Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000857

Physical Location & Seq

Genomic Coordinates Reverse (-)

15193694 .. 15195558

Gene Structure 1865 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G36230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 915 bp

ATGAGAACTTTGAGCTCCCAATTATACTCCAATGGTGGTCTCACTTGGTTCCAGAAGAAGAATCAGAGCTCTCTGTTCATCAAGCATCTCAGAGTCTCTAAACCATCGAGGGTTCAGCTCATATCTGCTGTTCAATTCCGTCCGTGCATCGATATTCATAAGGGAAAAGTGAAACAGATAGTTGGATCCACACTTCGTGACTTGAAAGAGGATGGTTCAGTTCTCGTTACGAATTTTGAATCGGATAAGTCTGCGGAAGAGTATGCAAAGATGTACAAAGAAGATGGGCTTACGGGTGGTCATGTGATAATGCTTGGAGCAGACCCTTTAAGCCAAGCTGCAGCTATTGGAGCATTACATGCTTATCCTGGCGGTTTGCAAGTTGGAGGTGGAATCAATTCTGAGAATTGCATGAGTTATATTGAGGAGGGAGCAAGCCATGTCATTGTCACTTCGTATGTATTTAACAATGGAAAGATTGATCTTGAAAGACTCAAAGATATTGTGAGCATTGTTGGGAAACAAAGACTGATATTGGACCTTAGCTGCAGAAAGAAGGATGGAAGATACGCAATTGTTACTGATAGATGGCAGAAGTTCAGCGACGTCATCCTTGACGAGAAATCATTGGAGTTTCTTGGAGGATTTTCAGATGAGTTTCTGGTGCATGGCGTAGACGTTGAAGGAAAGAAGCTAGGGATCGATGAAGAGCTTGTAGCATTGCTTGGCAACTACTCTCCGATTCCAGTAACTTATGCGGGAGGTGTGACGGTAATGGATGATGTAGAGAGGATCAAGGACGCAGGAAAGGGACGTGTAGATGTAACAGTGGGAAGTGCCTTAGACATTTTCGGGGGAAATCTTCCATACAAAGACGTCGTCGCTTGGCATCACAAGCAGCACTCACTCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000105 GO:0000162 GO:0003674 GO:0003824 GO:0003949 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006547 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016853 GO:0016860 GO:0016861 GO:0018130 GO:0019438 GO:0019752 GO:0034641 GO:0042401 GO:0042430 GO:0042435 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0052803 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00340 ko01100 ko01110 ko01230 map00340 map01100 map01110 map01230

Pfam Domains

Protein Families

His_biosynth

Protein Analysis

304

Amino Acids

33.36

Weight (kDa)

6.56

Isoelectric Point (pI)

