Rorug06G0088900

Citrate-binding protein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000532
Physical Location & Seq
Forward (+)
11840845 .. 11843502
2658 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0088900.1

Sequence Viewer

Length: 1563 bp
ATGGCAGGGGGTACGTTTAACATTGAGGGTGGGGGTAAAAATTATGAAGGAAGGATGATCACTCTCTTTGTGATCTTCACCTGTGTAGTGGCAGCCTCCGGCGGTCTCCTCTTCGGATATGATATCGGAATCTCAGGAGGAGTGACTTCCATGGACCCATTCTTAAGCAAGTTCTTCCCATCCGTCGAGAAGAAGATGAAGAATTCCGGTGATGATGGAAACATGTATTGCAAATTCGAAAGCCAGATCCTTACATTGTTCACCTCTTCACTCTACATTGCAGCGTTGGTAGCTTCCTTCTTTGCTTCAGTTGTAACCAGGAAATATGGTCGGAAAATCTCCATGTTTTTTGCAGGCTGTGTTTTCCTTCTAGGTGCTATCTTAAATGGTGTTGCCAATAGCATTGTGCTTCTAATCCTCGGTCGTTTGTCTCTTGGTGTAGGTGTTGGATTCGCTAATCAGGCTGTCCCTGTTTATTTATCGGAGATGGCTCCAGCAAAGTTTAGAGGAGCACTTAACATTGGCTTCACAATAGCTTGCACCATTGGTATTCTAGTGGCCAATCTTGTTAACTATGGCACATCAAAGATAAAGAGTGGACAAGGGTGGAGAGTTTCTCTAGCTCTTGCAGGCGTCCCGGCATTAATGATGATTATAGGCTCACTCTTTTTACCCGATACTCCAAATTCCATTCTAGCGAGAGGTCACCCAAAGGAGGCCAAGAAAGTGTTACAAAAAGTTCGTGGCACTGAAAATGTCGACGAAGAGTTCCAAGACCTTATTCAAGCAAGTGAGGCTGCAAAGAAAGTGGAGCACCCATGGACAAACATCACTCAACCGAGATATAGGCCTCAGCTTGTTATTTGCTGTCTCATTCCATTATTCCAACAGCTTACCGGCATCAATGTGATCATGTTCTATGCACCAGTTCTTTTCAAAACTTTGGGTATGGGAGATGATGCTTCCCTCATCTCTGCAGTCATCACCGGTTCTGTTAATGTCGTATCTACCATCGTGTCAATTGTCACAGTCGATAGGCTTGGAAGAAGGGTGTTGTTCCTTGAAGGCGGAGTGCAAATGGTCGTGTGCCAGATTGCAGTTGCAATCCTGGTATGGATGGAGTTCAGTGTGAGCGGAGTAGGATCACTGACAAAAGGCGAAGCTAATTTCCTCGTGTTCTTGATTTGTATGTATGTTGCGGGCTTTGCATGGTCTTGGGATCCGTTGGGGTGGTTGGTGCCTAGTGAGATTTGTCCTTTAGAGATCCGATCTGCTGGGCAAGCCATCAATGTGTCGATTAACATGTTATTCACTTTTGTCATTGGGCAAGCTTTCCTAACCATGCTTTGCTCTATGAAGTTTGGGTTGTTCTTCTTCTTTGCTGGCTTTGTAATTATTATGACCATATTTGTCGCCTTCTTCATACCCGAAACAAAGAATGTCCCCATCGAAGAGATTAACACGGTGTGGAAAGCACACTGGTTTTGGGGCAAGTACATCCCAGATGATGCTATCATTGATGGTACACACAACAAAGGCAAAGTTGATTTACAGGAGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Alginate_lyase2

Protein Analysis

520

Amino Acids

56.57

Weight (kDa)

8.43

Isoelectric Point (pI)

30.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 28 - 490 7.5e-128 Sugar (and other) transporter
