCTGTAGATGAATGGCAGACAATCCAATCTGGTGGAGATGAGATAGGGAAGTGGCTGTTGAACGCTGATAGTCTTGACTTTGTCGATCAGATTGGACCCAATACGTTTAAGGGAGTTTACAAGGGCAAAAGGGTTGGAATTGAGAAGCTAAAAGGGTGTGACAAGGGGAACTCTTATGACTTTGAGCTCCGAAGAGATCTCTTGGAGCTCATGACCTTTGGGAACAAGAACATTCTGCAATTTTATGGTGTTTGCATTGATGAGAATCATGGGTTGTGCGTTGTGACAAAGTTGATGGAAGGTGGATCCGTATATGACTTGATGCTTAAAAGCAAGAAGATTCAGTCTAAGGATGTAATAAGGATTGCCGTTGATGTTGCAGAGGGGATCAAGTTCATGAATGATCATGGCGTTGCATATAGAGACCTCAACACACAGCGTATCTTGTTAGATCGAAATGGGAATGCTTGCTTAGGTGACATGGGTATAGTCTCTGCTTGCAAAGGTGTTGGTGAGGCAACGGAGTATGAAACTGATGGATACCGGTGGCTAGCTCCTGAGATCATTGCTGGTGATCCAGAAAGTGTTAGTGAGACATGGATGAGTAATGTATATAGTTTCGGGATGGTGATTTGGGAGATGGTGACTGGTGAGGCAGCCTACTCCGCATGTTCACCGGTCCAAGCAGCAGTTGGGATAGCTGCCTGTGGCCTCAGACCTGAGATTCCAAAGGACTGTCCACAAATGCTGAGATCCTTGATGACCAAGTGCTGGAACAACTCCCCCTCAAAGCGTCCTCAGTTCTCTGAAATTCTATCACTATTGCTGCGGACCAACAACAATGTAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

589

Amino Acids

64.96

Weight (kDa)

5.69

Isoelectric Point (pI)

48.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7377 PF24093 135 - 244 3.9e-54 Domain of unknown function (DUF7377)
PK_Tyr_Ser-Thr PF07714 366 - 580 6.2e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 368 - 578 2.5e-26 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000259)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19990
fragaria_vesca FvH4_2g02810 FvH4_2g02820 FvH4_2g02880 FvH4_2g02890
malus_domestica MD05G1110100.v1.1 MD05G1110200.v1.1 MD05G1110300.v1.1 MD08G1133700.v1.1 MD10G1113400.v1.1 MD10G1113500.v1.1 MD10G1113900.v1.1
prunus_persica Prupe.7G159200_v2.0.a1 Prupe.8G104000_v2.0.a1 Prupe.8G104100_v2.0.a1 Prupe.8G104200_v2.0.a1 Prupe.8G104300_v2.0.a1 Prupe.8G153300_v2.0.a1 Prupe.8G153400_v2.0.a1 Prupe.8G153900_v2.0.a1 Prupe.8G154000_v2.0.a1 Prupe.8G154100_v2.0.a1 Prupe.8G154200_v2.0.a1 Prupe.8G154300_v2.0.a1 Prupe.8G154400_v2.0.a1 Prupe.8G154500_v2.0.a1 Prupe.8G154600_v2.0.a1 Prupe.8G154700_v2.0.a1 Prupe.8G154800_v2.0.a1 Prupe.8G154900_v2.0.a1 Prupe.8G155000_v2.0.a1 Prupe.8G246500_v2.0.a1 Prupe.8G246800_v2.0.a1
pyrus_communis pycom05g10570 pycom05g10600
