Rh4CG225800

Triose phosphate phosphate translocator, non-green plastid

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
46214912 .. 46215418
507 bp
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UTR
Exon/CDS
Intron
Rh4CG225800.1

Sequence Viewer

Length: 312 bp
ATGCAGACCTCTGCCTTCACTCTCTCGCCGTCTCTCCCTCTCCTCAAGTCTTGCCTCCTCTCAGCCCAACCCTCCACCCTCAGATTCGCTCCCACACGTGTCTCTGCCTTGCTCAAGCCTGACACCGCTCTCACCTCCTCCACCAATGACGCCCTCTCCGCCTCTCTCTCCCGCCGATCCTGGTCTGTCTCCTCCTCCGATGACTTCAAGCCTTGGACTTCTCCTGCCCTCGATCGGAGCCATTTCTCCGGCCCTGGGTATAAAAATGGCCTTAAGGCCAGCGATGATGGTGGAGGAAGCAGAGGTGGTTGA

Protein Analysis

103

Amino Acids

10.76

Weight (kDa)

9.74

Isoelectric Point (pI)

46.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 128
AciI CCGC 3 cut(s) 126, 159, 172
AclWI GGATC 1 cut(s) 171
AcvI CACGTG 1 cut(s) 98
AcyI GRCGYC 1 cut(s) 150
AfiI CCNNNNNNNGG 2 cut(s) 234, 255
AflII CTTAAG 1 cut(s) 272
AflIII ACRYGT 2 cut(s) 95, 97
AgsI TTSAA 1 cut(s) 208
AjnI CCWGG 2 cut(s) 179, 253
Alw26I GTCTC 3 cut(s) 36, 106, 193
AlwI GGATC 1 cut(s) 171
AoxI GGCC 3 cut(s) 250, 268, 276
AspS9I GGNCC 1 cut(s) 251
AsuHPI GGTGA 1 cut(s) 124
BbrPI CACGTG 1 cut(s) 98
BccI CCATC 1 cut(s) 281
BceAI ACGGC 1 cut(s) 13
BciT130I CCWGG 2 cut(s) 181, 255
BcoDI GTCTC 3 cut(s) 36, 106, 193
BfrI CTTAAG 1 cut(s) 272
Bme1390I CCNGG 2 cut(s) 181, 255
BmgT120I GGNCC 1 cut(s) 251
BmiI GGNNCC 1 cut(s) 239
BmrFI CCNGG 2 cut(s) 181, 255
BpuEI CTTGAG 2 cut(s) 29, 98
BsaAI YACGTR 1 cut(s) 98
BsaHI GRCGYC 1 cut(s) 150
BsaJI CCNNGG 3 cut(s) 212, 253, 254
BsaXI ACNNNNNCTCC 2 cut(s) 140, 170
Bsc4I CCNNNNNNNGG 2 cut(s) 234, 255
BseBI CCWGG 2 cut(s) 181, 255
BseDI CCNNGG 3 cut(s) 212, 253, 254
BseLI CCNNNNNNNGG 2 cut(s) 234, 255
BseMII CTCAG 2 cut(s) 75, 94
BseRI GAGGAG 5 cut(s) 32, 47, 127, 181, 184
Bsh1285I CGRYCG 1 cut(s) 235
BshFI GGCC 3 cut(s) 252, 270, 278
BsiEI CGRYCG 1 cut(s) 235
BsiSI CCGG 1 cut(s) 249
BslI CCNNNNNNNGG 2 cut(s) 234, 255
BsmAI GTCTC 3 cut(s) 36, 106, 193
BsmBI CGTCTC 1 cut(s) 36
BsnI GGCC 3 cut(s) 252, 270, 278
Bsp143I GATC 2 cut(s) 176, 232
BspACI CCGC 3 cut(s) 126, 159, 172
BspANI GGCC 3 cut(s) 252, 270, 278
BspCNI CTCAG 2 cut(s) 74, 93
BspLI GGNNCC 1 cut(s) 239
BspPI GGATC 1 cut(s) 171
BspTI CTTAAG 1 cut(s) 272
BsrBI CCGCTC 1 cut(s) 128
BssECI CCNNGG 3 cut(s) 212, 253, 254
BssMI GATC 2 cut(s) 176, 232
BssNI GRCGYC 1 cut(s) 150
BssT1I CCWWGG 1 cut(s) 212
Bst2UI CCWGG 2 cut(s) 181, 255
BstACI GRCGYC 1 cut(s) 150
BstAFI CTTAAG 1 cut(s) 272
BstBAI YACGTR 1 cut(s) 98
