Rh1CG408300

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
67246929 .. 67250875
3947 bp
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UTR
Exon/CDS
Intron
Rh1CG408300.1

Sequence Viewer

Length: 354 bp
ATGAGATATGCAAACTCGATGAAGATTACTGAGACTATGGAAGCCGTTCTGTTACTAAATCATTGTTTCAAGATGACTAGTAAATGGAGCAGTAGCCTCTCCTTAGATGCAATGGCATGGAGCTTTTCTCAGCTTTCATCTGATCCAAGTATCGTAGATCTTGATATTCCATTCAGCCTTGTCTTTGCTTGTGGAGCTACCATAAATGCTTACTCCAATCTTGGAGTACTAGCTCCTGTTACATGGCCAGTCCTGTTTATTTCCATACCAATTGTCTTTCTGGCAATTCAGCTACAGGGTTTGGTTGAATTTCTGAGCAGTGGAGCTGTTGAGGTCAGAGAGTTTGATAAGTAA

Protein Analysis

117

Amino Acids

12.88

Weight (kDa)

4.64

Isoelectric Point (pI)

30.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 137
AcoI YGGCCR 1 cut(s) 245
AcsI RAATTY 1 cut(s) 308
AfaI GTAC 1 cut(s) 228
AgsI TTSAA 2 cut(s) 70, 308
AhlI ACTAGT 1 cut(s) 77
AluBI AGCT 6 cut(s) 123, 133, 197, 233, 292, 326
AluI AGCT 6 cut(s) 123, 133, 197, 233, 292, 326
Alw26I GTCTC 1 cut(s) 26
AlwI GGATC 1 cut(s) 137
AoxI GGCC 1 cut(s) 245
ApoI RAATTY 1 cut(s) 308
Asp700I GAANNNNTTC 1 cut(s) 45
BalI TGGCCA 1 cut(s) 247
BceAI ACGGC 1 cut(s) 29
BcoDI GTCTC 1 cut(s) 26
BcuI ACTAGT 1 cut(s) 77
BfaI CTAG 2 cut(s) 78, 230
BfmI CTRYAG 1 cut(s) 293
BglII AGATCT 1 cut(s) 157
BmcAI AGTACT 1 cut(s) 228
BmsI GCATC 1 cut(s) 97
BplI GAGNNNNNCTC 2 cut(s) 112, 144
Bse1I ACTGG 1 cut(s) 248
Bse3DI GCAATG 1 cut(s) 117
BseMI GCAATG 1 cut(s) 117
BseMII CTCAG 3 cut(s) 21, 143, 305
BseNI ACTGG 1 cut(s) 248
BshFI GGCC 1 cut(s) 247
BsmAI GTCTC 1 cut(s) 26
BsnI GGCC 1 cut(s) 247
Bsp143I GATC 2 cut(s) 142, 157
BspANI GGCC 1 cut(s) 247
BspCNI CTCAG 3 cut(s) 22, 142, 306
BspPI GGATC 1 cut(s) 137
BsrDI GCAATG 1 cut(s) 117
BsrI ACTGG 1 cut(s) 248
BssMI GATC 2 cut(s) 142, 157
BstDEI CTNAG 4 cut(s) 30, 103, 129, 314
BstKTI GATC 2 cut(s) 145, 160
BstMAI GTCTC 1 cut(s) 26
BstMBI GATC 2 cut(s) 142, 157
BstMWI GCNNNNNNNGC 1 cut(s) 194
BstSFI CTRYAG 1 cut(s) 293
BstX2I RGATCY 1 cut(s) 157
BstYI RGATCY 1 cut(s) 157
BsuRI GGCC 1 cut(s) 247
BtsI GCAGTG 1 cut(s) 325
BtsIMutI CAGTG 1 cut(s) 325
Csp6I GTAC 1 cut(s) 227
CviAII CATG 2 cut(s) 117, 243
CviQI GTAC 1 cut(s) 227
DdeI CTNAG 4 cut(s) 30, 103, 129, 314
DpnI GATC 2 cut(s) 144, 159
DpnII GATC 2 cut(s) 142, 157
EaeI YGGCCR 1 cut(s) 245
FaeI CATG 2 cut(s) 120, 246
FaiI YATR 6 cut(s) 9, 38, 118, 203, 244, 266
FatI CATG 2 cut(s) 116, 242
FspBI CTAG 2 cut(s) 78, 230
HaeIII GGCC 1 cut(s) 247
Hin1II CATG 2 cut(s) 120, 246
Hpy188I TCNGA 3 cut(s) 142, 315, 338
Hpy188III TCNNGA 2 cut(s) 70, 161
HpyCH4V TGCA 2 cut(s) 11, 110
HpyF10VI GCNNNNNNNGC 1 cut(s) 194
HpyF3I CTNAG 4 cut(s) 30, 103, 129, 314
Hsp92II CATG 2 cut(s) 120, 246
Kzo9I GATC 2 cut(s) 142, 157
LmnI GCTCC 5 cut(s) 87, 120, 194, 238, 323
LpnPI CCDG 5 cut(s) 249, 261, 266, 266, 281
LweI GCATC 1 cut(s) 97
MaeI CTAG 2 cut(s) 78, 230
MaeIII GTNAC 2 cut(s) 51, 238
MalI GATC 2 cut(s) 144, 159
MboI GATC 2 cut(s) 142, 157
MboII GAAGA 1 cut(s) 34
MfeI CAATTG 1 cut(s) 270
MflI RGATCY 1 cut(s) 157
MlsI TGGCCA 1 cut(s) 247
MluCI AATT 3 cut(s) 270, 285, 308
MluNI TGGCCA 1 cut(s) 247
MnlI CCTC 2 cut(s) 107, 325
Mox20I TGGCCA 1 cut(s) 247
MroXI GAANNNNTTC 1 cut(s) 45
MscI TGGCCA 1 cut(s) 247
Msp20I TGGCCA 1 cut(s) 247
MunI CAATTG 1 cut(s) 270
MwoI GCNNNNNNNGC 1 cut(s) 194
NdeII GATC 2 cut(s) 142, 157
NlaIII CATG 2 cut(s) 120, 246
PdmI GAANNNNTTC 1 cut(s) 45
PsuI RGATCY 1 cut(s) 157
RsaI GTAC 1 cut(s) 228
RsaNI GTAC 1 cut(s) 227
Sau3AI GATC 2 cut(s) 142, 157
ScaI AGTACT 1 cut(s) 228
SetI ASST 7 cut(s) 125, 135, 199, 235, 294, 328, 336
SfaNI GCATC 1 cut(s) 97
SfcI CTRYAG 1 cut(s) 293
SpeI ACTAGT 1 cut(s) 77
Sse9I AATT 3 cut(s) 270, 285, 308
SspMI CTAG 2 cut(s) 78, 230
TaqI TCGA 1 cut(s) 17
TasI AATT 3 cut(s) 270, 285, 308
TatI WGTACW 1 cut(s) 226
TscAI CASTG 1 cut(s) 325
TspDTI ATGAA 2 cut(s) 35, 126
TspRI CASTG 1 cut(s) 325
XapI RAATTY 1 cut(s) 308
XmnI GAANNNNTTC 1 cut(s) 45
XspI CTAG 2 cut(s) 78, 230
ZrmI AGTACT 1 cut(s) 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.