Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0000857

Physical Location & Seq

Genomic Coordinates Reverse (-)

13761940 .. 13765196

Gene Structure 3257 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G109700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 945 bp

ATGAGAGCTGAGAGCTTCAATGCCGCTTTCTCCTCTGGTGTCCGTACAATTCAAAGGCCTCTGAGCTCTTCAATTTTCGGCGTAACGAAGCCTAAACTTATCGCTGCTACGCCTTCTAAAAGCTCCAGATTTACTCGGATTTCAATACGCTGCGCGGTTCATTTTCGACCTTGCATTGATATACACAAGGGGAAAGTGAAACAAATTGTTGGGTCTACCCTTTCGGATTCGAAGGAGGATGGGTCTGCTCTTGTTACCAATTTTGTGTCAGATAAGTCAGCGGCGGAGTATGCAAAGATGTATAAGGAAGACGGCCTTACAGGTGGTCATGTGATCATGCTTGGAGCTGACCCTTTGAGCAGAGCTGCAGCCATTGAAGCTCTGCATGCCTATCCTGGTGGTTTGCAAGTTGGAGGTGGGATCAATTCAGATAATTCTTTGCGTTACATAGAAGAAGGGGCTAGCCATGTCATTGTCACCTCATATGTATTCAACAATGGGAAAATGGACCTTGAAAGGCTCAAAGACCTTGTTTCTGTTGTTGGAAAAGAGAGGCTTGTTTTAGACCTTAGCTGCAGAAAGAGGGAAGGCAAATATGCAATTGTTACAGATAGATGGCAGAAGTTCAGTGACGTGTATCTTGATGAGGAAATATTGGACTTTCTTGCCAACTATGCAGACGAATTTCTAGTTCATGGTGTTGATGTTGAAGGGAAAAAGCTGGGCATTGACGAAGAGCTTGTGGCGTTGCTTGGAAAGCATTCACCGATTCCTGTAACTTATGCTGGTGGCGTCACTGGAATGGGTGATTTAGAGAGGATAAAAGTGGCGGGGCTGGGACATGTGGATGTTACTGTTGGCAGCGCTTTGGATGTCTTTGGGGGCAACTTGTCATACAAACATGTAGTTGCTTGGCATGCCCAGCAGGAGGCCTTGACTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000105 GO:0000162 GO:0003674 GO:0003824 GO:0003949 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006547 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016853 GO:0016860 GO:0016861 GO:0018130 GO:0019438 GO:0019752 GO:0034641 GO:0042401 GO:0042430 GO:0042435 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0052803 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00340 ko01100 ko01110 ko01230 map00340 map01100 map01110 map01230

Pfam Domains

Protein Families

His_biosynth

Protein Analysis

315

Amino Acids

33.94

Weight (kDa)

6.56

Isoelectric Point (pI)

