Rh6AG403900

Mitogen-activated protein kinase kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0001271
Physical Location & Seq
Reverse (-)
60068831 .. 60073943
5113 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG403900.1

Sequence Viewer

Length: 1758 bp
ATGACTCATTTTGATATATTTGAAGGGGGCATTCTGACATTTTCAACCGACGGCTTCAACAAAACCCACAGCAGCACCACCAGCTGCCACCGCCTACCACTTCCACAACCTTCTTCTTCAACCTTTCCCAATCACCTAATGCCTTCTCCATCTCAATCTCTTCAAAAACGAACCTTTTTTACATCTTCATCTTCTACTCCTGCTTCCTCCTCCTCCTCTGTCTCAGCTCTGAGACCCGGGATCAACAGAAGCGGCAGTGATGTTAACAGCCCACGGCGGCTCACGCGCCAGAGGAGGCTGCGCTACCTCACGAGCCCCGAGGATCTCGACTCTTTCGGGGTCCCGGAGAAGTCTCGCTCATCGCCCACCTCGCCTGAATATTCGACCCGTAGATCACGCTCTCCGTGTGGCGAGTCAAACCCAAATTCACGCTCTCCTCCCGGTGGCGAGTCGGCCCCATGTTCTCGGTCTTCGGTCGGTGACTCGGCCCGAAAGTCATGCTCCTCTTCTTTCGTTGCTGGGCCTCAAGGCCCACAACCCTTGCCGCTTCCGGAGAACAACCGGAGACCCGACTGCGTCTCCTTCTTCAGCCCTGTGGTCGGCAGGAAGAGCGTCGATCAAGCTGCCACAAGCTCATCATCACCGGCGAAGTCTTCCAAGAACCGATGCCGAGATGCAAACAATTCCTGCGGGGGTGGGGGCGGGAGTGGGGGTTTTAATTTCCATTTGGGTTTGAATGTTCAATCTAGGACTACTAGGAGTGCCCCACAGACTGTTTTTAGCTCAAGTCATCATCCCGTTAGCCCACAAAGATCAAACACAGTGGATATTTTGCCTTGTCAGTCACATGTTGCAGGCAACTATTATAACAGGGGAATGGGAATGGCAGTGTCACCGGAGGCTACCTTTGAACGTGAAACTTACAACTTGAGCAGGAGTGCTCCAACCAGTGTTCTCTCAAGTCCTGCGGTTAGCCCGCGCCGATCAACCACTGTGGATCCTTTTCCTTTTTTCACGACCCATCAAGATCAATATCAGGATGGTGCTACCTTTCCCTCCTTTTTGTCACCAAACAAGCCTACACTCAGTCCCACTCATTCTCCACTCCATAGCCCTACGCCTCGAAGTCCACGCTTCAGCCCCAATGCTTCAAACTATGAGAGTAGTCTTGCCAATGCTCACCCGTTGCCTCTGCCTCCTGGAGCCGCAGTGCCAGCACAGCCGCCCTCTATCACTATGCATCAAAATAATGTAGTAACCGTATCATCAATGAAGGGTCAATGGCAGAAGGGGAAACTTATCGGACGGGGTACCTTTGGTAGTGTTTATCTTGCAACCAACCGAGAAACTGGGGCCTTGTGTGCAATGAAGGAAGTTGATCTCATTCCTGATGATCCTAAATCTGCAGAAAGTATAAAGCAATTGGAGCAGGAAATTAAAGTCCTCCGTACGCTAAAGCATCCAAATATTGTGCAGTACTATGGTAGTGAAGTGGTGAGTATCAAGTTATATACTTATATGTTCTACATATTATTGAAGACTAATCTGTACAAGTTGACTGAGTTTGGAAATAACGTTTGTGCTCTGCAGATTGATGATCATTTCTACATATATTTAGAATATGTTCACCCCGGATCAATAAATAAATATGTCCGAGACCATATTGGAGCTATGACTGAATCCGTAATCCGCAATTTTACCCGCCATATCCTCTGTGGGTTGGCTTTTTTGCATGACACGAAGACAATTCACAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04010 ko04011 ko04139 ko04722 ko04912 ko05166 map04010 map04011 map04139 map04722 map04912 map05166