30.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
His_biosynth	PF00977	48 - 281	3.4e-26	Histidine biosynthesis protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000857)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36230
fragaria_vesca	FvH4_6g18790 FvH4_6g18790 FvH4_6g18790 FvH4_6g18790 FvH4_6g18790 FvH4_6g18790
malus_domestica	MD12G1036500.v1.1 MD14G1023300.v1.1
prunus_persica	Prupe.7G109700_v2.0.a1 Prupe.7G109700_v2.0.a1 Prupe.7G109700_v2.0.a1 Prupe.7G109700_v2.0.a1 Prupe.7G109700_v2.0.a1 Prupe.7G109700_v2.0.a1
pyrus_communis	pycom12g02400 pycom14g02220 pycom14g02230
rosa_chinensis	RchiOBHm_Chr1g0324901 RchiOBHm_Chr1g0350151 RchiOBHm_Chr3g0473801 RchiOBHm_Chr4g0393091 RchiOBHm_Chr4g0409701 RchiOBHm_Chr5g0027171
rosa_laevigata	RLG00000014193 RLG00000023983 RLG00000035737
rosa_multiflora	Rmu_sc0001207.1_g000028 Rmu_sc0002986.1_g000013 Rmu_sc0007035.1_g000005 Rmu_sc0016122.1_g000001 Rmu_sc0037919.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029230 Rroxscaffold_1G00029310 Rroxscaffold_2G00114250 Rroxscaffold_3G00260930 Rroxscaffold_3G00260940 Rroxscaffold_4G00311820 Rroxscaffold_4G00332560 Rroxscaffold_5G00338520 Rroxscaffold_5G00355640 Rroxscaffold_6G00407790
rosa_rugosa	Rorug01G0107500 Rorug02G0045900 Rorug03G0135600 Rorug06G0225600 Rorug07G0319400 Rorug07G0330900
rosa_samantha	Rh1AG080400 Rh1AG119900 Rh1AG120000 Rh1AG233100 Rh1CG115000 Rh1CG217700 Rh2BG241500 Rh2BG353000 Rh2DG556200 Rh3AG186100 Rh3AG202300 Rh3BG214400 Rh3CG211200 Rh3DG210400 Rh3DG227900 Rh5AG343700 Rh5DG191000
rosa_wichuraiana	Rw1G018100 Rw3G017000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	609, 879
AccI	GTMKAC	1 cut(s)	675
AciI	CCGC	3 cut(s)	254, 372, 758
AclWI	GGATC	4 cut(s)	180, 193, 707, 800
AcsI	RAATTY	1 cut(s)	232
AcyI	GRCGYC	2 cut(s)	606, 876
AdeI	CACNNNGTG	1 cut(s)	197
AfaI	GTAC	1 cut(s)	275
AflIII	ACRYGT	1 cut(s)	814
AgsI	TTSAA	5 cut(s)	134, 205, 239, 488, 683
AjiI	CACGTC	1 cut(s)	815
AjnI	CCWGG	1 cut(s)	367
AluBI	AGCT	8 cut(s)	15, 69, 118, 338, 344, 546, 694, 712
AluI	AGCT	8 cut(s)	15, 69, 118, 338, 344, 546, 694, 712
Alw21I	GWGCWC	2 cut(s)	17, 71
Alw26I	GTCTC	2 cut(s)	44, 100
AlwI	GGATC	4 cut(s)	180, 193, 707, 800
ApeKI	GCWGC	4 cut(s)	338, 341, 546, 898
ApoI	RAATTY	1 cut(s)	232
ArsI	GACNNNNNNTTYG	2 cut(s)	864, 896
Asp700I	GAANNNNTTC	1 cut(s)	397
AspS9I	GGNCC	1 cut(s)	538