MFS_1 PF07690 85 - 436 2.8e-24 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000532)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23820 FvH4_1g23821 FvH4_1g23860 FvH4_1g23860 FvH4_2g13510 FvH4_2g13513 FvH4_2g13520 FvH4_2g13550
malus_domestica MD05G1029900.v1.1 MD07G1183700.v1.1 MD10G1027700.v1.1 MD10G1027900.v1.1 MD10G1028300.v1.1 MD10G1030500.v1.1 MD10G1031000.v1.1 MD10G1031300.v1.1 MD15G1341000.v1.1
prunus_persica Prupe.6G161900_v2.0.a1 Prupe.6G161900_v2.0.a1 Prupe.6G161900_v2.0.a1 Prupe.8G032800_v2.0.a1 Prupe.8G032900_v2.0.a1 Prupe.8G033100_v2.0.a1
pyrus_communis pycom01g03170
rosa_chinensis RchiOBHm_Chr2g0119701 RchiOBHm_Chr2g0119711 RchiOBHm_Chr2g0119741 RchiOBHm_Chr2g0119771 RchiOBHm_Chr2g0119811 RchiOBHm_Chr6g0275141 RchiOBHm_Chr6g0275151 RchiOBHm_Chr6g0275161
rosa_laevigata RLG00000013491 RLG00000013494 RLG00000018485 RLG00000018486 RLG00000018489 RLG00000018492
rosa_multiflora Rmu_sc0001501.1_g000054 Rmu_sc0001501.1_g000061 Rmu_sc0001501.1_g000088 Rmu_sc0006012.1_g000002 Rmu_sc0020284.1_g000003 Rmu_sc0033232.1_g000001 Rmu_sc0033428.1_g000001 Rmu_ssc0000041.1_g000008 Rmu_ssc0000041.1_g000015
rosa_roxburghii Rroxscaffold_2G00081650 Rroxscaffold_2G00124090 Rroxscaffold_2G00124110 Rroxscaffold_7G00193590 Rroxscaffold_7G00193610
rosa_rugosa Rorug02G0223300 Rorug02G0223500 Rorug06G0088700 Rorug06G0088800 Rorug06G0088900 Rorug06G0089000 Rorug06G0089100
rosa_samantha Rh2AG280400 Rh2AG280700 Rh2AG280800 Rh2BG292200 Rh2BG292500 Rh2BG292800 Rh2DG287400 Rh2DG287600 Rh2DG306100 Rh2DG306500 Rh2DG306700 Rh6AG202700 Rh6AG202900 Rh6AG203100 Rh6BG205900 Rh6CG208000 Rh6CG208100 Rh6CG208300 Rh6DG198300 Rh6DG198400
rosa_wichuraiana Rw0G003770 Rw2G022460 Rw2G022490 Rw6G017600 Rw6G017610 Rw6G017620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1237
AccBSI CCGCTC 1 cut(s) 1134
AccI GTMKAC 1 cut(s) 759
AciI CCGC 4 cut(s) 102, 1068, 1134, 1199
AclWI GGATC 5 cut(s) 241, 1150, 1214, 1227, 1258
AcoI YGGCCR 1 cut(s) 558
AcsI RAATTY 3 cut(s) 202, 233, 685
AcuI CTGAAG 1 cut(s) 291
AcyI GRCGYC 1 cut(s) 633
AdeI CACNNNGTG 1 cut(s) 1467
AfaI GTAC 3 cut(s) 13, 1496, 1525
AfiI CCNNNNNNNGG 1 cut(s) 715
AflII CTTAAG 1 cut(s) 163