Pfam Domains
Protein Families
Pkinase

Protein Analysis

585

Amino Acids

63.81

Weight (kDa)

9.55

Isoelectric Point (pI)

77.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 428 - 585 5.4e-23 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 431 - 502 8.9e-07 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 867
Acc65I GGTACC 1 cut(s) 1310
AccB1I GGYRCC 1 cut(s) 1310
AccII CGCG 2 cut(s) 286, 979
AccIII TCCGGA 1 cut(s) 550
AclI AACGTT 1 cut(s) 1575
AclWI GGATC 6 cut(s) 248, 330, 992, 1005, 1388, 1642
AcsI RAATTY 1 cut(s) 424
AcuI CTGAAG 2 cut(s) 571, 1120
AfaI GTAC 4 cut(s) 1312, 1450, 1478, 1550
AfiI CCNNNNNNNGG 2 cut(s) 443, 599
AflIII ACRYGT 1 cut(s) 847
AjnI CCWGG 1 cut(s) 1198
AluBI AGCT 6 cut(s) 84, 227, 623, 633, 783, 1670
AluI AGCT 6 cut(s) 84, 227, 623, 633, 783, 1670
Alw21I GWGCWC 2 cut(s) 943, 1585
Alw26I GTCTC 6 cut(s) 226, 226, 357, 559, 583, 1650
AlwI GGATC 6 cut(s) 248, 330, 992, 1005, 1388, 1642
Ama87I CYCGRG 2 cut(s) 236, 317
Aor13HI TCCGGA 1 cut(s) 550
AoxI GGCC 5 cut(s) 453, 486, 521, 529, 1353
ApeKI GCWGC 4 cut(s) 72, 84, 298, 623
ApoI RAATTY 1 cut(s) 424
Asp700I GAANNNNTTC 1 cut(s) 1623
Asp718I GGTACC 1 cut(s) 1310
AspLEI GCGC 3 cut(s) 288, 303, 981
AspS9I GGNCC 6 cut(s) 340, 454, 487, 521, 530, 1353
AsuC2I CCSGG 5 cut(s) 237, 238, 344, 441, 1632
AsuHPI GGTGA 8 cut(s) 125, 491, 633, 885, 1059, 1172, 1507, 1619
AvaI CYCGRG 2 cut(s) 236, 317
AvaII GGWCC 1 cut(s) 340
BaeGI GKGCMC 1 cut(s) 766
BamHI GGATCC 1 cut(s) 997
BanI GGYRCC 1 cut(s) 1310
BanII GRGCYC 1 cut(s) 317
BauI CACGAG 1 cut(s) 310
BbsI GAAGAC 4 cut(s) 462, 645, 1544, 1748
Bbv12I GWGCWC 2 cut(s) 943, 1585
BbvI GCAGC 4 cut(s) 71, 84, 285, 610
BccI CCATC 3 cut(s) 157, 1029, 1034
BceAI ACGGC 2 cut(s) 67, 290
BcgI CGANNNNNNTGC 4 cut(s) 480, 514, 605, 639
BciT130I CCWGG 1 cut(s) 1200
BclI TGATCA 1 cut(s) 1597
BcnI CCSGG 5 cut(s) 237, 238, 344, 441, 1632
BcoDI GTCTC 6 cut(s) 226, 226, 357, 559, 583, 1650
BfaI CTAG 2 cut(s) 747, 756
BfmI CTRYAG 2 cut(s) 1404, 1586
BisI GCNGC 9 cut(s) 73, 85, 253, 278, 299, 545, 624, 1206, 1223
