Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000820

Physical Location & Seq

Genomic Coordinates Reverse (-)

4025076 .. 4029140

Gene Structure 4065 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G12680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGGCACATCGTCAATTGTATAGCTACGCCCTTCAACCTTCTTATGCTGCTGCTGCCTCCACCGTATCTCCAGCTCCTCCTCCGCCGCAACAACCACTGCCGCCAAAAACCGGTCTTTCTTCTCTCTACGGTTCTTCTGCTGACCATTACTTTCCGGATACCACGTATCGTTTCTTAGCTCGTGATGGATCCGAAGCTTTGAGCAACTATTCAGGGACTCTTGCATCGTCTTCCTCTATGTACCATCATTTGCCTAACACGACGGCATCGCATTTGGCGTATCCTCAGCTGCTTCAGCATCAGGAAGTTGCTTGGCCACCTGGTGTGGAGGTTCCCGGTGCTGCTTCCGCCGTCGAGCCACTTCCTCCTGGTGTCAAACGCACCTCTGAAGCGCTCTACTATCCGACTCTGTTGGGTGCCCATAATACAATTGGTCAAACCGAAGCTTGGTATACTACAGACTATTTTACCAAGCGCCCTAAGTTGGAGAGTACAAGCCATTTGCCTATATATCCACAGAGGGCAGGAGAGAAAGATTGTACCCACTATATGCAAACAAGAACATGTAAATTTGGAGAAAGCTGCAGGTTTGATCATCCTATTTGGGTTCCTGAGGGCGGAATCCCAGATTGGAAAGAGGCACCAGTTGTTCCAAATGAAGAGTATCCTGAGAGACCAGGAGAACCAGATTGTCCTTACTATATAAAAACACAACGCTGCAAATATGGTTCAAAGTGCAAATTTAATCATCCAAGAGAAGAGGCTGCAGTTAGTGTTGAAACTCAAGATTCATTGCCTGAGAGGCCTTCTGAACCTATGTGCACATTCTACATGAAGACTGGAAAATGTAAATTTGGTTTGTCATGCAAATTCCACCATCCAAAGGATATCCAGCTACCATCATCGAGTCAAGATATTGGTAGCAGTGTGGGGTTAACCAGTGAGCCTGATGCCACAAACAATCCGCATGTCACATTTACCCCAGCATTGTATCACAACTCAAAAGGACTACCTGTTAGATCGGGTGAAGTGGACTGCCCATTCTATCTCAAAACGGGAAGCTGCAAGTATGGAGCCACTTGTCGCTACAATCATCCTGAGAGGACTGCATTCATTCCCCAAGCTGCTGGGGTAAACTATTCTCTAGTTTCATCGAACACTGCGAATTTGAACCTTGGGCTGGTTACACCAGCTACCTCTTTCTATCAGACTCTTACTCAACCCACGCTTGGAGTGATTTCAGCAACTTATCCCCAAAGACCTGGACAATCAGAATGTGACTACTACATGAAGACAGGGGAGTGCAAGTTTGGAGAGAGATGCAAATTCCATCACCCAGCAGATAGGTTAAGTGCAATGACCAAACAAGCTCCTCAACAACCAAATGTAAAGCTGAGTCTTGCAGGGTATCCCAGAAGAGAGGGTGCGCTTAATTGCCCTTATTACATGAAGACAGGAACTTGCAAATACGGGGCAACATGCAAGTTTGACCATCCTCCTCCAGGTGAGGTGATGGCTAAGACCACTTCAGAAGCCGATGCTGCTGGAGCAACCAACACCGACACTACTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001709 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006417 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032502 GO:0034248 GO:0034249 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0044424 GO:0044444 GO:0044464 GO:0045165 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048869 GO:0050779 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:1901363 GO:1903311 GO:1903313 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

524

Amino Acids

57.65

Weight (kDa)

7.52

Isoelectric Point (pI)