AflIII ACRYGT 2 cut(s) 222, 1302
AgeI ACCGGT 1 cut(s) 986
AgsI TTSAA 3 cut(s) 785, 937, 1064
AjnI CCWGG 2 cut(s) 317, 1107
AjuI GAANNNNNNNTTGG 2 cut(s) 765, 797
AluBI AGCT 7 cut(s) 293, 536, 623, 856, 892, 1163, 1331
AluI AGCT 7 cut(s) 293, 536, 623, 856, 892, 1163, 1331
Alw21I GWGCWC 2 cut(s) 514, 816
Alw26I GTCTC 3 cut(s) 110, 435, 875
AlwI GGATC 5 cut(s) 241, 1150, 1214, 1227, 1258
AoxI GGCC 3 cut(s) 558, 717, 848
ApeKI GCWGC 3 cut(s) 92, 281, 797
ApoI RAATTY 3 cut(s) 202, 233, 685
AseI ATTAAT 1 cut(s) 644
AsiGI ACCGGT 1 cut(s) 986
AspS9I GGNCC 1 cut(s) 154
AsuC2I CCSGG 1 cut(s) 638
AsuHPI GGTGA 5 cut(s) 70, 221, 253, 698, 976
AsuII TTCGAA 1 cut(s) 237
AvaII GGWCC 1 cut(s) 154
BalI TGGCCA 1 cut(s) 560
BamHI GGATCC 1 cut(s) 1219
BanI GGYRCC 1 cut(s) 1237
BauI CACGAG 1 cut(s) 1172
Bbv12I GWGCWC 2 cut(s) 514, 816
BbvCI CCTCAGC 1 cut(s) 852
BbvI GCAGC 3 cut(s) 104, 293, 784
BccI CCATC 8 cut(s) 187, 209, 481, 1019, 1111, 1292, 1454, 1514
BciT130I CCWGG 2 cut(s) 319, 1109
BclI TGATCA 2 cut(s) 57, 909
BcnI CCSGG 1 cut(s) 638
BcoDI GTCTC 3 cut(s) 110, 435, 875
BfaI CTAG 5 cut(s) 371, 554, 620, 695, 1242
BfmI CTRYAG 1 cut(s) 975
BfrI CTTAAG 1 cut(s) 163
BisI GCNGC 3 cut(s) 93, 282, 798
BlsI GCNGC 3 cut(s) 94, 283, 799
Bme1390I CCNGG 3 cut(s) 319, 638, 1109
Bme18I GGWCC 1 cut(s) 154
BmgT120I GGNCC 1 cut(s) 154
BmiI GGNNCC 4 cut(s) 156, 492, 1221, 1239
BmrFI CCNGG 3 cut(s) 319, 638, 1109
BmsI GCATC 3 cut(s) 909, 949, 1498
BplI GAGNNNNNCTC 2 cut(s) 601, 633
BpmI CTGGAG 1 cut(s) 477
Bpu10I CCTNAGC 1 cut(s) 852
Bpu14I TTCGAA 1 cut(s) 237
BpuMI CCSGG 1 cut(s) 638
BsaHI GRCGYC 1 cut(s) 633
BsaI GGTCTC 1 cut(s) 110
BsaJI CCNNGG 3 cut(s) 150, 418, 818
BsaWI WCCGGW 2 cut(s) 206, 986
Bsc4I CCNNNNNNNGG 1 cut(s) 715
Bse118I RCCGGY 2 cut(s) 896, 986
Bse1I ACTGG 2 cut(s) 926, 1484
Bse3DI GCAATG 1 cut(s) 276
BseBI CCWGG 2 cut(s) 319, 1109
BseDI CCNNGG 3 cut(s) 150, 418, 818
BseGI GGATG 4 cut(s) 60, 179, 1122, 1497
BseLI CCNNNNNNNGG 1 cut(s) 715
BseMI GCAATG 1 cut(s) 276
BseMII CTCAG 2 cut(s) 147, 866
BseNI ACTGG 2 cut(s) 926, 1484
BseRI GAGGAG 3 cut(s) 98, 153, 522
BseXI GCAGC 3 cut(s) 104, 293, 784