BlsI GCNGC 9 cut(s) 74, 86, 254, 279, 300, 546, 625, 1207, 1224
BmcAI AGTACT 1 cut(s) 1478
Bme1390I CCNGG 6 cut(s) 237, 238, 344, 441, 1200, 1632
Bme18I GGWCC 1 cut(s) 340
BmeT110I CYCGRG 2 cut(s) 236, 317
BmgT120I GGNCC 6 cut(s) 340, 454, 487, 521, 530, 1353
BmiI GGNNCC 7 cut(s) 341, 342, 456, 999, 1204, 1312, 1354
BmrFI CCNGG 6 cut(s) 237, 238, 344, 441, 1200, 1632
BmrI ACTGGG 1 cut(s) 1359
BmsI GCATC 4 cut(s) 656, 664, 1249, 1468
BmuI ACTGGG 1 cut(s) 1359
BpiI GAAGAC 4 cut(s) 462, 645, 1544, 1748
BpmI CTGGAG 1 cut(s) 1221
BpuEI CTTGAG 4 cut(s) 510, 769, 943, 949
BpuMI CCSGG 5 cut(s) 237, 238, 344, 441, 1632
BsaBI GATNNNNATC 1 cut(s) 1032
BsaI GGTCTC 3 cut(s) 226, 559, 1650
BsaJI CCNNGG 4 cut(s) 236, 272, 318, 1630
BsaWI WCCGGW 3 cut(s) 550, 561, 895
BsaXI ACNNNNNCTCC 8 cut(s) 563, 593, 697, 727, 1084, 1114, 1194, 1224
Bsc4I CCNNNNNNNGG 2 cut(s) 443, 599
Bse118I RCCGGY 1 cut(s) 643
Bse1I ACTGG 2 cut(s) 948, 1354
Bse3DI GCAATG 1 cut(s) 1371
Bse8I GATNNNNATC 1 cut(s) 1032
BseAI TCCGGA 1 cut(s) 550
BseBI CCWGG 1 cut(s) 1200
BseDI CCNNGG 4 cut(s) 236, 272, 318, 1630
BseGI GGATG 3 cut(s) 793, 1045, 1459
BseJI GATNNNNATC 1 cut(s) 1032
BseLI CCNNNNNNNGG 2 cut(s) 443, 599
BseMI GCAATG 1 cut(s) 1371
BseMII CTCAG 4 cut(s) 221, 237, 1099, 1551
BseNI ACTGG 2 cut(s) 948, 1354
BseRI GAGGAG 6 cut(s) 199, 202, 205, 307, 426, 493
BseSI GKGCMC 1 cut(s) 766
BseXI GCAGC 4 cut(s) 71, 84, 285, 610
BseYI CCCAGC 1 cut(s) 518
BsgI GTGCAG 1 cut(s) 1493
Bsh1236I CGCG 2 cut(s) 286, 979
Bsh1285I CGRYCG 1 cut(s) 477
BshFI GGCC 5 cut(s) 455, 488, 523, 531, 1355
BshNI GGYRCC 1 cut(s) 1310
BsiEI CGRYCG 1 cut(s) 477
BsiHKAI GWGCWC 2 cut(s) 943, 1585
BsiHKCI CYCGRG 2 cut(s) 236, 317
BsiSI CCGG 8 cut(s) 237, 344, 441, 551, 562, 644, 896, 1632
BsiWI CGTACG 1 cut(s) 1448
BslFI GGGAC 2 cut(s) 326, 1074
BslI CCNNNNNNNGG 2 cut(s) 443, 599
BsmAI GTCTC 6 cut(s) 226, 226, 357, 559, 583, 1650
BsmBI CGTCTC 1 cut(s) 583
BsmFI GGGAC 2 cut(s) 326, 1074
BsmI GAATGC 1 cut(s) 30
BsnI GGCC 5 cut(s) 455, 488, 523, 531, 1355
Bso31I GGTCTC 3 cut(s) 226, 559, 1650
BsoBI CYCGRG 2 cut(s) 236, 317
