Basic form of pathogenesis-related protein 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Sod_Fe_C | PF02777 | 5 - 59 | 8.8e-18 | Iron/manganese superoxide dismutases, C-terminal domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 166 |
| AclWI | GGATC | 2 cut(s) | 95, 108 |
| AcsI | RAATTY | 1 cut(s) | 181 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 140, 215 |
| AgsI | TTSAA | 1 cut(s) | 83 |
| AluBI | AGCT | 2 cut(s) | 73, 92 |
| AluI | AGCT | 2 cut(s) | 73, 92 |
| Alw26I | GTCTC | 1 cut(s) | 252 |
| AlwI | GGATC | 2 cut(s) | 95, 108 |
| Ama87I | CYCGRG | 1 cut(s) | 140 |
| ApeKI | GCWGC | 1 cut(s) | 17 |
| ApoI | RAATTY | 1 cut(s) | 181 |
| AvaI | CYCGRG | 1 cut(s) | 140 |
| BamHI | GGATCC | 1 cut(s) | 100 |
| BbvI | GCAGC | 1 cut(s) | 4 |
| BcoDI | GTCTC | 1 cut(s) | 252 |
| BfaI | CTAG | 1 cut(s) | 53 |
| BfuAI | ACCTGC | 1 cut(s) | 166 |
| BglII | AGATCT | 1 cut(s) | 271 |
| BisI | GCNGC | 1 cut(s) | 18 |
| BlsI | GCNGC | 1 cut(s) | 19 |
| BmeT110I | CYCGRG | 1 cut(s) | 140 |
| BmiI | GGNNCC | 1 cut(s) | 102 |
| BmsI | GCATC | 1 cut(s) | 288 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 140, 215 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 140, 215 |
| BseXI | GCAGC | 1 cut(s) | 4 |
| BsiHKCI | CYCGRG | 1 cut(s) | 140 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 140, 215 |
| BsmAI | GTCTC | 1 cut(s) | 252 |
| BsmBI | CGTCTC | 1 cut(s) | 252 |
| BsmI | GAATGC | 1 cut(s) | 89 |
| BsoBI | CYCGRG | 1 cut(s) | 140 |
| Bsp143I | GATC | 4 cut(s) | 61, 100, 262, 271 |
| BspLI | GGNNCC | 1 cut(s) | 102 |
| BspMI | ACCTGC | 1 cut(s) | 166 |
| BspPI | GGATC | 2 cut(s) | 95, 108 |
| BssMI | GATC | 4 cut(s) | 61, 100, 262, 271 |
| BstC8I | GCNNGC | 2 cut(s) | 48, 162 |
| BstKTI | GATC | 4 cut(s) | 64, 103, 265, 274 |
| BstMAI | GTCTC | 1 cut(s) | 252 |
| BstMBI | GATC | 4 cut(s) | 61, 100, 262, 271 |
| BstNSI | RCATGY | 1 cut(s) | 164 |
| BstV1I | GCAGC | 1 cut(s) | 4 |
| BstX2I | RGATCY | 2 cut(s) | 100, 271 |
| BstYI | RGATCY | 2 cut(s) | 100, 271 |
| BtsIMutI | CAGTG | 1 cut(s) | 104 |
| BveI | ACCTGC | 1 cut(s) | 166 |
| Cac8I | GCNNGC | 2 cut(s) | 48, 162 |
| CviAII | CATG | 1 cut(s) | 161 |
| CviJI | RGCY | 3 cut(s) | 46, 73, 92 |
| CviKI_1 | RGCY | 3 cut(s) | 46, 73, 92 |
| DpnI | GATC | 4 cut(s) | 63, 102, 264, 273 |