55.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH	PF00642	177 - 200	3.4e-08	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	226 - 252	1.8e-07	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	274 - 295	8.5e-09	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	342 - 367	4e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH_DUS3L	PF25585	344 - 365	1.3e-06	DUS3L CCCH zinc finger domain
zf-CCCH	PF00642	422 - 446	9.9e-11	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	478 - 500	1e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf_CCCH_4	PF18345	479 - 498	1.7e-06	Zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12680
fragaria_vesca	FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640
malus_domestica	MD03G1280400.v1.1 MD06G1158700.v1.1 MD06G1158900.v1.1 MD06G1159100.v1.1 MD10G1219700.v1.1
prunus_persica	Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.7G013500_v2.0.a1 Prupe.8G067100_v2.0.a1
pyrus_communis	pycom06g14160 pycom06g14170 pycom10g18590
rosa_chinensis	RchiOBHm_Chr5g0022551 RchiOBHm_Chr5g0022581 RchiOBHm_Chr5g0022611 RchiOBHm_Chr5g0022711 RchiOBHm_Chr5g0022731 RchiOBHm_Chr5g0022751 RchiOBHm_Chr5g0022761 RchiOBHm_Chr5g0022841 RchiOBHm_Chr5g0022861 RchiOBHm_Chr5g0022911
rosa_laevigata	RLG00000032672 RLG00000032674 RLG00000032675 RLG00000032677 RLG00000032679 RLG00000035293
rosa_multiflora	Rmu_sc0000401.1_g000006 Rmu_sc0000401.1_g000007 Rmu_sc0000401.1_g000014 Rmu_sc0000401.1_g000026 Rmu_sc0000401.1_g000028 Rmu_sc0010181.1_g000001 Rmu_sc0010181.1_g000004 Rmu_sc0010181.1_g000009 Rmu_sc0042157.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056450 Rroxscaffold_1G00056490
rosa_rugosa	Rorug05G0075100
rosa_samantha	Rh5AG161600 Rh5BG099400 Rh5BG160400 Rh5BG160700 Rh5CG175100 Rh5DG161100 Rh5DG161300 Rh5DG161500 Rh5DG161600 Rh5DG161700 Rh5DG161900 Rh5DG162000 Rh5DG162400
rosa_wichuraiana	Rw5G014410 Rw5G014450 Rw5G014490 Rw5G014510 Rw5G014540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	576
AccB1I	GGYRCC	2 cut(s)	416, 640
AccI	GTMKAC	1 cut(s)	452
AccIII	TCCGGA	1 cut(s)	154
AciI	CCGC	6 cut(s)	83, 86, 101, 348, 618, 965
AclWI	GGATC	2 cut(s)	183, 196
AcoI	YGGCCR	1 cut(s)	314
AcsI	RAATTY	6 cut(s)	569, 740, 851, 869, 1165, 1325
AcuI	CTGAAG	3 cut(s)	278, 408, 1512
AdeI	CACNNNGTG	1 cut(s)	323
AfaI	GTAC	3 cut(s)	242, 493, 541
AfeI	AGCGCT	1 cut(s)	393
AfiI	CCNNNNNNNGG	8 cut(s)	110, 447, 484, 617, 883, 1180, 1229, 1502
AflIII	ACRYGT	1 cut(s)	563