Bsp1286I GDGCHC 4 cut(s) 317, 766, 943, 1585
Bsp13I TCCGGA 1 cut(s) 550
Bsp1407I TGTACA 1 cut(s) 1548
BspANI GGCC 5 cut(s) 455, 488, 523, 531, 1355
BspCNI CTCAG 4 cut(s) 222, 236, 1098, 1552
BspEI TCCGGA 1 cut(s) 550
BspFNI CGCG 2 cut(s) 286, 979
BspLI GGNNCC 7 cut(s) 341, 342, 456, 999, 1204, 1312, 1354
BspMAI CTGCAG 2 cut(s) 1408, 1590
BspPI GGATC 6 cut(s) 248, 330, 992, 1005, 1388, 1642
BspQI GCTCTTC 1 cut(s) 602
BspT107I GGYRCC 1 cut(s) 1310
BspTNI GGTCTC 3 cut(s) 226, 559, 1650
BsrDI GCAATG 1 cut(s) 1371
BsrFI RCCGGY 1 cut(s) 643
BsrGI TGTACA 1 cut(s) 1548
BsrI ACTGG 2 cut(s) 948, 1354
BssAI RCCGGY 1 cut(s) 643
BssECI CCNNGG 4 cut(s) 236, 272, 318, 1630
BssSI CACGAG 1 cut(s) 310
Bst2BI CACGAG 1 cut(s) 310
Bst2UI CCWGG 1 cut(s) 1200
Bst4CI ACNGT 4 cut(s) 775, 823, 994, 1261
Bst6I CTCTTC 3 cut(s) 165, 511, 602
BstAUI TGTACA 1 cut(s) 1548
BstC8I GCNNGC 3 cut(s) 856, 977, 1215
BstDEI CTNAG 4 cut(s) 223, 230, 1085, 1560
BstDSI CCRYGG 1 cut(s) 272
BstF5I GGATG 3 cut(s) 793, 1045, 1459
BstFNI CGCG 2 cut(s) 286, 979
BstHHI GCGC 3 cut(s) 288, 303, 981
BstMAI GTCTC 6 cut(s) 226, 226, 357, 559, 583, 1650
BstMCI CGRYCG 1 cut(s) 477
BstMWI GCNNNNNNNGC 9 cut(s) 81, 90, 283, 370, 609, 1214, 1219, 1361, 1426
BstNI CCWGG 1 cut(s) 1200
BstNSI RCATGY 1 cut(s) 851
BstSCI CCNGG 6 cut(s) 235, 236, 342, 439, 1198, 1630
BstSFI CTRYAG 2 cut(s) 1404, 1586
BstSLI GKGCMC 1 cut(s) 766
BstUI CGCG 2 cut(s) 286, 979
BstV1I GCAGC 4 cut(s) 71, 84, 285, 610
BstV2I GAAGAC 4 cut(s) 462, 645, 1544, 1748
BstX2I RGATCY 2 cut(s) 322, 997
BstYI RGATCY 2 cut(s) 322, 997
BsuRI GGCC 5 cut(s) 455, 488, 523, 531, 1355
BtgI CCRYGG 1 cut(s) 272
BtgZI GCGATG 1 cut(s) 345
BtsCI GGATG 3 cut(s) 793, 1045, 1459
BtsI GCAGTG 3 cut(s) 262, 894, 1215
BtsIMutI CAGTG 6 cut(s) 262, 828, 894, 955, 990, 1215
Cac8I GCNNGC 3 cut(s) 856, 977, 1215
CfoI GCGC 3 cut(s) 288, 303, 981
Cfr10I RCCGGY 1 cut(s) 643
Cfr13I GGNCC 6 cut(s) 340, 454, 487, 521, 530, 1353
Cfr9I CCCGGG 1 cut(s) 236
CseI GACGC 2 cut(s) 565, 601
Csp6I GTAC 4 cut(s) 1311, 1449, 1477, 1549
CspCI CAANNNNNGTGG 6 cut(s) 522, 557, 804, 839, 975, 1010