| DpnII | GATC | 4 cut(s) | 61, 100, 262, 271 |
| Eco88I | CYCGRG | 1 cut(s) | 140 |
| Esp3I | CGTCTC | 1 cut(s) | 252 |
| FaeI | CATG | 1 cut(s) | 164 |
| FaiI | YATR | 3 cut(s) | 129, 162, 206 |
| FatI | CATG | 1 cut(s) | 160 |
| Fnu4HI | GCNGC | 1 cut(s) | 18 |
| Fsp4HI | GCNGC | 1 cut(s) | 18 |
| FspBI | CTAG | 1 cut(s) | 53 |
| GluI | GCNGC | 1 cut(s) | 18 |
| Hin1II | CATG | 1 cut(s) | 164 |
| HindIII | AAGCTT | 1 cut(s) | 71 |
| Hpy188I | TCNGA | 1 cut(s) | 66 |
| Hpy188III | TCNNGA | 3 cut(s) | 53, 98, 142 |
| HpyAV | CCTTC | 1 cut(s) | 5 |
| HpyCH4V | TGCA | 3 cut(s) | 25, 87, 175 |
| Hsp92II | CATG | 1 cut(s) | 164 |
| Kzo9I | GATC | 4 cut(s) | 61, 100, 262, 271 |
| LmnI | GCTCC | 3 cut(s) | 119, 157, 289 |
| LpnPI | CCDG | 3 cut(s) | 18, 83, 161 |
| Lsp1109I | GCAGC | 1 cut(s) | 4 |
| LweI | GCATC | 1 cut(s) | 288 |
| MaeI | CTAG | 1 cut(s) | 53 |
| MalI | GATC | 4 cut(s) | 63, 102, 264, 273 |
| MboI | GATC | 4 cut(s) | 61, 100, 262, 271 |
| MboII | GAAGA | 2 cut(s) | 79, 266 |
| MflI | RGATCY | 2 cut(s) | 100, 271 |
| MluCI | AATT | 3 cut(s) | 111, 124, 181 |
| MnlI | CCTC | 1 cut(s) | 144 |
| MseI | TTAA | 3 cut(s) | 114, 251, 313 |
| Mva1269I | GAATGC | 1 cut(s) | 89 |
| NdeII | GATC | 4 cut(s) | 61, 100, 262, 271 |
| NlaIII | CATG | 1 cut(s) | 164 |
| NlaIV | GGNNCC | 1 cut(s) | 102 |
| NspI | RCATGY | 1 cut(s) | 164 |
| PaeI | GCATGC | 1 cut(s) | 164 |
| PctI | GAATGC | 1 cut(s) | 89 |
| PkrI | GCNGC | 1 cut(s) | 19 |
| PspN4I | GGNNCC | 1 cut(s) | 102 |
| PsuI | RGATCY | 2 cut(s) | 100, 271 |
| SaqAI | TTAA | 3 cut(s) | 114, 251, 313 |
| SatI | GCNGC | 1 cut(s) | 18 |
| Sau3AI | GATC | 4 cut(s) | 61, 100, 262, 271 |
| SetI | ASST | 6 cut(s) | 16, 31, 75, 94, 180, 220 |
| SfaNI | GCATC | 1 cut(s) | 288 |
| SphI | GCATGC | 1 cut(s) | 164 |
| Sse9I | AATT | 3 cut(s) | 111, 124, 181 |
| SspMI | CTAG | 1 cut(s) | 53 |
| TasI | AATT | 3 cut(s) | 111, 124, 181 |
| Tru1I | TTAA | 3 cut(s) | 114, 251, 313 |
| Tru9I | TTAA | 3 cut(s) | 114, 251, 313 |
| TscAI | CASTG | 1 cut(s) | 111 |
| TseI | GCWGC | 1 cut(s) | 17 |
| TspDTI | ATGAA | 1 cut(s) | 249 |
| TspRI | CASTG | 1 cut(s) | 111 |
| XapI | RAATTY | 1 cut(s) | 181 |
| XbaI | TCTAGA | 1 cut(s) | 52 |
| XceI | RCATGY | 1 cut(s) | 164 |
| XspI | CTAG | 1 cut(s) | 53 |