AgeI	ACCGGT	1 cut(s)	110
AgsI	TTSAA	4 cut(s)	35, 732, 779, 1171
AjnI	CCWGG	5 cut(s)	319, 367, 676, 1261, 1501
AjuI	GAANNNNNNNTTGG	2 cut(s)	613, 645
Alw21I	GWGCWC	1 cut(s)	824
Alw26I	GTCTC	1 cut(s)	667
Alw44I	GTGCAC	1 cut(s)	820
AlwI	GGATC	2 cut(s)	183, 196
Aor13HI	TCCGGA	1 cut(s)	154
Aor51HI	AGCGCT	1 cut(s)	393
AoxI	GGCC	2 cut(s)	314, 803
ApaLI	GTGCAC	1 cut(s)	820
ApoI	RAATTY	6 cut(s)	569, 740, 851, 869, 1165, 1325
AsiGI	ACCGGT	1 cut(s)	110
AspLEI	GCGC	3 cut(s)	394, 477, 1429
AsuC2I	CCSGG	1 cut(s)	336
AsuHPI	GGTGA	4 cut(s)	1037, 1325, 1517, 1522
AxyI	CCTNAGG	1 cut(s)	612
BaeGI	GKGCMC	2 cut(s)	421, 824
BalI	TGGCCA	1 cut(s)	316
BamHI	GGATCC	1 cut(s)	188
BanI	GGYRCC	2 cut(s)	416, 640
BauI	CACGAG	1 cut(s)	180
BbsI	GAAGAC	4 cut(s)	222, 842, 1298, 1457
Bbv12I	GWGCWC	1 cut(s)	824
BbvCI	CCTCAGC	1 cut(s)	285
BccI	CCATC	7 cut(s)	179, 252, 885, 907, 1338, 1500, 1507
BceAI	ACGGC	2 cut(s)	279, 335
BciT130I	CCWGG	5 cut(s)	321, 369, 678, 1263, 1503
BciVI	GTATCC	4 cut(s)	151, 291, 675, 1419
BclI	TGATCA	1 cut(s)	592
BcnI	CCSGG	1 cut(s)	336
BcoDI	GTCTC	1 cut(s)	667
BfaI	CTAG	1 cut(s)	1145
BfmI	CTRYAG	3 cut(s)	456, 583, 765
BfoI	RGCGCY	2 cut(s)	395, 478
BfuAI	ACCTGC	1 cut(s)	576
BfuI	GTATCC	4 cut(s)	151, 291, 675, 1419
BglI	GCCNNNNNGGC	1 cut(s)	802
Bme1390I	CCNGG	6 cut(s)	321, 336, 369, 678, 1263, 1503
BmiI	GGNNCC	6 cut(s)	190, 333, 418, 609, 642, 1075
BmrFI	CCNGG	6 cut(s)	321, 336, 369, 678, 1263, 1503
BmsI	GCATC	6 cut(s)	233, 275, 307, 940, 1310, 1528
BpiI	GAAGAC	4 cut(s)	222, 842, 1298, 1457
BpmI	CTGGAG	3 cut(s)	54, 1485, 1566
Bpu10I	CCTNAGC	1 cut(s)	285
BpuEI	CTTGAG	1 cut(s)	768
BpuMI	CCSGG	1 cut(s)	336
BsaAI	YACGTR	1 cut(s)	165
BsaI	GGTCTC	1 cut(s)	667
BsaJI	CCNNGG	1 cut(s)	1174
BsaWI	WCCGGW	2 cut(s)	110, 154
BsaXI	ACNNNNNCTCC	4 cut(s)	52, 82, 1292, 1322
Bsc4I	CCNNNNNNNGG	8 cut(s)	110, 447, 484, 617, 883, 1180, 1229, 1502
Bse118I	RCCGGY	1 cut(s)	110
Bse1I	ACTGG	3 cut(s)	644, 844, 939
Bse21I	CCTNAGG	1 cut(s)	612
Bse3DI	GCAATG	2 cut(s)	791, 1362
BseAI	TCCGGA	1 cut(s)	154
BseBI	CCWGG	5 cut(s)	321, 369, 678, 1263, 1503
BseDI	CCNNGG	1 cut(s)	1174
BseGI	GGATG	5 cut(s)	595, 748, 877, 1093, 1492
BseLI	CCNNNNNNNGG	8 cut(s)	110, 447, 484, 617, 883, 1180, 1229, 1502
BseMI	GCAATG	2 cut(s)	791, 1362
BseMII	CTCAG	6 cut(s)	299, 603, 660, 789, 1089, 1385
BseNI	ACTGG	3 cut(s)	644, 844, 939
BseRI	GAGGAG	4 cut(s)	66, 69, 1362, 1488
BseSI	GKGCMC	2 cut(s)	421, 824
BseYI	CCCAGC	3 cut(s)	982, 1127, 1336
BshFI	GGCC	2 cut(s)	316, 805