rosa_chinensis RchiOBHm_Chr6g0245241 RchiOBHm_Chr6g0245641 RchiOBHm_Chr6g0247401 RchiOBHm_Chr6g0247411 RchiOBHm_Chr6g0247441 RchiOBHm_Chr6g0247451 RchiOBHm_Chr6g0247481 RchiOBHm_Chr6g0247551 RchiOBHm_Chr6g0247591 RchiOBHm_Chr6g0247601 RchiOBHm_Chr6g0247611 RchiOBHm_Chr6g0247631
rosa_laevigata RLG00000010111 RLG00000015191 RLG00000015192 RLG00000015193 RLG00000015194 RLG00000015195 RLG00000015196 RLG00000015198 RLG00000015199 RLG00000015298 RLG00000015314
rosa_multiflora Rmu_sc0000147.1_g000053 Rmu_sc0000147.1_g000062 Rmu_sc0000147.1_g000081 Rmu_sc0000147.1_g000086 Rmu_sc0000147.1_g000087 Rmu_sc0000147.1_g000092 Rmu_sc0000147.1_g000099 Rmu_sc0000391.1_g000005 Rmu_sc0000391.1_g000011 Rmu_sc0000391.1_g000016 Rmu_sc0000391.1_g000027 Rmu_sc0001288.1_g000008 Rmu_sc0001341.1_g000002 Rmu_sc0003092.1_g000038 Rmu_sc0003092.1_g000050 Rmu_sc0003092.1_g000053 Rmu_sc0012746.1_g000003 Rmu_sc0016035.1_g000006 Rmu_sc0041002.1_g000001
rosa_roxburghii Rroxscaffold_180G00433420 Rroxscaffold_180G00433430 Rroxscaffold_180G00433450 Rroxscaffold_180G00433460 Rroxscaffold_180G00433480 Rroxscaffold_7G00213880 Rroxscaffold_7G00213890 Rroxscaffold_7G00213910 Rroxscaffold_7G00213920 Rroxscaffold_7G00213930 Rroxscaffold_7G00213940 Rroxscaffold_7G00213990 Rroxscaffold_7G00215210 Rroxscaffold_7G00215340
rosa_rugosa Rorug05G0513000 Rorug05G0515200 Rorug05G0526100 Rorug05G0526200 Rorug05G0526300 Rorug05G0526400 Rorug05G0526600 Rorug05G0526700.1 Rorug05G0526900 Rorug05G0527100 Rorug05G0527300
rosa_samantha Rh1DG283900 Rh6BG024300 Rh6BG027300 Rh6BG035500 Rh6BG035600 Rh6BG035800 Rh6BG036100 Rh6BG036200 Rh6BG036400 Rh6BG036600 Rh6BG036900 Rh6CG026600 Rh6CG035200 Rh6CG035500 Rh6CG035600 Rh6CG035700 Rh6CG035800 Rh6CG035900 Rh6CG036000 Rh6CG036100
rosa_wichuraiana Rw6G002370 Rw6G002560 Rw6G003490 Rw6G003500 Rw6G003510 Rw6G003530 Rw6G003550 Rw6G003560 Rw6G003580 Rw6G003600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 263
AccB7I CCANNNNNTGG 1 cut(s) 1689
AccI GTMKAC 1 cut(s) 528
AccII CGCG 1 cut(s) 565
AciI CCGC 8 cut(s) 5, 116, 410, 464, 565, 594, 1584, 1747
AclWI GGATC 6 cut(s) 84, 1218, 1231, 1313, 1487, 1665
AcoI YGGCCR 3 cut(s) 126, 240, 566