BseYI CCCAGC 1 cut(s) 1274
Bsh1285I CGRYCG 1 cut(s) 424
BshFI GGCC 3 cut(s) 560, 719, 850
BshNI GGYRCC 1 cut(s) 1237
BshTI ACCGGT 1 cut(s) 986
BsiEI CGRYCG 1 cut(s) 424
BsiHKAI GWGCWC 2 cut(s) 514, 816
BsiSI CCGG 5 cut(s) 99, 207, 638, 897, 987
BslFI GGGAC 3 cut(s) 452, 620, 1427
BslI CCNNNNNNNGG 1 cut(s) 715
BsmAI GTCTC 3 cut(s) 110, 435, 875
BsmFI GGGAC 3 cut(s) 452, 620, 1427
BsnI GGCC 3 cut(s) 560, 719, 850
Bso31I GGTCTC 1 cut(s) 110
Bsp119I TTCGAA 1 cut(s) 237
Bsp1286I GDGCHC 2 cut(s) 514, 816
Bsp143I GATC 8 cut(s) 57, 72, 246, 909, 1142, 1219, 1263, 1268
Bsp19I CCATGG 2 cut(s) 150, 818
BspACI CCGC 4 cut(s) 102, 1068, 1134, 1199
BspANI GGCC 3 cut(s) 560, 719, 850
BspCNI CTCAG 2 cut(s) 146, 865
BspLI GGNNCC 4 cut(s) 156, 492, 1221, 1239
BspMAI CTGCAG 1 cut(s) 979
BspPI GGATC 5 cut(s) 241, 1150, 1214, 1227, 1258
BspT104I TTCGAA 1 cut(s) 237
BspT107I GGYRCC 1 cut(s) 1237
BspTI CTTAAG 1 cut(s) 163
BspTNI GGTCTC 1 cut(s) 110
BsrBI CCGCTC 1 cut(s) 1134
BsrDI GCAATG 1 cut(s) 276
BsrFI RCCGGY 2 cut(s) 896, 986
BsrI ACTGG 2 cut(s) 926, 1484
BssAI RCCGGY 2 cut(s) 896, 986
BssECI CCNNGG 3 cut(s) 150, 418, 818
BssMI GATC 8 cut(s) 57, 72, 246, 909, 1142, 1219, 1263, 1268
BssNI GRCGYC 1 cut(s) 633
BssSI CACGAG 1 cut(s) 1172
BssT1I CCWWGG 2 cut(s) 150, 818
Bst2BI CACGAG 1 cut(s) 1172
Bst2UI CCWGG 2 cut(s) 319, 1109
Bst4CI ACNGT 2 cut(s) 1030, 1465
Bst6I CTCTTC 4 cut(s) 116, 271, 759, 1446
BstACI GRCGYC 1 cut(s) 633
BstAFI CTTAAG 1 cut(s) 163
BstBI TTCGAA 1 cut(s) 237
BstC8I GCNNGC 7 cut(s) 355, 538, 631, 1201, 1281, 1329, 1384
BstDEI CTNAG 2 cut(s) 133, 852
BstDSI CCRYGG 2 cut(s) 150, 818
BstEII GGTNACC 1 cut(s) 704
BstF5I GGATG 4 cut(s) 60, 179, 1122, 1497
BstKTI GATC 8 cut(s) 60, 75, 249, 912, 1145, 1222, 1266, 1271
BstMAI GTCTC 3 cut(s) 110, 435, 875
BstMBI GATC 8 cut(s) 57, 72, 246, 909, 1142, 1219, 1263, 1268
BstMCI CGRYCG 1 cut(s) 424
BstMWI GCNNNNNNNGC 5 cut(s) 290, 461, 794, 1205, 1280
BstNI CCWGG 2 cut(s) 319, 1109
BstNSI RCATGY 2 cut(s) 226, 1306
BstPI GGTNACC 1 cut(s) 704
BstSCI CCNGG 3 cut(s) 317, 636, 1107
BstSFI CTRYAG 1 cut(s) 975
BstV1I GCAGC 3 cut(s) 104, 293, 784