BshNI	GGYRCC	2 cut(s)	416, 640
BshTI	ACCGGT	1 cut(s)	110
BsiHKAI	GWGCWC	1 cut(s)	824
BsiSI	CCGG	3 cut(s)	111, 155, 336
BslFI	GGGAC	1 cut(s)	229
BslI	CCNNNNNNNGG	8 cut(s)	110, 447, 484, 617, 883, 1180, 1229, 1502
BsmAI	GTCTC	1 cut(s)	667
BsmFI	GGGAC	1 cut(s)	229
BsmI	GAATGC	1 cut(s)	1109
BsnI	GGCC	2 cut(s)	316, 805
Bso31I	GGTCTC	1 cut(s)	667
Bsp1286I	GDGCHC	2 cut(s)	421, 824
Bsp13I	TCCGGA	1 cut(s)	154
Bsp143I	GATC	3 cut(s)	188, 592, 1019
BspACI	CCGC	6 cut(s)	83, 86, 101, 348, 618, 965
BspANI	GGCC	2 cut(s)	316, 805
BspCNI	CTCAG	6 cut(s)	298, 604, 661, 790, 1090, 1386
BspEI	TCCGGA	1 cut(s)	154
BspLI	GGNNCC	6 cut(s)	190, 333, 418, 609, 642, 1075
BspMAI	CTGCAG	2 cut(s)	587, 769
BspMI	ACCTGC	1 cut(s)	576
BspPI	GGATC	2 cut(s)	183, 196
BspT107I	GGYRCC	2 cut(s)	416, 640
BspTNI	GGTCTC	1 cut(s)	667
BsrDI	GCAATG	2 cut(s)	791, 1362
BsrFI	RCCGGY	1 cut(s)	110
BsrI	ACTGG	3 cut(s)	644, 844, 939
BssAI	RCCGGY	1 cut(s)	110
BssECI	CCNNGG	1 cut(s)	1174
BssMI	GATC	3 cut(s)	188, 592, 1019
BssNAI	GTATAC	1 cut(s)	453
BssSI	CACGAG	1 cut(s)	180
BssT1I	CCWWGG	1 cut(s)	1174
Bst1107I	GTATAC	1 cut(s)	453
Bst2BI	CACGAG	1 cut(s)	180
Bst2UI	CCWGG	5 cut(s)	321, 369, 678, 1263, 1503
Bst4CI	ACNGT	2 cut(s)	64, 131
Bst6I	CTCTTC	3 cut(s)	654, 753, 1411
BstBAI	YACGTR	1 cut(s)	165
BstDEI	CTNAG	9 cut(s)	175, 285, 480, 612, 669, 798, 1098, 1394, 1518
BstENI	CCTNNNNNAGG	1 cut(s)	1500
BstF5I	GGATG	5 cut(s)	595, 748, 877, 1093, 1492
BstH2I	RGCGCY	2 cut(s)	395, 478
BstHHI	GCGC	3 cut(s)	394, 477, 1429
BstKTI	GATC	3 cut(s)	191, 595, 1022
BstMAI	GTCTC	1 cut(s)	667
BstMBI	GATC	3 cut(s)	188, 592, 1019
BstMWI	GCNNNNNNNGC	6 cut(s)	53, 295, 347, 802, 1541, 1547
BstNI	CCWGG	5 cut(s)	321, 369, 678, 1263, 1503
BstNSI	RCATGY	3 cut(s)	567, 971, 1482
BstSCI	CCNGG	6 cut(s)	319, 334, 367, 676, 1261, 1501
BstSFI	CTRYAG	3 cut(s)	456, 583, 765
BstSLI	GKGCMC	2 cut(s)	421, 824
BstV2I	GAAGAC	4 cut(s)	222, 842, 1298, 1457
BstX2I	RGATCY	1 cut(s)	188
BstXI	CCANNNNNNTGG	2 cut(s)	1127, 1262
BstYI	RGATCY	1 cut(s)	188
BstZ17I	GTATAC	1 cut(s)	453
Bsu36I	CCTNAGG	1 cut(s)	612
BsuI	GTATCC	4 cut(s)	151, 291, 675, 1419
BsuRI	GGCC	2 cut(s)	316, 805
BtgZI	GCGATG	1 cut(s)	252
BtsCI	GGATG	5 cut(s)	595, 748, 877, 1093, 1492
BtsI	GCAGTG	3 cut(s)	95, 931, 1158
BtsIMutI	CAGTG	4 cut(s)	95, 931, 946, 1158
BveI	ACCTGC	1 cut(s)	576
CfoI	GCGC	3 cut(s)	394, 477, 1429
Cfr10I	RCCGGY	1 cut(s)	110
CsiI	ACCWGGT	1 cut(s)	319
Csp6I	GTAC	3 cut(s)	241, 492, 540
CspAI	ACCGGT	1 cut(s)	110