29.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000857)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36230
fragaria_vesca	FvH4_6g18790 FvH4_6g18790 FvH4_6g18790 FvH4_6g18790 FvH4_6g18790 FvH4_6g18790
malus_domestica	MD12G1036500.v1.1 MD14G1023300.v1.1
prunus_persica	Prupe.7G109700_v2.0.a1 Prupe.7G109700_v2.0.a1 Prupe.7G109700_v2.0.a1 Prupe.7G109700_v2.0.a1 Prupe.7G109700_v2.0.a1 Prupe.7G109700_v2.0.a1
pyrus_communis	pycom12g02400 pycom14g02220 pycom14g02230
rosa_chinensis	RchiOBHm_Chr1g0324901 RchiOBHm_Chr1g0350151 RchiOBHm_Chr3g0473801 RchiOBHm_Chr4g0393091 RchiOBHm_Chr4g0409701 RchiOBHm_Chr5g0027171
rosa_laevigata	RLG00000014193 RLG00000023983 RLG00000035737
rosa_multiflora	Rmu_sc0001207.1_g000028 Rmu_sc0002986.1_g000013 Rmu_sc0007035.1_g000005 Rmu_sc0016122.1_g000001 Rmu_sc0037919.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029230 Rroxscaffold_1G00029310 Rroxscaffold_2G00114250 Rroxscaffold_3G00260930 Rroxscaffold_3G00260940 Rroxscaffold_4G00311820 Rroxscaffold_4G00332560 Rroxscaffold_5G00338520 Rroxscaffold_5G00355640 Rroxscaffold_6G00407790
rosa_rugosa	Rorug01G0107500 Rorug02G0045900 Rorug03G0135600 Rorug06G0225600 Rorug07G0319400 Rorug07G0330900
rosa_samantha	Rh1AG080400 Rh1AG119900 Rh1AG120000 Rh1AG233100 Rh1CG115000 Rh1CG217700 Rh2BG241500 Rh2BG353000 Rh2DG556200 Rh3AG186100 Rh3AG202300 Rh3BG214400 Rh3CG211200 Rh3DG210400 Rh3DG227900 Rh5AG343700 Rh5DG191000
rosa_wichuraiana	Rw1G018100 Rw3G017000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	215
AccII	CGCG	1 cut(s)	155
AciI	CCGC	5 cut(s)	24, 155, 281, 284, 830
AclWI	GGATC	1 cut(s)	428
AcsI	RAATTY	1 cut(s)	683
AcyI	GRCGYC	1 cut(s)	792
AfaI	GTAC	1 cut(s)	46
AfeI	AGCGCT	1 cut(s)	865
AfiI	CCNNNNNNNGG	1 cut(s)	928
AflIII	ACRYGT	3 cut(s)	633, 841, 901
AgsI	TTSAA	8 cut(s)	19, 53, 72, 144, 377, 493, 515, 710
AjiI	CACGTC	1 cut(s)	634
AjnI	CCWGG	1 cut(s)	394
Alw21I	GWGCWC	1 cut(s)	68
AlwI	GGATC	1 cut(s)	428
Aor51HI	AGCGCT	1 cut(s)	865
AoxI	GGCC	3 cut(s)	56, 313, 930
ApeKI	GCWGC	6 cut(s)	104, 150, 365, 368, 573, 861
ApoI	RAATTY	1 cut(s)	683
Asp700I	GAANNNNTTC	1 cut(s)	760
AspLEI	GCGC	2 cut(s)	155, 866
AspS9I	GGNCC	1 cut(s)	508
AsuHPI	GGTGA	3 cut(s)	469, 756, 818
AsuII	TTCGAA	1 cut(s)	230
AsuNHI	GCTAGC	1 cut(s)	461
AvaII	GGWCC	1 cut(s)	508
BanII	GRGCYC	1 cut(s)	68
BbsI	GAAGAC	1 cut(s)	315
Bbv12I	GWGCWC	1 cut(s)	68
BbvI	GCAGC	6 cut(s)	91, 137, 352, 380, 560, 873
BccI	CCATC	2 cut(s)	233, 609
BceAI	ACGGC	1 cut(s)	328