BstX2I RGATCY 3 cut(s) 246, 1219, 1263
BstYI RGATCY 3 cut(s) 246, 1219, 1263
BsuRI GGCC 3 cut(s) 560, 719, 850
BtgI CCRYGG 2 cut(s) 150, 818
BtsCI GGATG 4 cut(s) 60, 179, 1122, 1497
BtsIMutI CAGTG 4 cut(s) 747, 1132, 1145, 1477
Cac8I GCNNGC 7 cut(s) 355, 538, 631, 1201, 1281, 1329, 1384
Cfr10I RCCGGY 2 cut(s) 896, 986
Cfr13I GGNCC 1 cut(s) 154
CseI GACGC 1 cut(s) 622
Csp6I GTAC 3 cut(s) 12, 1495, 1524
CspAI ACCGGT 1 cut(s) 986
CspCI CAANNNNNGTGG 2 cut(s) 789, 824
CviAII CATG 8 cut(s) 151, 223, 343, 819, 913, 1209, 1303, 1342
CviQI GTAC 3 cut(s) 12, 1495, 1524
DdeI CTNAG 2 cut(s) 133, 852
DpnI GATC 8 cut(s) 59, 74, 248, 911, 1144, 1221, 1265, 1270
DpnII GATC 8 cut(s) 57, 72, 246, 909, 1142, 1219, 1263, 1268
DraIII CACNNNGTG 1 cut(s) 1467
EaeI YGGCCR 1 cut(s) 558
Eam1104I CTCTTC 4 cut(s) 116, 271, 759, 1446
EarI CTCTTC 4 cut(s) 116, 271, 759, 1446
EciI GGCGGA 1 cut(s) 1083
Eco130I CCWWGG 2 cut(s) 150, 818
Eco147I AGGCCT 1 cut(s) 850
Eco31I GGTCTC 1 cut(s) 110
Eco32I GATATC 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 154
Eco57I CTGAAG 1 cut(s) 291
Eco91I GGTNACC 1 cut(s) 704
EcoO65I GGTNACC 1 cut(s) 704
EcoRI GAATTC 1 cut(s) 202
EcoRII CCWGG 2 cut(s) 317, 1107
EcoRV GATATC 1 cut(s) 124
EcoT14I CCWWGG 2 cut(s) 150, 818
ErhI CCWWGG 2 cut(s) 150, 818
FaeI CATG 8 cut(s) 154, 226, 346, 822, 916, 1212, 1306, 1345
FaqI GGGAC 3 cut(s) 452, 620, 1427
FatI CATG 8 cut(s) 150, 222, 342, 818, 912, 1208, 1302, 1341
FauI CCCGC 1 cut(s) 1192
FbaI TGATCA 2 cut(s) 57, 909
FblI GTMKAC 1 cut(s) 759
Fnu4HI GCNGC 3 cut(s) 93, 282, 798
FokI GGATG 4 cut(s) 67, 166, 1129, 1484
Fsp4HI GCNGC 3 cut(s) 93, 282, 798
FspBI CTAG 5 cut(s) 371, 554, 620, 695, 1242
GluI GCNGC 3 cut(s) 93, 282, 798
GsaI CCCAGC 1 cut(s) 1278
GsuI CTGGAG 1 cut(s) 477
HaeIII GGCC 3 cut(s) 560, 719, 850
HapII CCGG 5 cut(s) 99, 207, 638, 897, 987
HgaI GACGC 1 cut(s) 622
Hin1I GRCGYC 1 cut(s) 633
Hin1II CATG 8 cut(s) 154, 226, 346, 822, 916, 1212, 1306, 1345
HincII GTYRAC 2 cut(s) 571, 760
HindII GTYRAC 2 cut(s) 571, 760
HindIII AAGCTT 1 cut(s) 1329
HinfI GANTC 2 cut(s) 129, 450
HpaI GTTAAC 1 cut(s) 571