BstC8I GCNNGC 1 cut(s) 280
BstDEI CTNAG 2 cut(s) 61, 80
BstKTI GATC 2 cut(s) 179, 235
BstMAI GTCTC 3 cut(s) 36, 106, 193
BstMBI GATC 2 cut(s) 176, 232
BstMCI CGRYCG 1 cut(s) 235
BstMWI GCNNNNNNNGC 1 cut(s) 158
BstNI CCWGG 2 cut(s) 181, 255
BstSCI CCNGG 2 cut(s) 179, 253
BsuRI GGCC 3 cut(s) 252, 270, 278
BtgZI GCGATG 1 cut(s) 297
Cac8I GCNNGC 1 cut(s) 280
Cfr13I GGNCC 1 cut(s) 251
CseI GACGC 1 cut(s) 158
CviJI RGCY 7 cut(s) 65, 118, 211, 240, 252, 270, 278
CviKI_1 RGCY 7 cut(s) 65, 118, 211, 240, 252, 270, 278
DdeI CTNAG 2 cut(s) 61, 80
DpnI GATC 2 cut(s) 178, 234
DpnII GATC 2 cut(s) 176, 232
EciI GGCGGA 1 cut(s) 148
Eco130I CCWWGG 1 cut(s) 212
Eco72I CACGTG 1 cut(s) 98
EcoRII CCWGG 2 cut(s) 179, 253
EcoT14I CCWWGG 1 cut(s) 212
ErhI CCWWGG 1 cut(s) 212
Esp3I CGTCTC 1 cut(s) 36
FaiI YATR 1 cut(s) 261
FauI CCCGC 1 cut(s) 179
HaeIII GGCC 3 cut(s) 252, 270, 278
HapII CCGG 1 cut(s) 249
HgaI GACGC 1 cut(s) 158
Hin1I GRCGYC 1 cut(s) 150
HinfI GANTC 1 cut(s) 84
HpaII CCGG 1 cut(s) 249
HphI GGTGA 1 cut(s) 124
Hpy188I TCNGA 3 cut(s) 83, 199, 237
HpyAV CCTTC 1 cut(s) 25
HpyCH4IV ACGT 1 cut(s) 97
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 1 cut(s) 158
HpyF3I CTNAG 2 cut(s) 61, 80
HpySE526I ACGT 1 cut(s) 97
Hsp92I GRCGYC 1 cut(s) 150
Kzo9I GATC 2 cut(s) 176, 232
LmnI GCTCC 2 cut(s) 94, 237
LpnPI CCDG 8 cut(s) 132, 166, 193, 237, 240, 262, 267, 292
MaeII ACGT 1 cut(s) 97
MalI GATC 2 cut(s) 178, 234
MbiI CCGCTC 1 cut(s) 128
MboI GATC 2 cut(s) 176, 232
MseI TTAA 1 cut(s) 273
MspCI CTTAAG 1 cut(s) 272
MspI CCGG 1 cut(s) 249
MspR9I CCNGG 2 cut(s) 181, 255
MvaI CCWGG 2 cut(s) 181, 255
MwoI GCNNNNNNNGC 1 cut(s) 158
NdeII GATC 2 cut(s) 176, 232
NlaIV GGNNCC 1 cut(s) 239
PasI CCCWGGG 1 cut(s) 254
PfeI GAWTC 1 cut(s) 84
Ple19I CGATCG 1 cut(s) 235
PmaCI CACGTG 1 cut(s) 98
PmlI CACGTG 1 cut(s) 98
Ppu21I YACGTR 1 cut(s) 98
Psp6I CCWGG 2 cut(s) 179, 253
PspCI CACGTG 1 cut(s) 98
PspGI CCWGG 2 cut(s) 179, 253
PspN4I GGNNCC 1 cut(s) 239
PspPI GGNCC 1 cut(s) 251
PvuI CGATCG 1 cut(s) 235
SaqAI TTAA 1 cut(s) 273
Sau3AI GATC 2 cut(s) 176, 232
Sau96I GGNCC 1 cut(s) 251
ScrFI CCNGG 2 cut(s) 181, 255
SetI ASST 4 cut(s) 11, 100, 137, 307
SmlI CTYRAG 3 cut(s) 44, 113, 272
SmoI CTYRAG 3 cut(s) 44, 113, 272
SsiI CCGC 3 cut(s) 126, 159, 172
StyD4I CCNGG 2 cut(s) 179, 253
StyI CCWWGG 1 cut(s) 212
TaiI ACGT 1 cut(s) 100
TaqI TCGA 1 cut(s) 231
TfiI GAWTC 1 cut(s) 84
Tru1I TTAA 1 cut(s) 273
Tru9I TTAA 1 cut(s) 273
Vha464I CTTAAG 1 cut(s) 272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.