AvaII	GGWCC	1 cut(s)	538
BamHI	GGATCC	1 cut(s)	185
BanII	GRGCYC	2 cut(s)	17, 71
Bbv12I	GWGCWC	2 cut(s)	17, 71
BbvI	GCAGC	4 cut(s)	325, 353, 533, 910
BccI	CCATC	5 cut(s)	112, 206, 278, 554, 582
BciT130I	CCWGG	1 cut(s)	369
BcoDI	GTCTC	2 cut(s)	44, 100
BfaI	CTAG	1 cut(s)	695
BfmI	CTRYAG	2 cut(s)	339, 547
BisI	GCNGC	4 cut(s)	339, 342, 547, 899
BlsI	GCNGC	4 cut(s)	340, 343, 548, 900
Bme1390I	CCNGG	1 cut(s)	369
Bme18I	GGWCC	1 cut(s)	538
BmgBI	CACGTC	1 cut(s)	815
BmgT120I	GGNCC	1 cut(s)	538
BmiI	GGNNCC	2 cut(s)	50, 187
BmrFI	CCNGG	1 cut(s)	369
BmsI	GCATC	3 cut(s)	94, 156, 898
Bpu10I	CCTNAGC	1 cut(s)	542
Bsa29I	ATCGAT	2 cut(s)	150, 702
BsaHI	GRCGYC	2 cut(s)	606, 876
BsaI	GGTCTC	1 cut(s)	44
Bse1I	ACTGG	1 cut(s)	746
Bse3DI	GCAATG	1 cut(s)	719
BseBI	CCWGG	1 cut(s)	369
BseCI	ATCGAT	2 cut(s)	150, 702
BseGI	GGATG	4 cut(s)	217, 565, 609, 784
BseMI	GCAATG	1 cut(s)	719
BseMII	CTCAG	2 cut(s)	103, 393
BseNI	ACTGG	1 cut(s)	746
BseRI	GAGGAG	1 cut(s)	440
BseXI	GCAGC	4 cut(s)	325, 353, 533, 910
BshVI	ATCGAT	2 cut(s)	150, 702
BsiHKAI	GWGCWC	2 cut(s)	17, 71
BslFI	GGGAC	1 cut(s)	825
BsmAI	GTCTC	2 cut(s)	44, 100
BsmFI	GGGAC	1 cut(s)	825
Bso31I	GGTCTC	1 cut(s)	44
Bsp1286I	GDGCHC	2 cut(s)	17, 71
Bsp1407I	TGTACA	1 cut(s)	273
Bsp143I	GATC	4 cut(s)	185, 481, 699, 792
BspACI	CCGC	3 cut(s)	254, 372, 758
BspCNI	CTCAG	2 cut(s)	102, 394
BspDI	ATCGAT	2 cut(s)	150, 702
BspLI	GGNNCC	2 cut(s)	50, 187
BspMAI	CTGCAG	2 cut(s)	343, 551
BspPI	GGATC	4 cut(s)	180, 193, 707, 800
BspQI	GCTCTTC	1 cut(s)	702
BspTNI	GGTCTC	1 cut(s)	44
BsrDI	GCAATG	1 cut(s)	719
BsrGI	TGTACA	1 cut(s)	273
BsrI	ACTGG	1 cut(s)	746
BssMI	GATC	4 cut(s)	185, 481, 699, 792
BssNI	GRCGYC	2 cut(s)	606, 876
Bst2UI	CCWGG	1 cut(s)	369
Bst4CI	ACNGT	2 cut(s)	772, 829
Bst6I	CTCTTC	2 cut(s)	252, 702
BstACI	GRCGYC	2 cut(s)	606, 876
BstAPI	GCANNNNNTGC	1 cut(s)	359
BstAUI	TGTACA	1 cut(s)	273
BstC8I	GCNNGC	1 cut(s)	436
BstDEI	CTNAG	4 cut(s)	89, 402, 542, 841
BstF5I	GGATG	4 cut(s)	217, 565, 609, 784
BstKTI	GATC	4 cut(s)	188, 484, 702, 795
BstMAI	GTCTC	2 cut(s)	44, 100
BstMBI	GATC	4 cut(s)	185, 481, 699, 792
BstMWI	GCNNNNNNNGC	3 cut(s)	350, 359, 895
BstNI	CCWGG	1 cut(s)	369
BstNSI	RCATGY	1 cut(s)	362
BstSCI	CCNGG	1 cut(s)	367
BstSFI	CTRYAG	2 cut(s)	339, 547
BstV1I	GCAGC	4 cut(s)	325, 353, 533, 910
BstX2I	RGATCY	1 cut(s)	185
BstYI	RGATCY	1 cut(s)	185
Bsu15I	ATCGAT	2 cut(s)	150, 702
BsuTUI	ATCGAT	2 cut(s)	150, 702