HpaII CCGG 5 cut(s) 99, 207, 638, 897, 987
HphI GGTGA 5 cut(s) 70, 221, 253, 698, 976
Hpy166II GTNNAC 5 cut(s) 261, 571, 599, 760, 1526
Hpy188I TCNGA 5 cut(s) 116, 128, 333, 484, 1268
Hpy188III TCNNGA 3 cut(s) 135, 187, 1180
Hpy8I GTNNAC 5 cut(s) 261, 571, 599, 760, 1526
Hpy99I CGWCG 2 cut(s) 188, 764
HpyAV CCTTC 7 cut(s) 41, 45, 307, 377, 1041, 1058, 1426
HpyCH4III ACNGT 2 cut(s) 1030, 1465
HpyCH4IV ACGT 1 cut(s) 14
HpyF10VI GCNNNNNNNGC 5 cut(s) 290, 461, 794, 1205, 1280
HpyF3I CTNAG 2 cut(s) 133, 852
HpySE526I ACGT 1 cut(s) 14
Hsp92I GRCGYC 1 cut(s) 633
Hsp92II CATG 8 cut(s) 154, 226, 346, 822, 916, 1212, 1306, 1345
Ksp22I TGATCA 2 cut(s) 57, 909
KspAI GTTAAC 1 cut(s) 571
Kzo9I GATC 8 cut(s) 57, 72, 246, 909, 1142, 1219, 1263, 1268
LmnI GCTCC 3 cut(s) 496, 509, 811
Lsp1109I GCAGC 3 cut(s) 104, 293, 784
LweI GCATC 3 cut(s) 909, 949, 1498
MaeI CTAG 5 cut(s) 371, 554, 620, 695, 1242
MaeII ACGT 1 cut(s) 14
MaeIII GTNAC 5 cut(s) 142, 313, 704, 729, 1024
MalI GATC 8 cut(s) 59, 74, 248, 911, 1144, 1221, 1265, 1270
MbiI CCGCTC 1 cut(s) 1134
MboI GATC 8 cut(s) 57, 72, 246, 909, 1142, 1219, 1263, 1268
MfeI CAATTG 1 cut(s) 1020
MflI RGATCY 3 cut(s) 246, 1219, 1263
MhlI GDGCHC 2 cut(s) 514, 816
MlsI TGGCCA 1 cut(s) 560
MluCI AATT 7 cut(s) 40, 202, 233, 685, 1020, 1165, 1392
MluNI TGGCCA 1 cut(s) 560
MmeI TCCRAC 3 cut(s) 311, 427, 910
Mox20I TGGCCA 1 cut(s) 560
MscI TGGCCA 1 cut(s) 560
MseI TTAA 9 cut(s) 18, 164, 383, 516, 570, 644, 996, 1299, 1458
MslI CAYNNNNRTG 2 cut(s) 905, 1289
Msp20I TGGCCA 1 cut(s) 560
MspCI CTTAAG 1 cut(s) 163
MspI CCGG 5 cut(s) 99, 207, 638, 897, 987
MspR9I CCNGG 3 cut(s) 319, 638, 1109
MunI CAATTG 1 cut(s) 1020
MvaI CCWGG 2 cut(s) 319, 1109
MwoI GCNNNNNNNGC 5 cut(s) 290, 461, 794, 1205, 1280
NciI CCSGG 1 cut(s) 638
NcoI CCATGG 2 cut(s) 150, 818
NdeII GATC 8 cut(s) 57, 72, 246, 909, 1142, 1219, 1263, 1268
NlaIII CATG 8 cut(s) 154, 226, 346, 822, 916, 1212, 1306, 1345
NlaIV GGNNCC 4 cut(s) 156, 492, 1221, 1239
NmuCI GTSAC 3 cut(s) 142, 704, 1024
NspI RCATGY 2 cut(s) 226, 1306
NspV TTCGAA 1 cut(s) 237
PceI AGGCCT 1 cut(s) 850
PciI ACATGT 2 cut(s) 222, 1302
PfeI GAWTC 2 cut(s) 129, 450