CviAII CATG 4 cut(s) 459, 498, 848, 1733
CviQI GTAC 4 cut(s) 1311, 1449, 1477, 1549
DdeI CTNAG 4 cut(s) 223, 230, 1085, 1560
Eam1104I CTCTTC 3 cut(s) 165, 511, 602
EarI CTCTTC 3 cut(s) 165, 511, 602
Eco24I GRGCYC 1 cut(s) 317
Eco31I GGTCTC 3 cut(s) 226, 559, 1650
Eco47I GGWCC 1 cut(s) 340
Eco57I CTGAAG 2 cut(s) 571, 1120
Eco88I CYCGRG 2 cut(s) 236, 317
EcoO109I RGGNCCY 2 cut(s) 340, 1353
EcoRII CCWGG 1 cut(s) 1198
EcoT22I ATGCAT 1 cut(s) 1242
EcoT38I GRGCYC 1 cut(s) 317
Esp3I CGTCTC 1 cut(s) 583
FaeI CATG 4 cut(s) 462, 501, 851, 1736
FaqI GGGAC 2 cut(s) 326, 1074
FatI CATG 4 cut(s) 458, 497, 847, 1732
FauI CCCGC 4 cut(s) 683, 695, 984, 1709
FbaI TGATCA 1 cut(s) 1597
Fnu4HI GCNGC 9 cut(s) 73, 85, 253, 278, 299, 545, 624, 1206, 1223
FokI GGATG 3 cut(s) 780, 1052, 1446
FriOI GRGCYC 1 cut(s) 317
Fsp4HI GCNGC 9 cut(s) 73, 85, 253, 278, 299, 545, 624, 1206, 1223
FspBI CTAG 2 cut(s) 747, 756
GlaI GCGC 3 cut(s) 287, 302, 980
GluI GCNGC 9 cut(s) 73, 85, 253, 278, 299, 545, 624, 1206, 1223
GsaI CCCAGC 1 cut(s) 522
GsuI CTGGAG 1 cut(s) 1221
HaeIII GGCC 5 cut(s) 455, 488, 523, 531, 1355
HapII CCGG 8 cut(s) 237, 344, 441, 551, 562, 644, 896, 1632
HgaI GACGC 2 cut(s) 565, 601
HhaI GCGC 3 cut(s) 288, 303, 981
Hin1II CATG 4 cut(s) 462, 501, 851, 1736
Hin6I GCGC 3 cut(s) 286, 301, 979
HinP1I GCGC 3 cut(s) 286, 301, 979
HincII GTYRAC 2 cut(s) 265, 1557
HindII GTYRAC 2 cut(s) 265, 1557
HinfI GANTC 6 cut(s) 4, 329, 413, 449, 482, 1679
HpaI GTTAAC 1 cut(s) 265
HpaII CCGG 8 cut(s) 237, 344, 441, 551, 562, 644, 896, 1632
HphI GGTGA 8 cut(s) 125, 491, 633, 885, 1059, 1172, 1507, 1619
Hpy166II GTNNAC 4 cut(s) 265, 1130, 1557, 1627
Hpy188I TCNGA 4 cut(s) 36, 231, 1304, 1655
Hpy188III TCNNGA 7 cut(s) 310, 326, 551, 1015, 1025, 1037, 1388
Hpy8I GTNNAC 4 cut(s) 265, 1130, 1557, 1627
Hpy99I CGWCG 2 cut(s) 53, 617
HpyAV CCTTC 7 cut(s) 17, 120, 153, 592, 1267, 1282, 1363
HpyCH4III ACNGT 4 cut(s) 775, 823, 994, 1261
HpyCH4IV ACGT 2 cut(s) 913, 1575
HpyCH4V TGCA 9 cut(s) 677, 854, 1240, 1334, 1364, 1406, 1474, 1588, 1732
HpyF10VI GCNNNNNNNGC 9 cut(s) 81, 90, 283, 370, 609, 1214, 1219, 1361, 1426