BciT130I	CCWGG	1 cut(s)	396
BclI	TGATCA	1 cut(s)	333
BfaI	CTAG	2 cut(s)	462, 689
BfmI	CTRYAG	2 cut(s)	366, 574
BfoI	RGCGCY	1 cut(s)	867
BisI	GCNGC	8 cut(s)	24, 105, 151, 282, 366, 369, 574, 862
BlsI	GCNGC	8 cut(s)	25, 106, 152, 283, 367, 370, 575, 863
Bme1390I	CCNGG	1 cut(s)	396
Bme18I	GGWCC	1 cut(s)	508
BmgBI	CACGTC	1 cut(s)	634
BmgT120I	GGNCC	1 cut(s)	508
BmrFI	CCNGG	1 cut(s)	396
BmtI	GCTAGC	1 cut(s)	465
BpiI	GAAGAC	1 cut(s)	315
BpmI	CTGGAG	1 cut(s)	109
Bpu10I	CCTNAGC	1 cut(s)	569
Bpu14I	TTCGAA	1 cut(s)	230
BsaHI	GRCGYC	1 cut(s)	792
BsaXI	ACNNNNNCTCC	2 cut(s)	227, 257
Bsc4I	CCNNNNNNNGG	1 cut(s)	928
Bse1I	ACTGG	1 cut(s)	802
BseBI	CCWGG	1 cut(s)	396
BseGI	GGATG	3 cut(s)	244, 853, 877
BseLI	CCNNNNNNNGG	1 cut(s)	928
BseMII	CTCAG	1 cut(s)	53
BseNI	ACTGG	1 cut(s)	802
BseRI	GAGGAG	1 cut(s)	22
BseXI	GCAGC	6 cut(s)	91, 137, 352, 380, 560, 873
BseYI	CCCAGC	3 cut(s)	721, 835, 921
Bsh1236I	CGCG	1 cut(s)	155
BshFI	GGCC	3 cut(s)	58, 315, 932
BsiHKAI	GWGCWC	1 cut(s)	68
BslFI	GGGAC	1 cut(s)	852
BslI	CCNNNNNNNGG	1 cut(s)	928
BsmFI	GGGAC	1 cut(s)	852
BsmI	GAATGC	1 cut(s)	760
BsnI	GGCC	3 cut(s)	58, 315, 932
Bsp119I	TTCGAA	1 cut(s)	230
Bsp1286I	GDGCHC	1 cut(s)	68
Bsp143I	GATC	2 cut(s)	333, 420
BspACI	CCGC	5 cut(s)	24, 155, 281, 284, 830
BspANI	GGCC	3 cut(s)	58, 315, 932
BspCNI	CTCAG	1 cut(s)	54
BspFNI	CGCG	1 cut(s)	155
BspMAI	CTGCAG	2 cut(s)	370, 578
BspOI	GCTAGC	1 cut(s)	465
BspPI	GGATC	1 cut(s)	428
BspQI	GCTCTTC	2 cut(s)	73, 729
BspT104I	TTCGAA	1 cut(s)	230
BsrI	ACTGG	1 cut(s)	802
BssMI	GATC	2 cut(s)	333, 420
BssNI	GRCGYC	1 cut(s)	792
Bst2UI	CCWGG	1 cut(s)	396
Bst4CI	ACNGT	2 cut(s)	856, 940
Bst6I	CTCTTC	2 cut(s)	73, 729
BstACI	GRCGYC	1 cut(s)	792
BstBI	TTCGAA	1 cut(s)	230
BstC8I	GCNNGC	3 cut(s)	387, 463, 918
BstDEI	CTNAG	3 cut(s)	9, 62, 569
BstF5I	GGATG	3 cut(s)	244, 853, 877
BstFNI	CGCG	1 cut(s)	155
BstH2I	RGCGCY	1 cut(s)	867
BstHHI	GCGC	2 cut(s)	155, 866
BstKTI	GATC	2 cut(s)	336, 423
BstMBI	GATC	2 cut(s)	333, 420
BstMWI	GCNNNNNNNGC	7 cut(s)	290, 377, 386, 674, 757, 917, 922
BstNI	CCWGG	1 cut(s)	396
BstNSI	RCATGY	4 cut(s)	389, 845, 905, 920
BstSCI	CCNGG	1 cut(s)	394
BstSFI	CTRYAG	2 cut(s)	366, 574
BstUI	CGCG	1 cut(s)	155
BstV1I	GCAGC	6 cut(s)	91, 137, 352, 380, 560, 873
BstV2I	GAAGAC	1 cut(s)	315
BsuRI	GGCC	3 cut(s)	58, 315, 932
BtrI	CACGTC	1 cut(s)	634
BtsCI	GGATG	3 cut(s)	244, 853, 877
BtsIMutI	CAGTG	2 cut(s)	634, 795
Cac8I	GCNNGC	3 cut(s)	387, 463, 918
CfoI	GCGC	2 cut(s)	155, 866
Cfr13I	GGNCC	1 cut(s)	508
CseI	GACGC	1 cut(s)	781