AcsI RAATTY 1 cut(s) 1728
AcyI GRCGYC 1 cut(s) 260
AfaI GTAC 3 cut(s) 40, 643, 793
AfiI CCNNNNNNNGG 1 cut(s) 1689
AgeI ACCGGT 2 cut(s) 1461, 1594
AgsI TTSAA 6 cut(s) 494, 590, 671, 707, 718, 979
AloI GAACNNNNNNTCC 2 cut(s) 674, 706
Alw21I GWGCWC 3 cut(s) 125, 1107, 1128
Alw26I GTCTC 4 cut(s) 364, 1335, 1414, 1505
AlwI GGATC 6 cut(s) 84, 1218, 1231, 1313, 1487, 1665
AlwNI CAGNNNCTG 1 cut(s) 181
AoxI GGCC 5 cut(s) 63, 126, 240, 566, 1627
ApeKI GCWGC 8 cut(s) 8, 172, 461, 606, 1574, 1604, 1619, 1744
ApoI RAATTY 1 cut(s) 1728
AsiGI ACCGGT 2 cut(s) 1461, 1594
Asp700I GAANNNNTTC 2 cut(s) 432, 689
AspLEI GCGC 1 cut(s) 586
AspS9I GGNCC 3 cut(s) 1013, 1597, 1749
AsuC2I CCSGG 3 cut(s) 32, 333, 701
AsuNHI GCTAGC 1 cut(s) 1468
AvaII GGWCC 3 cut(s) 1013, 1597, 1749
BamHI GGATCC 1 cut(s) 1223
BanII GRGCYC 3 cut(s) 125, 1107, 1128
BbsI GAAGAC 1 cut(s) 831
Bbv12I GWGCWC 3 cut(s) 125, 1107, 1128
BbvI GCAGC 8 cut(s) 20, 159, 473, 593, 1586, 1606, 1616, 1731
BccI CCATC 5 cut(s) 811, 1207, 1448, 1537, 1552
BceAI ACGGC 2 cut(s) 50, 1271
BcgI CGANNNNNNTGC 4 cut(s) 188, 222, 461, 495
BciVI GTATCC 1 cut(s) 1451
BclI TGATCA 1 cut(s) 1321
BcnI CCSGG 3 cut(s) 32, 333, 701
BcoDI GTCTC 4 cut(s) 364, 1335, 1414, 1505
BfaI CTAG 1 cut(s) 1469
BfmI CTRYAG 3 cut(s) 173, 280, 921
BfuI GTATCC 1 cut(s) 1451
BglII AGATCT 2 cut(s) 621, 1114
BlpI GCTNAGC 1 cut(s) 182
Bme1390I CCNGG 3 cut(s) 32, 333, 701
Bme18I GGWCC 3 cut(s) 1013, 1597, 1749
BmgT120I GGNCC 3 cut(s) 1013, 1597, 1749
BmiI GGNNCC 3 cut(s) 314, 1015, 1225
BmrFI CCNGG 3 cut(s) 32, 333, 701
BmsI GCATC 4 cut(s) 150, 571, 605, 1230
BmtI GCTAGC 1 cut(s) 1472
BpiI GAAGAC 1 cut(s) 831
Bpu10I CCTNAGC 2 cut(s) 405, 1390
Bpu1102I GCTNAGC 1 cut(s) 182
BpuEI CTTGAG 1 cut(s) 200
BpuMI CCSGG 3 cut(s) 32, 333, 701
BsaBI GATNNNNATC 2 cut(s) 620, 1182
BsaHI GRCGYC 1 cut(s) 260
BsaI GGTCTC 1 cut(s) 1335
BsaJI CCNNGG 3 cut(s) 93, 331, 795
BsaWI WCCGGW 3 cut(s) 346, 1461, 1594
BsaXI ACNNNNNCTCC 4 cut(s) 8, 38, 674, 704
Bsc4I CCNNNNNNNGG 1 cut(s) 1689
Bse118I RCCGGY 3 cut(s) 568, 1461, 1594
Bse1I ACTGG 1 cut(s) 1570
Bse3DI GCAATG 2 cut(s) 489, 1482
Bse8I GATNNNNATC 2 cut(s) 620, 1182