BtrI	CACGTC	1 cut(s)	815
BtsCI	GGATG	4 cut(s)	217, 565, 609, 784
BtsIMutI	CAGTG	1 cut(s)	834
Cac8I	GCNNGC	1 cut(s)	436
Cfr13I	GGNCC	1 cut(s)	538
ClaI	ATCGAT	2 cut(s)	150, 702
CseI	GACGC	1 cut(s)	809
Csp6I	GTAC	1 cut(s)	274
CviAII	CATG	5 cut(s)	302, 359, 412, 440, 668
CviQI	GTAC	1 cut(s)	274
DdeI	CTNAG	4 cut(s)	89, 402, 542, 841
DpnI	GATC	4 cut(s)	187, 483, 701, 794
DpnII	GATC	4 cut(s)	185, 481, 699, 792
DraIII	CACNNNGTG	1 cut(s)	197
Eam1104I	CTCTTC	2 cut(s)	252, 702
EarI	CTCTTC	2 cut(s)	252, 702
Ecl136II	GAGCTC	2 cut(s)	15, 69
Eco24I	GRGCYC	2 cut(s)	17, 71
Eco31I	GGTCTC	1 cut(s)	44
Eco47I	GGWCC	1 cut(s)	538
Eco53kI	GAGCTC	2 cut(s)	15, 69
EcoICRI	GAGCTC	2 cut(s)	15, 69
EcoRII	CCWGG	1 cut(s)	367
EcoT38I	GRGCYC	2 cut(s)	17, 71
FaeI	CATG	5 cut(s)	305, 362, 415, 443, 671
FalI	AAGNNNNNCTT	2 cut(s)	273, 305
FaqI	GGGAC	1 cut(s)	825
FatI	CATG	5 cut(s)	301, 358, 411, 439, 667
FauI	CCCGC	1 cut(s)	751
FblI	GTMKAC	1 cut(s)	675
Fnu4HI	GCNGC	4 cut(s)	339, 342, 547, 899
FokI	GGATG	4 cut(s)	224, 572, 596, 791
FriOI	GRGCYC	2 cut(s)	17, 71
Fsp4HI	GCNGC	4 cut(s)	339, 342, 547, 899
FspBI	CTAG	1 cut(s)	695
GluI	GCNGC	4 cut(s)	339, 342, 547, 899
HgaI	GACGC	1 cut(s)	809
Hin1I	GRCGYC	2 cut(s)	606, 876
Hin1II	CATG	5 cut(s)	305, 362, 415, 443, 671
HinfI	GANTC	6 cut(s)	61, 93, 239, 393, 492, 742
Hpy166II	GTNNAC	1 cut(s)	676
Hpy188I	TCNGA	6 cut(s)	66, 92, 244, 403, 652, 741
Hpy188III	TCNNGA	3 cut(s)	52, 197, 485
Hpy8I	GTNNAC	1 cut(s)	676
Hpy99I	CGWCG	3 cut(s)	608, 881, 884
HpyAV	CCTTC	2 cut(s)	550, 677
HpyCH4III	ACNGT	2 cut(s)	772, 829
HpyCH4IV	ACGT	4 cut(s)	606, 678, 814, 876
HpyCH4V	TGCA	7 cut(s)	147, 266, 341, 379, 411, 549, 667
HpyF10VI	GCNNNNNNNGC	3 cut(s)	350, 359, 895
HpyF3I	CTNAG	4 cut(s)	89, 402, 542, 841
HpySE526I	ACGT	4 cut(s)	606, 678, 814, 876
Hsp92I	GRCGYC	2 cut(s)	606, 876
Hsp92II	CATG	5 cut(s)	305, 362, 415, 443, 671
Kzo9I	GATC	4 cut(s)	185, 481, 699, 792
LguI	GCTCTTC	1 cut(s)	702
LmnI	GCTCC	4 cut(s)	20, 317, 350, 431
LpnPI	CCDG	6 cut(s)	65, 354, 381, 647, 759, 789
Lsp1109I	GCAGC	4 cut(s)	325, 353, 533, 910
LweI	GCATC	3 cut(s)	94, 156, 898
MaeI	CTAG	1 cut(s)	695
MaeII	ACGT	4 cut(s)	606, 678, 814, 876
MaeIII	GTNAC	7 cut(s)	197, 226, 448, 577, 748, 766, 823
MalI	GATC	4 cut(s)	187, 483, 701, 794
MboI	GATC	4 cut(s)	185, 481, 699, 792
MboII	GAAGA	7 cut(s)	67, 70, 269, 293, 576, 719, 854
MfeI	CAATTG	1 cut(s)	573