Csp6I	GTAC	1 cut(s)	45
CviAII	CATG	8 cut(s)	329, 337, 386, 467, 695, 842, 902, 917
CviQI	GTAC	1 cut(s)	45
DdeI	CTNAG	3 cut(s)	9, 62, 569
DpnI	GATC	2 cut(s)	335, 422
DpnII	GATC	2 cut(s)	333, 420
Eam1104I	CTCTTC	2 cut(s)	73, 729
EarI	CTCTTC	2 cut(s)	73, 729
EciI	GGCGGA	1 cut(s)	299
Ecl136II	GAGCTC	1 cut(s)	66
Eco147I	AGGCCT	2 cut(s)	58, 932
Eco24I	GRGCYC	1 cut(s)	68
Eco47I	GGWCC	1 cut(s)	508
Eco47III	AGCGCT	1 cut(s)	865
Eco53kI	GAGCTC	1 cut(s)	66
EcoICRI	GAGCTC	1 cut(s)	66
EcoRII	CCWGG	1 cut(s)	394
EcoT38I	GRGCYC	1 cut(s)	68
FaeI	CATG	8 cut(s)	332, 340, 389, 470, 698, 845, 905, 920
FalI	AAGNNNNNCTT	4 cut(s)	300, 332, 540, 572
FaqI	GGGAC	1 cut(s)	852
FatI	CATG	8 cut(s)	328, 336, 385, 466, 694, 841, 901, 916
FauI	CCCGC	1 cut(s)	823
FauNDI	CATATG	1 cut(s)	484
FbaI	TGATCA	1 cut(s)	333
FblI	GTMKAC	1 cut(s)	215
Fnu4HI	GCNGC	8 cut(s)	24, 105, 151, 282, 366, 369, 574, 862
FokI	GGATG	3 cut(s)	251, 860, 884
FriOI	GRGCYC	1 cut(s)	68
Fsp4HI	GCNGC	8 cut(s)	24, 105, 151, 282, 366, 369, 574, 862
FspBI	CTAG	2 cut(s)	462, 689
GlaI	GCGC	2 cut(s)	154, 865
GluI	GCNGC	8 cut(s)	24, 105, 151, 282, 366, 369, 574, 862
GsaI	CCCAGC	3 cut(s)	725, 839, 925
GsuI	CTGGAG	1 cut(s)	109
HaeII	RGCGCY	1 cut(s)	867
HaeIII	GGCC	3 cut(s)	58, 315, 932
HgaI	GACGC	1 cut(s)	781
HhaI	GCGC	2 cut(s)	155, 866
Hin1I	GRCGYC	1 cut(s)	792
Hin1II	CATG	8 cut(s)	332, 340, 389, 470, 698, 845, 905, 920
Hin6I	GCGC	2 cut(s)	153, 864
HinP1I	GCGC	2 cut(s)	153, 864
HinfI	GANTC	2 cut(s)	227, 769
HphI	GGTGA	3 cut(s)	469, 756, 818
Hpy166II	GTNNAC	1 cut(s)	216
Hpy188I	TCNGA	5 cut(s)	63, 138, 226, 271, 430
Hpy188III	TCNNGA	2 cut(s)	126, 641
Hpy8I	GTNNAC	1 cut(s)	216
HpyAV	CCTTC	5 cut(s)	123, 226, 449, 581, 704
HpyCH4III	ACNGT	2 cut(s)	856, 940
HpyCH4IV	ACGT	1 cut(s)	633
HpyCH4V	TGCA	8 cut(s)	174, 293, 368, 385, 406, 576, 599, 677
HpyF10VI	GCNNNNNNNGC	7 cut(s)	290, 377, 386, 674, 757, 917, 922
HpyF3I	CTNAG	3 cut(s)	9, 62, 569
HpySE526I	ACGT	1 cut(s)	633
Hsp92I	GRCGYC	1 cut(s)	792
Hsp92II	CATG	8 cut(s)	332, 340, 389, 470, 698, 845, 905, 920
HspAI	GCGC	2 cut(s)	153, 864
Ksp22I	TGATCA	1 cut(s)	333
Kzo9I	GATC	2 cut(s)	333, 420
LguI	GCTCTTC	2 cut(s)	73, 729
LmnI	GCTCC	2 cut(s)	128, 344
Lsp1109I	GCAGC	6 cut(s)	91, 137, 352, 380, 560, 873
MaeI	CTAG	2 cut(s)	462, 689
MaeII	ACGT	1 cut(s)	633
MaeIII	GTNAC	9 cut(s)	82, 253, 443, 475, 604, 629, 775, 793, 850
MalI	GATC	2 cut(s)	335, 422
MboI	GATC	2 cut(s)	333, 420
MboII	GAAGA	4 cut(s)	60, 320, 464, 746
MfeI	CAATTG	1 cut(s)	600