HpyF3I CTNAG 4 cut(s) 223, 230, 1085, 1560
HpySE526I ACGT 2 cut(s) 913, 1575
Hsp92II CATG 4 cut(s) 462, 501, 851, 1736
HspAI GCGC 3 cut(s) 286, 301, 979
KflI GGGWCCC 1 cut(s) 340
Kpn2I TCCGGA 1 cut(s) 550
KpnI GGTACC 1 cut(s) 1314
Ksp22I TGATCA 1 cut(s) 1597
KspAI GTTAAC 1 cut(s) 265
LguI GCTCTTC 1 cut(s) 602
LmnI GCTCC 5 cut(s) 506, 946, 1202, 1426, 1667
Lsp1109I GCAGC 4 cut(s) 71, 84, 285, 610
LweI GCATC 4 cut(s) 656, 664, 1249, 1468
MaeI CTAG 2 cut(s) 747, 756
MaeII ACGT 2 cut(s) 913, 1575
MaeIII GTNAC 5 cut(s) 479, 843, 891, 1065, 1255
MfeI CAATTG 1 cut(s) 1421
MflI RGATCY 2 cut(s) 322, 997
MhlI GDGCHC 4 cut(s) 317, 766, 943, 1585
MluCI AATT 7 cut(s) 424, 682, 718, 1421, 1434, 1693, 1746
MlyI GAGTC 4 cut(s) 323, 422, 458, 476
MmeI TCCRAC 1 cut(s) 968
Mph1103I ATGCAT 1 cut(s) 1242
MroI TCCGGA 1 cut(s) 550
MroXI GAANNNNTTC 1 cut(s) 1623
MseI TTAA 3 cut(s) 264, 717, 1437
MspA1I CMGCKG 1 cut(s) 84
MspI CCGG 8 cut(s) 237, 344, 441, 551, 562, 644, 896, 1632
MspR9I CCNGG 6 cut(s) 237, 238, 344, 441, 1200, 1632
MunI CAATTG 1 cut(s) 1421
Mva1269I GAATGC 1 cut(s) 30
MvaI CCWGG 1 cut(s) 1200
MvnI CGCG 2 cut(s) 286, 979
MwoI GCNNNNNNNGC 9 cut(s) 81, 90, 283, 370, 609, 1214, 1219, 1361, 1426
NciI CCSGG 5 cut(s) 237, 238, 344, 441, 1632
NlaIII CATG 4 cut(s) 462, 501, 851, 1736
NlaIV GGNNCC 7 cut(s) 341, 342, 456, 999, 1204, 1312, 1354
NmeAIII GCCGAG 2 cut(s) 464, 695
NmuCI GTSAC 4 cut(s) 479, 843, 891, 1065
NsiI ATGCAT 1 cut(s) 1242
NspI RCATGY 1 cut(s) 851
PciI ACATGT 1 cut(s) 847
PciSI GCTCTTC 1 cut(s) 602
PctI GAATGC 1 cut(s) 30
PdmI GAANNNNTTC 1 cut(s) 1623
PfeI GAWTC 1 cut(s) 1679
Pfl23II CGTACG 1 cut(s) 1448
PflFI GACNNNGTC 1 cut(s) 575
PfoI TCCNGGA 2 cut(s) 342, 1198
PkrI GCNGC 9 cut(s) 74, 86, 254, 279, 300, 546, 625, 1207, 1224
PleI GAGTC 4 cut(s) 323, 421, 457, 476
PpsI GAGTC 4 cut(s) 323, 421, 457, 476
PpuMI RGGWCCY 1 cut(s) 340
PscI ACATGT 1 cut(s) 847
PsiI TTATAA 1 cut(s) 867
Psp1406I AACGTT 1 cut(s) 1575
Psp5II RGGWCCY 1 cut(s) 340
Psp6I CCWGG 1 cut(s) 1198
PspFI CCCAGC 1 cut(s) 518
PspGI CCWGG 1 cut(s) 1198
PspLI CGTACG 1 cut(s) 1448
PspN4I GGNNCC 7 cut(s) 341, 342, 456, 999, 1204, 1312, 1354