MflI	RGATCY	1 cut(s)	185
MhlI	GDGCHC	2 cut(s)	17, 71
MluCI	AATT	6 cut(s)	20, 134, 232, 397, 406, 573
MlyI	GAGTC	2 cut(s)	102, 486
MmeI	TCCRAC	2 cut(s)	163, 364
MnlI	CCTC	8 cut(s)	102, 202, 380, 418, 421, 635, 755, 783
MroXI	GAANNNNTTC	1 cut(s)	397
MseI	TTAA	2 cut(s)	329, 465
MspR9I	CCNGG	1 cut(s)	369
MunI	CAATTG	1 cut(s)	573
MvaI	CCWGG	1 cut(s)	369
MwoI	GCNNNNNNNGC	3 cut(s)	350, 359, 895
NdeII	GATC	4 cut(s)	185, 481, 699, 792
NlaIII	CATG	5 cut(s)	305, 362, 415, 443, 671
NlaIV	GGNNCC	2 cut(s)	50, 187
NmuCI	GTSAC	3 cut(s)	197, 448, 766
NspI	RCATGY	1 cut(s)	362
PciSI	GCTCTTC	1 cut(s)	702
PdmI	GAANNNNTTC	1 cut(s)	397
PfeI	GAWTC	4 cut(s)	61, 239, 393, 742
PflFI	GACNNNGTC	1 cut(s)	878
PkrI	GCNGC	4 cut(s)	340, 343, 548, 900
PleI	GAGTC	2 cut(s)	101, 486
PpsI	GAGTC	2 cut(s)	101, 486
Psp124BI	GAGCTC	2 cut(s)	17, 71
Psp6I	CCWGG	1 cut(s)	367
PspGI	CCWGG	1 cut(s)	367
PspN4I	GGNNCC	2 cut(s)	50, 187
PspPI	GGNCC	1 cut(s)	538
PstI	CTGCAG	2 cut(s)	343, 551
PsuI	RGATCY	1 cut(s)	185
PsyI	GACNNNGTC	1 cut(s)	878
RsaI	GTAC	1 cut(s)	275
RsaNI	GTAC	1 cut(s)	274
SacI	GAGCTC	2 cut(s)	17, 71
SapI	GCTCTTC	1 cut(s)	702
SaqAI	TTAA	2 cut(s)	329, 465
SatI	GCNGC	4 cut(s)	339, 342, 547, 899
Sau3AI	GATC	4 cut(s)	185, 481, 699, 792
Sau96I	GGNCC	1 cut(s)	538
SchI	GAGTC	2 cut(s)	102, 486
ScrFI	CCNGG	1 cut(s)	369
SduI	GDGCHC	2 cut(s)	17, 71
SfaNI	GCATC	3 cut(s)	94, 156, 898
SfcI	CTRYAG	2 cut(s)	339, 547
SinI	GGWCC	1 cut(s)	538
Sse9I	AATT	6 cut(s)	20, 134, 232, 397, 406, 573
SsiI	CCGC	3 cut(s)	254, 372, 758
SspMI	CTAG	1 cut(s)	695
SstI	GAGCTC	2 cut(s)	17, 71
StyD4I	CCNGG	1 cut(s)	367
TaaI	ACNGT	2 cut(s)	772, 829
TaiI	ACGT	4 cut(s)	609, 681, 817, 879
TaqI	TCGA	3 cut(s)	107, 150, 702
TasI	AATT	6 cut(s)	20, 134, 232, 397, 406, 573
TatI	WGTACW	1 cut(s)	273
TfiI	GAWTC	4 cut(s)	61, 239, 393, 742
Tru1I	TTAA	2 cut(s)	329, 465
Tru9I	TTAA	2 cut(s)	329, 465
TscAI	CASTG	1 cut(s)	834
TseFI	GTSAC	3 cut(s)	197, 448, 766
TseI	GCWGC	4 cut(s)	338, 341, 546, 898
Tsp45I	GTSAC	3 cut(s)	197, 448, 766
TspDTI	ATGAA	3 cut(s)	67, 146, 720
TspGWI	ACGGA	2 cut(s)	128, 132
TspRI	CASTG	1 cut(s)	834
Tth111I	GACNNNGTC	1 cut(s)	878
VpaK11BI	GGWCC	1 cut(s)	538
XapI	RAATTY	1 cut(s)	232
XceI	RCATGY	1 cut(s)	362
XmiI	GTMKAC	1 cut(s)	675
XmnI	GAANNNNTTC	1 cut(s)	397
XspI	CTAG	1 cut(s)	695
ZraI	GACGTC	2 cut(s)	607, 877

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.