BseDI CCNNGG 3 cut(s) 93, 331, 795
BseGI GGATG 7 cut(s) 105, 586, 596, 890, 1276, 1524, 1548
BseJI GATNNNNATC 2 cut(s) 620, 1182
BseLI CCNNNNNNNGG 1 cut(s) 1689
BseMI GCAATG 2 cut(s) 489, 1482
BseMII CTCAG 9 cut(s) 173, 335, 409, 419, 1467, 1629, 1645, 1658, 1730
BseNI ACTGG 1 cut(s) 1570
BseX3I CGGCCG 1 cut(s) 566
BseXI GCAGC 8 cut(s) 20, 159, 473, 593, 1586, 1606, 1616, 1731
BseYI CCCAGC 1 cut(s) 674
Bsh1236I CGCG 1 cut(s) 565
Bsh1285I CGRYCG 1 cut(s) 569
BshFI GGCC 5 cut(s) 65, 128, 242, 568, 1629
BshTI ACCGGT 2 cut(s) 1461, 1594
BsiEI CGRYCG 1 cut(s) 569
BsiHKAI GWGCWC 3 cut(s) 125, 1107, 1128
BsiSI CCGG 8 cut(s) 31, 138, 333, 347, 569, 700, 1462, 1595
BslI CCNNNNNNNGG 1 cut(s) 1689
BsmAI GTCTC 4 cut(s) 364, 1335, 1414, 1505
BsmBI CGTCTC 1 cut(s) 364
BsmI GAATGC 1 cut(s) 1387
BsnI GGCC 5 cut(s) 65, 128, 242, 568, 1629
Bso31I GGTCTC 1 cut(s) 1335
Bsp1286I GDGCHC 3 cut(s) 125, 1107, 1128
Bsp1720I GCTNAGC 1 cut(s) 182
BspACI CCGC 8 cut(s) 5, 116, 410, 464, 565, 594, 1584, 1747
BspANI GGCC 5 cut(s) 65, 128, 242, 568, 1629
BspCNI CTCAG 9 cut(s) 174, 334, 408, 418, 1468, 1630, 1644, 1659, 1729
BspFNI CGCG 1 cut(s) 565
BspHI TCATGA 2 cut(s) 1128, 1314
BspLI GGNNCC 3 cut(s) 314, 1015, 1225
BspMAI CTGCAG 1 cut(s) 177
BspOI GCTAGC 1 cut(s) 1472
BspPI GGATC 6 cut(s) 84, 1218, 1231, 1313, 1487, 1665
BspTNI GGTCTC 1 cut(s) 1335
BsrDI GCAATG 2 cut(s) 489, 1482
BsrFI RCCGGY 3 cut(s) 568, 1461, 1594
BsrI ACTGG 1 cut(s) 1570
BssAI RCCGGY 3 cut(s) 568, 1461, 1594
BssECI CCNNGG 3 cut(s) 93, 331, 795
BssNI GRCGYC 1 cut(s) 260
BssT1I CCWWGG 1 cut(s) 795
Bst4CI ACNGT 3 cut(s) 133, 751, 1655
Bst6I CTCTTC 2 cut(s) 393, 1105
BstACI GRCGYC 1 cut(s) 260
BstAPI GCANNNNNTGC 1 cut(s) 67
BstC8I GCNNGC 6 cut(s) 63, 374, 459, 1387, 1417, 1470
BstF5I GGATG 7 cut(s) 105, 586, 596, 890, 1276, 1524, 1548
BstFNI CGCG 1 cut(s) 565
BstHHI GCGC 1 cut(s) 586
BstMAI GTCTC 4 cut(s) 364, 1335, 1414, 1505
BstMCI CGRYCG 1 cut(s) 569
BstMWI GCNNNNNNNGC 6 cut(s) 27, 67, 134, 169, 178, 1583
BstNSI RCATGY 1 cut(s) 1590
BstSCI CCNGG 3 cut(s) 30, 331, 699
BstSFI CTRYAG 3 cut(s) 173, 280, 921
BstUI CGCG 1 cut(s) 565