MhlI	GDGCHC	1 cut(s)	68
MluCI	AATT	8 cut(s)	48, 72, 204, 259, 424, 433, 600, 683
MmeI	TCCRAC	2 cut(s)	391, 523
MroXI	GAANNNNTTC	1 cut(s)	760
MslI	CAYNNNNRTG	2 cut(s)	800, 846
MspA1I	CMGCKG	1 cut(s)	281
MspR9I	CCNGG	1 cut(s)	396
MunI	CAATTG	1 cut(s)	600
Mva1269I	GAATGC	1 cut(s)	760
MvaI	CCWGG	1 cut(s)	396
MvnI	CGCG	1 cut(s)	155
MwoI	GCNNNNNNNGC	7 cut(s)	290, 377, 386, 674, 757, 917, 922
NdeI	CATATG	1 cut(s)	484
NdeII	GATC	2 cut(s)	333, 420
NheI	GCTAGC	1 cut(s)	461
NlaIII	CATG	8 cut(s)	332, 340, 389, 470, 698, 845, 905, 920
NmuCI	GTSAC	3 cut(s)	475, 629, 793
NspI	RCATGY	4 cut(s)	389, 845, 905, 920
NspV	TTCGAA	1 cut(s)	230
PaeI	GCATGC	2 cut(s)	389, 920
PceI	AGGCCT	2 cut(s)	58, 932
PciI	ACATGT	2 cut(s)	841, 901
PciSI	GCTCTTC	2 cut(s)	73, 729
PctI	GAATGC	1 cut(s)	760
PdmI	GAANNNNTTC	1 cut(s)	760
PfeI	GAWTC	2 cut(s)	227, 769
PkrI	GCNGC	8 cut(s)	25, 106, 152, 283, 367, 370, 575, 863
PscI	ACATGT	2 cut(s)	841, 901
Psp124BI	GAGCTC	1 cut(s)	68
Psp6I	CCWGG	1 cut(s)	394
PspFI	CCCAGC	3 cut(s)	721, 835, 921
PspGI	CCWGG	1 cut(s)	394
PspPI	GGNCC	1 cut(s)	508
PstI	CTGCAG	2 cut(s)	370, 578
RsaI	GTAC	1 cut(s)	46
RsaNI	GTAC	1 cut(s)	45
RseI	CAYNNNNRTG	2 cut(s)	800, 846
SacI	GAGCTC	1 cut(s)	68
SapI	GCTCTTC	2 cut(s)	73, 729
SatI	GCNGC	8 cut(s)	24, 105, 151, 282, 366, 369, 574, 862
Sau3AI	GATC	2 cut(s)	333, 420
Sau96I	GGNCC	1 cut(s)	508
ScrFI	CCNGG	1 cut(s)	396
SduI	GDGCHC	1 cut(s)	68
SfcI	CTRYAG	2 cut(s)	366, 574
SfuI	TTCGAA	1 cut(s)	230
SinI	GGWCC	1 cut(s)	508
SmiMI	CAYNNNNRTG	2 cut(s)	800, 846
SphI	GCATGC	2 cut(s)	389, 920
Sse9I	AATT	8 cut(s)	48, 72, 204, 259, 424, 433, 600, 683
SseBI	AGGCCT	2 cut(s)	58, 932
SsiI	CCGC	5 cut(s)	24, 155, 281, 284, 830
SspI	AATATT	1 cut(s)	654
SspMI	CTAG	2 cut(s)	462, 689
SstI	GAGCTC	1 cut(s)	68
StuI	AGGCCT	2 cut(s)	58, 932
StyD4I	CCNGG	1 cut(s)	394
TaaI	ACNGT	2 cut(s)	856, 940
TaiI	ACGT	1 cut(s)	636
TaqI	TCGA	2 cut(s)	166, 230
TasI	AATT	8 cut(s)	48, 72, 204, 259, 424, 433, 600, 683
TauI	GCSGC	2 cut(s)	26, 284
TfiI	GAWTC	2 cut(s)	227, 769
TscAI	CASTG	2 cut(s)	634, 802
TseFI	GTSAC	3 cut(s)	475, 629, 793
TseI	GCWGC	6 cut(s)	104, 150, 365, 368, 573, 861
Tsp45I	GTSAC	3 cut(s)	475, 629, 793
TspDTI	ATGAA	2 cut(s)	149, 683
TspGWI	ACGGA	1 cut(s)	32
TspRI	CASTG	2 cut(s)	634, 802
VpaK11BI	GGWCC	1 cut(s)	508
XapI	RAATTY	1 cut(s)	683
XceI	RCATGY	4 cut(s)	389, 845, 905, 920
XmiI	GTMKAC	1 cut(s)	215
XmnI	GAANNNNTTC	1 cut(s)	760
XspI	CTAG	2 cut(s)	462, 689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.