pycom14g02230

Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
1710275 .. 1711918
1644 bp
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UTR
Exon/CDS
Intron
pycom14g02230.3

Sequence Viewer

Length: 276 bp
ATGCAGACGAATTTCTGGTACATGGTGTTGATGTTGAAGGGAAAAAGTAAGCTGGGAATAGATGAGGAGCTTGTGGTGTTGCTTGGAGAGTATTCACCGATTCCTGTAACTTATGCTGGTGGTGTGACTGTAATGGCTGATTTAGAGAGGATAAAAGTGGCAGGACGGGGACATGTAGATGCAACTGTTGGCAGTGCTTTGGATGCTTTTGGAGGCAACTTGTCATATAAGGACGTCGTTGCTTGGCATGCCCAGCAGGAGGCCTTGACTGTTTAG

Protein Analysis

92

Amino Acids

9.84

Weight (kDa)

5.13

Isoelectric Point (pI)

19.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 237
AcsI RAATTY 1 cut(s) 10
AcyI GRCGYC 1 cut(s) 234
AfaI GTAC 1 cut(s) 20
AfiI CCNNNNNNNGG 1 cut(s) 259
AflIII ACRYGT 1 cut(s) 172
AgsI TTSAA 1 cut(s) 37
AluBI AGCT 2 cut(s) 52, 70
AluI AGCT 2 cut(s) 52, 70
AoxI GGCC 1 cut(s) 261
ApoI RAATTY 1 cut(s) 10
AsuHPI GGTGA 1 cut(s) 87
BmsI GCATC 2 cut(s) 169, 193
BsaHI GRCGYC 1 cut(s) 234
Bsc4I CCNNNNNNNGG 1 cut(s) 259
BseGI GGATG 1 cut(s) 208
BseLI CCNNNNNNNGG 1 cut(s) 259
BseRI GAGGAG 1 cut(s) 80
BseYI CCCAGC 2 cut(s) 52, 252
BshFI GGCC 1 cut(s) 263
BslFI GGGAC 1 cut(s) 183
BslI CCNNNNNNNGG 1 cut(s) 259
BsmFI GGGAC 1 cut(s) 183
BsnI GGCC 1 cut(s) 263
BspANI GGCC 1 cut(s) 263
BssNI GRCGYC 1 cut(s) 234
Bst4CI ACNGT 3 cut(s) 130, 187, 271
BstACI GRCGYC 1 cut(s) 234
BstC8I GCNNGC 1 cut(s) 249
BstF5I GGATG 1 cut(s) 208
BstMWI GCNNNNNNNGC 3 cut(s) 203, 248, 253
BstNSI RCATGY 2 cut(s) 176, 251
BsuRI GGCC 1 cut(s) 263
BtsCI GGATG 1 cut(s) 208
BtsI GCAGTG 1 cut(s) 199
BtsIMutI CAGTG 1 cut(s) 199
Cac8I GCNNGC 1 cut(s) 249
Csp6I GTAC 1 cut(s) 19
CviAII CATG 3 cut(s) 22, 173, 248
CviJI RGCY 4 cut(s) 52, 70, 137, 263
CviKI_1 RGCY 4 cut(s) 52, 70, 137, 263
CviQI GTAC 1 cut(s) 19
Eco147I AGGCCT 1 cut(s) 263
FaeI CATG 3 cut(s) 25, 176, 251
FaiI YATR 6 cut(s) 23, 114, 174, 226, 228, 249
FaqI GGGAC 1 cut(s) 183
FatI CATG 3 cut(s) 21, 172, 247
FokI GGATG 1 cut(s) 215
GsaI CCCAGC 2 cut(s) 56, 256
HaeIII GGCC 1 cut(s) 263
Hin1I GRCGYC 1 cut(s) 234
Hin1II CATG 3 cut(s) 25, 176, 251
HinfI GANTC 1 cut(s) 100
HphI GGTGA 1 cut(s) 87
Hpy99I CGWCG 1 cut(s) 239
HpyAV CCTTC 1 cut(s) 31
HpyCH4III ACNGT 3 cut(s) 130, 187, 271
HpyCH4IV ACGT 1 cut(s) 234
HpyCH4V TGCA 2 cut(s) 4, 182
HpyF10VI GCNNNNNNNGC 3 cut(s) 203, 248, 253
HpySE526I ACGT 1 cut(s) 234
Hsp92I GRCGYC 1 cut(s) 234
Hsp92II CATG 3 cut(s) 25, 176, 251
LmnI GCTCC 1 cut(s) 67
LpnPI CCDG 6 cut(s) 38, 102, 117, 147, 242, 266
LweI GCATC 2 cut(s) 169, 193
MaeII ACGT 1 cut(s) 234
MaeIII GTNAC 2 cut(s) 106, 124
MluCI AATT 1 cut(s) 10
MnlI CCTC 4 cut(s) 58, 141, 206, 253
MslI CAYNNNNRTG 1 cut(s) 177
MwoI GCNNNNNNNGC 3 cut(s) 203, 248, 253
NlaIII CATG 3 cut(s) 25, 176, 251
NmuCI GTSAC 1 cut(s) 124
NspI RCATGY 2 cut(s) 176, 251
PaeI GCATGC 1 cut(s) 251
PceI AGGCCT 1 cut(s) 263
PciI ACATGT 1 cut(s) 172
PfeI GAWTC 1 cut(s) 100
PscI ACATGT 1 cut(s) 172
PspFI CCCAGC 2 cut(s) 52, 252
RsaI GTAC 1 cut(s) 20
RsaNI GTAC 1 cut(s) 19
RseI CAYNNNNRTG 1 cut(s) 177
SetI ASST 3 cut(s) 54, 72, 237
SfaNI GCATC 2 cut(s) 169, 193
SmiMI CAYNNNNRTG 1 cut(s) 177
SphI GCATGC 1 cut(s) 251
Sse9I AATT 1 cut(s) 10
SseBI AGGCCT 1 cut(s) 263
StuI AGGCCT 1 cut(s) 263
TaaI ACNGT 3 cut(s) 130, 187, 271
TaiI ACGT 1 cut(s) 237
TasI AATT 1 cut(s) 10
TfiI GAWTC 1 cut(s) 100
TscAI CASTG 1 cut(s) 199
TseFI GTSAC 1 cut(s) 124
Tsp45I GTSAC 1 cut(s) 124
TspRI CASTG 1 cut(s) 199
XapI RAATTY 1 cut(s) 10
XceI RCATGY 2 cut(s) 176, 251
ZraI GACGTC 1 cut(s) 235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.