BstV1I GCAGC 8 cut(s) 20, 159, 473, 593, 1586, 1606, 1616, 1731
BstV2I GAAGAC 1 cut(s) 831
BstX2I RGATCY 5 cut(s) 89, 621, 1114, 1223, 1670
BstXI CCANNNNNNTGG 1 cut(s) 950
BstYI RGATCY 5 cut(s) 89, 621, 1114, 1223, 1670
BstZI CGGCCG 1 cut(s) 566
BsuI GTATCC 1 cut(s) 1451
BsuRI GGCC 5 cut(s) 65, 128, 242, 568, 1629
BtgZI GCGATG 1 cut(s) 173
BtsCI GGATG 7 cut(s) 105, 586, 596, 890, 1276, 1524, 1548
BtsIMutI CAGTG 1 cut(s) 243
Cac8I GCNNGC 6 cut(s) 63, 374, 459, 1387, 1417, 1470
CaiI CAGNNNCTG 1 cut(s) 181
CciI TCATGA 2 cut(s) 1128, 1314
CfoI GCGC 1 cut(s) 586
Cfr10I RCCGGY 3 cut(s) 568, 1461, 1594
Cfr13I GGNCC 3 cut(s) 1013, 1597, 1749
CseI GACGC 1 cut(s) 1700
Csp6I GTAC 3 cut(s) 39, 642, 792
CspAI ACCGGT 2 cut(s) 1461, 1594
CviAII CATG 9 cut(s) 52, 509, 1129, 1187, 1315, 1325, 1399, 1515, 1587
CviQI GTAC 3 cut(s) 39, 642, 792
EaeI YGGCCR 3 cut(s) 126, 240, 566
EagI CGGCCG 1 cut(s) 566
Eam1104I CTCTTC 2 cut(s) 393, 1105
EarI CTCTTC 2 cut(s) 393, 1105
EciI GGCGGA 1 cut(s) 131
Ecl136II GAGCTC 3 cut(s) 123, 1105, 1126
EclXI CGGCCG 1 cut(s) 566
Eco130I CCWWGG 1 cut(s) 795
Eco24I GRGCYC 3 cut(s) 125, 1107, 1128
Eco31I GGTCTC 1 cut(s) 1335
Eco47I GGWCC 3 cut(s) 1013, 1597, 1749
Eco52I CGGCCG 1 cut(s) 566
Eco53kI GAGCTC 3 cut(s) 123, 1105, 1126
EcoICRI GAGCTC 3 cut(s) 123, 1105, 1126
EcoT14I CCWWGG 1 cut(s) 795
EcoT38I GRGCYC 3 cut(s) 125, 1107, 1128
ErhI CCWWGG 1 cut(s) 795
Esp3I CGTCTC 1 cut(s) 364
FaeI CATG 9 cut(s) 55, 512, 1132, 1190, 1318, 1328, 1402, 1518, 1590
FalI AAGNNNNNCTT 2 cut(s) 420, 452
FatI CATG 9 cut(s) 51, 508, 1128, 1186, 1314, 1324, 1398, 1514, 1586
FauI CCCGC 1 cut(s) 403
FbaI TGATCA 1 cut(s) 1321
FblI GTMKAC 1 cut(s) 528
FokI GGATG 7 cut(s) 112, 583, 593, 877, 1283, 1531, 1555
FriOI GRGCYC 3 cut(s) 125, 1107, 1128
FspBI CTAG 1 cut(s) 1469
GlaI GCGC 1 cut(s) 585
GsaI CCCAGC 1 cut(s) 678
HaeIII GGCC 5 cut(s) 65, 128, 242, 568, 1629
HapII CCGG 8 cut(s) 31, 138, 333, 347, 569, 700, 1462, 1595
HgaI GACGC 1 cut(s) 1700
HhaI GCGC 1 cut(s) 586
Hin1I GRCGYC 1 cut(s) 260
Hin1II CATG 9 cut(s) 55, 512, 1132, 1190, 1318, 1328, 1402, 1518, 1590
Hin6I GCGC 1 cut(s) 584
HinP1I GCGC 1 cut(s) 584