PinAI ACCGGT 1 cut(s) 986
PkrI GCNGC 3 cut(s) 94, 283, 799
PscI ACATGT 2 cut(s) 222, 1302
PshBI ATTAAT 1 cut(s) 644
Psp6I CCWGG 2 cut(s) 317, 1107
PspEI GGTNACC 1 cut(s) 704
PspFI CCCAGC 1 cut(s) 1274
PspGI CCWGG 2 cut(s) 317, 1107
PspN4I GGNNCC 4 cut(s) 156, 492, 1221, 1239
PspPI GGNCC 1 cut(s) 154
PstI CTGCAG 1 cut(s) 979
PsuI RGATCY 3 cut(s) 246, 1219, 1263
RsaI GTAC 3 cut(s) 13, 1496, 1525
RsaNI GTAC 3 cut(s) 12, 1495, 1524
RseI CAYNNNNRTG 2 cut(s) 905, 1289
SalI GTCGAC 1 cut(s) 758
SaqAI TTAA 9 cut(s) 18, 164, 383, 516, 570, 644, 996, 1299, 1458
SatI GCNGC 3 cut(s) 93, 282, 798
Sau3AI GATC 8 cut(s) 57, 72, 246, 909, 1142, 1219, 1263, 1268
Sau96I GGNCC 1 cut(s) 154
ScrFI CCNGG 3 cut(s) 319, 638, 1109
SduI GDGCHC 2 cut(s) 514, 816
SfaNI GCATC 3 cut(s) 909, 949, 1498
SfcI CTRYAG 1 cut(s) 975
SfuI TTCGAA 1 cut(s) 237
SinI GGWCC 1 cut(s) 154
SmiMI CAYNNNNRTG 2 cut(s) 905, 1289
SmlI CTYRAG 1 cut(s) 163
SmoI CTYRAG 1 cut(s) 163
Sse9I AATT 7 cut(s) 40, 202, 233, 685, 1020, 1165, 1392
SseBI AGGCCT 1 cut(s) 850
SsiI CCGC 4 cut(s) 102, 1068, 1134, 1199
SspMI CTAG 5 cut(s) 371, 554, 620, 695, 1242
StuI AGGCCT 1 cut(s) 850
StyD4I CCNGG 3 cut(s) 317, 636, 1107
StyI CCWWGG 2 cut(s) 150, 818
TaaI ACNGT 2 cut(s) 1030, 1465
TaiI ACGT 1 cut(s) 17
TaqI TCGA 6 cut(s) 186, 237, 759, 1032, 1295, 1449
TaqII GACCGA 1 cut(s) 410
TasI AATT 7 cut(s) 40, 202, 233, 685, 1020, 1165, 1392
TatI WGTACW 1 cut(s) 1494
TfiI GAWTC 2 cut(s) 129, 450
Tru1I TTAA 9 cut(s) 18, 164, 383, 516, 570, 644, 996, 1299, 1458
Tru9I TTAA 9 cut(s) 18, 164, 383, 516, 570, 644, 996, 1299, 1458
TscAI CASTG 4 cut(s) 754, 1132, 1152, 1484
TseFI GTSAC 3 cut(s) 142, 704, 1024
TseI GCWGC 3 cut(s) 92, 281, 797
Tsp45I GTSAC 3 cut(s) 142, 704, 1024
TspDTI ATGAA 4 cut(s) 60, 212, 1370, 1411
TspGWI ACGGA 2 cut(s) 172, 1212
TspRI CASTG 4 cut(s) 754, 1132, 1152, 1484
Vha464I CTTAAG 1 cut(s) 163
VpaK11BI GGWCC 1 cut(s) 154
VspI ATTAAT 1 cut(s) 644
XapI RAATTY 3 cut(s) 202, 233, 685
XceI RCATGY 2 cut(s) 226, 1306
XmiI GTMKAC 1 cut(s) 759
XspI CTAG 5 cut(s) 371, 554, 620, 695, 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.