PspPI GGNCC 6 cut(s) 340, 454, 487, 521, 530, 1353
PspPPI RGGWCCY 1 cut(s) 340
PsrI GAACNNNNNNTAC 2 cut(s) 163, 195
PstI CTGCAG 2 cut(s) 1408, 1590
PsuI RGATCY 2 cut(s) 322, 997
PsyI GACNNNGTC 1 cut(s) 575
PvuII CAGCTG 1 cut(s) 84
RsaI GTAC 4 cut(s) 1312, 1450, 1478, 1550
RsaNI GTAC 4 cut(s) 1311, 1449, 1477, 1549
SapI GCTCTTC 1 cut(s) 602
SaqAI TTAA 3 cut(s) 264, 717, 1437
SatI GCNGC 9 cut(s) 73, 85, 253, 278, 299, 545, 624, 1206, 1223
Sau96I GGNCC 6 cut(s) 340, 454, 487, 521, 530, 1353
ScaI AGTACT 1 cut(s) 1478
SchI GAGTC 4 cut(s) 323, 422, 458, 476
ScrFI CCNGG 6 cut(s) 237, 238, 344, 441, 1200, 1632
SduI GDGCHC 4 cut(s) 317, 766, 943, 1585
SfaNI GCATC 4 cut(s) 656, 664, 1249, 1468
SfcI CTRYAG 2 cut(s) 1404, 1586
SgrAI CRCCGGYG 1 cut(s) 643
SinI GGWCC 1 cut(s) 340
SmaI CCCGGG 1 cut(s) 238
SmlI CTYRAG 4 cut(s) 525, 784, 928, 958
SmoI CTYRAG 4 cut(s) 525, 784, 928, 958
Sse9I AATT 7 cut(s) 424, 682, 718, 1421, 1434, 1693, 1746
SspI AATATT 2 cut(s) 380, 1468
SspMI CTAG 2 cut(s) 747, 756
StyD4I CCNGG 6 cut(s) 235, 236, 342, 439, 1198, 1630
TaaI ACNGT 4 cut(s) 775, 823, 994, 1261
TaiI ACGT 2 cut(s) 916, 1578
TaqI TCGA 4 cut(s) 327, 383, 615, 1123
TaqII GACCGA 2 cut(s) 456, 463
TasI AATT 7 cut(s) 424, 682, 718, 1421, 1434, 1693, 1746
TatI WGTACW 2 cut(s) 1476, 1548
TauI GCSGC 5 cut(s) 255, 280, 547, 1208, 1225
TfiI GAWTC 1 cut(s) 1679
Tru1I TTAA 3 cut(s) 264, 717, 1437
Tru9I TTAA 3 cut(s) 264, 717, 1437
TscAI CASTG 6 cut(s) 262, 828, 894, 955, 997, 1215
TseFI GTSAC 4 cut(s) 479, 843, 891, 1065
TseI GCWGC 4 cut(s) 72, 84, 298, 623
Tsp45I GTSAC 4 cut(s) 479, 843, 891, 1065
TspDTI ATGAA 3 cut(s) 177, 1286, 1382
TspGWI ACGGA 3 cut(s) 393, 1436, 1672
TspMI CCCGGG 1 cut(s) 236
TspRI CASTG 6 cut(s) 262, 828, 894, 955, 997, 1215
Tth111I GACNNNGTC 1 cut(s) 575
VpaK11BI GGWCC 1 cut(s) 340
XapI RAATTY 1 cut(s) 424
XceI RCATGY 1 cut(s) 851
XcmI CCANNNNNNNNNTGG 1 cut(s) 1712
XmaI CCCGGG 1 cut(s) 236
XmnI GAANNNNTTC 1 cut(s) 1623
XspI CTAG 2 cut(s) 747, 756
ZrmI AGTACT 1 cut(s) 1478
Zsp2I ATGCAT 1 cut(s) 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.