HpaII CCGG 8 cut(s) 31, 138, 333, 347, 569, 700, 1462, 1595
Hpy166II GTNNAC 6 cut(s) 469, 529, 836, 1036, 1592, 1658
Hpy188I TCNGA 9 cut(s) 94, 505, 580, 695, 888, 1008, 1109, 1634, 1726
Hpy8I GTNNAC 6 cut(s) 469, 529, 836, 1036, 1592, 1658
Hpy99I CGWCG 6 cut(s) 112, 115, 137, 157, 262, 265
HpyAV CCTTC 4 cut(s) 280, 506, 628, 1211
HpyCH4III ACNGT 3 cut(s) 133, 751, 1655
HpyCH4IV ACGT 4 cut(s) 192, 260, 905, 1022
HpyCH4V TGCA 9 cut(s) 163, 175, 482, 609, 1156, 1173, 1298, 1334, 1419
HpyF10VI GCNNNNNNNGC 6 cut(s) 27, 67, 134, 169, 178, 1583
HpySE526I ACGT 4 cut(s) 192, 260, 905, 1022
Hsp92I GRCGYC 1 cut(s) 260
Hsp92II CATG 9 cut(s) 55, 512, 1132, 1190, 1318, 1328, 1402, 1518, 1590
HspAI GCGC 1 cut(s) 584
Ksp22I TGATCA 1 cut(s) 1321
LmnI GCTCC 5 cut(s) 58, 762, 1110, 1123, 1477
Lsp1109I GCAGC 8 cut(s) 20, 159, 473, 593, 1586, 1606, 1616, 1731
LweI GCATC 4 cut(s) 150, 571, 605, 1230
MaeI CTAG 1 cut(s) 1469
MaeII ACGT 4 cut(s) 192, 260, 905, 1022
MaeIII GTNAC 6 cut(s) 342, 548, 1076, 1201, 1394, 1561
MboII GAAGA 9 cut(s) 178, 359, 380, 428, 643, 797, 836, 1122, 1267
MflI RGATCY 5 cut(s) 89, 621, 1114, 1223, 1670
MhlI GDGCHC 3 cut(s) 125, 1107, 1128
MluCI AATT 6 cut(s) 446, 708, 841, 1056, 1157, 1728
MlyI GAGTC 4 cut(s) 158, 230, 242, 877
MmeI TCCRAC 3 cut(s) 558, 911, 1033
MroXI GAANNNNTTC 2 cut(s) 432, 689
MseI TTAA 3 cut(s) 144, 1026, 1245
MspA1I CMGCKG 2 cut(s) 464, 725
MspI CCGG 8 cut(s) 31, 138, 333, 347, 569, 700, 1462, 1595
MspR9I CCNGG 3 cut(s) 32, 333, 701
Mva1269I GAATGC 1 cut(s) 1387
MvnI CGCG 1 cut(s) 565
MwoI GCNNNNNNNGC 6 cut(s) 27, 67, 134, 169, 178, 1583
NciI CCSGG 3 cut(s) 32, 333, 701
NheI GCTAGC 1 cut(s) 1468
NlaIII CATG 9 cut(s) 55, 512, 1132, 1190, 1318, 1328, 1402, 1518, 1590
NlaIV GGNNCC 3 cut(s) 314, 1015, 1225
NmeAIII GCCGAG 2 cut(s) 104, 218
NmuCI GTSAC 4 cut(s) 1076, 1201, 1394, 1561
NspI RCATGY 1 cut(s) 1590
PagI TCATGA 2 cut(s) 1128, 1314
PcsI WCGNNNNNNNCGW 2 cut(s) 32, 257
PctI GAATGC 1 cut(s) 1387
PdmI GAANNNNTTC 2 cut(s) 432, 689
PfeI GAWTC 7 cut(s) 229, 383, 490, 877, 1183, 1258, 1642
PflFI GACNNNGTC 2 cut(s) 262, 998
PflMI CCANNNNNTGG 1 cut(s) 1689
PinAI ACCGGT 2 cut(s) 1461, 1594
PleI GAGTC 4 cut(s) 157, 230, 242, 876
PpsI GAGTC 4 cut(s) 157, 230, 242, 876
Psp124BI GAGCTC 3 cut(s) 125, 1107, 1128
PspFI CCCAGC 1 cut(s) 674
PspN4I GGNNCC 3 cut(s) 314, 1015, 1225
PspPI GGNCC 3 cut(s) 1013, 1597, 1749
PstI CTGCAG 1 cut(s) 177
PstNI CAGNNNCTG 1 cut(s) 181
PsuI RGATCY 5 cut(s) 89, 621, 1114, 1223, 1670
PsyI GACNNNGTC 2 cut(s) 262, 998
PvuII CAGCTG 1 cut(s) 725
RsaI GTAC 3 cut(s) 40, 643, 793
RsaNI GTAC 3 cut(s) 39, 642, 792
SacI GAGCTC 3 cut(s) 125, 1107, 1128
SaqAI TTAA 3 cut(s) 144, 1026, 1245
Sau96I GGNCC 3 cut(s) 1013, 1597, 1749
SchI GAGTC 4 cut(s) 158, 230, 242, 877
ScrFI CCNGG 3 cut(s) 32, 333, 701
SduI GDGCHC 3 cut(s) 125, 1107, 1128
SfaNI GCATC 4 cut(s) 150, 571, 605, 1230
SfcI CTRYAG 3 cut(s) 173, 280, 921
SinI GGWCC 3 cut(s) 1013, 1597, 1749
SmlI CTYRAG 1 cut(s) 215
SmoI CTYRAG 1 cut(s) 215
Sse9I AATT 6 cut(s) 446, 708, 841, 1056, 1157, 1728
SsiI CCGC 8 cut(s) 5, 116, 410, 464, 565, 594, 1584, 1747
SspMI CTAG 1 cut(s) 1469
SstI GAGCTC 3 cut(s) 125, 1107, 1128
StyD4I CCNGG 3 cut(s) 30, 331, 699
StyI CCWWGG 1 cut(s) 795
TaaI ACNGT 3 cut(s) 133, 751, 1655
TaiI ACGT 4 cut(s) 195, 263, 908, 1025
TaqI TCGA 5 cut(s) 26, 273, 866, 1002, 1372
TasI AATT 6 cut(s) 446, 708, 841, 1056, 1157, 1728
TatI WGTACW 1 cut(s) 641
TauI GCSGC 2 cut(s) 8, 568
TfiI GAWTC 7 cut(s) 229, 383, 490, 877, 1183, 1258, 1642
Tru1I TTAA 3 cut(s) 144, 1026, 1245
Tru9I TTAA 3 cut(s) 144, 1026, 1245
TscAI CASTG 1 cut(s) 250
TseFI GTSAC 4 cut(s) 1076, 1201, 1394, 1561
TseI GCWGC 8 cut(s) 8, 172, 461, 606, 1574, 1604, 1619, 1744
Tsp45I GTSAC 4 cut(s) 1076, 1201, 1394, 1561
TspDTI ATGAA 8 cut(s) 116, 428, 437, 525, 942, 1303, 1331, 1461
TspGWI ACGGA 4 cut(s) 56, 95, 1216, 1454
TspRI CASTG 1 cut(s) 250
Tth111I GACNNNGTC 2 cut(s) 262, 998
Van91I CCANNNNNTGG 1 cut(s) 1689
VpaK11BI GGWCC 3 cut(s) 1013, 1597, 1749
XapI RAATTY 1 cut(s) 1728
XceI RCATGY 1 cut(s) 1590
XcmI CCANNNNNNNNNTGG 1 cut(s) 1607
XmiI GTMKAC 1 cut(s) 528
XmnI GAANNNNTTC 2 cut(s) 432, 689
XspI CTAG 1 cut(s) 1469
ZraI GACGTC 1 cut(s) 261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.