CviAII	CATG	7 cut(s)	564, 832, 864, 968, 1288, 1447, 1479
CviQI	GTAC	3 cut(s)	241, 492, 540
DdeI	CTNAG	9 cut(s)	175, 285, 480, 612, 669, 798, 1098, 1394, 1518
DpnI	GATC	3 cut(s)	190, 594, 1021
DpnII	GATC	3 cut(s)	188, 592, 1019
DraIII	CACNNNGTG	1 cut(s)	323
EaeI	YGGCCR	1 cut(s)	314
Eam1104I	CTCTTC	3 cut(s)	654, 753, 1411
EarI	CTCTTC	3 cut(s)	654, 753, 1411
EciI	GGCGGA	3 cut(s)	72, 337, 633
Eco130I	CCWWGG	1 cut(s)	1174
Eco147I	AGGCCT	1 cut(s)	805
Eco31I	GGTCTC	1 cut(s)	667
Eco32I	GATATC	1 cut(s)	889
Eco47III	AGCGCT	1 cut(s)	393
Eco57I	CTGAAG	3 cut(s)	278, 408, 1512
Eco81I	CCTNAGG	1 cut(s)	612
EcoNI	CCTNNNNNAGG	1 cut(s)	1500
EcoRII	CCWGG	5 cut(s)	319, 367, 676, 1261, 1501
EcoRV	GATATC	1 cut(s)	889
EcoT14I	CCWWGG	1 cut(s)	1174
ErhI	CCWWGG	1 cut(s)	1174
FaeI	CATG	7 cut(s)	567, 835, 867, 971, 1291, 1450, 1482
FaqI	GGGAC	1 cut(s)	229
FatI	CATG	7 cut(s)	563, 831, 863, 967, 1287, 1446, 1478
FbaI	TGATCA	1 cut(s)	592
FblI	GTMKAC	1 cut(s)	452
FokI	GGATG	5 cut(s)	582, 735, 864, 1080, 1479
FspBI	CTAG	1 cut(s)	1145
GlaI	GCGC	3 cut(s)	393, 476, 1428
GsaI	CCCAGC	3 cut(s)	986, 1131, 1340
GsuI	CTGGAG	3 cut(s)	54, 1485, 1566
HaeII	RGCGCY	2 cut(s)	395, 478
HaeIII	GGCC	2 cut(s)	316, 805
HapII	CCGG	3 cut(s)	111, 155, 336
HhaI	GCGC	3 cut(s)	394, 477, 1429
Hin1II	CATG	7 cut(s)	567, 835, 867, 971, 1291, 1450, 1482
Hin6I	GCGC	3 cut(s)	392, 475, 1427
HinP1I	GCGC	3 cut(s)	392, 475, 1427
HincII	GTYRAC	1 cut(s)	936
HindII	GTYRAC	1 cut(s)	936
HindIII	AAGCTT	2 cut(s)	195, 444
HinfI	GANTC	7 cut(s)	217, 406, 621, 788, 907, 1210, 1396
HpaI	GTTAAC	1 cut(s)	936
HpaII	CCGG	3 cut(s)	111, 155, 336
HphI	GGTGA	4 cut(s)	1037, 1325, 1517, 1522
Hpy166II	GTNNAC	5 cut(s)	453, 822, 936, 1033, 1135
Hpy188I	TCNGA	7 cut(s)	193, 388, 405, 811, 1209, 1273, 1531
Hpy188III	TCNNGA	8 cut(s)	155, 182, 302, 611, 668, 785, 911, 1097
Hpy8I	GTNNAC	5 cut(s)	453, 822, 936, 1033, 1135
Hpy99I	CGWCG	2 cut(s)	265, 356
HpyAV	CCTTC	3 cut(s)	41, 48, 816
HpyCH4III	ACNGT	2 cut(s)	64, 131
HpyCH4IV	ACGT	1 cut(s)	164
HpyF10VI	GCNNNNNNNGC	6 cut(s)	53, 295, 347, 802, 1541, 1547
HpyF3I	CTNAG	9 cut(s)	175, 285, 480, 612, 669, 798, 1098, 1394, 1518
HpySE526I	ACGT	1 cut(s)	164
Hsp92II	CATG	7 cut(s)	567, 835, 867, 971, 1291, 1450, 1482
HspAI	GCGC	3 cut(s)	392, 475, 1427
Kpn2I	TCCGGA	1 cut(s)	154
Ksp22I	TGATCA	1 cut(s)	592
KspAI	GTTAAC	1 cut(s)	936
Kzo9I	GATC	3 cut(s)	188, 592, 1019
LmnI	GCTCC	4 cut(s)	79, 1073, 1375, 1547
LweI	GCATC	6 cut(s)	233, 275, 307, 940, 1310, 1528
MabI	ACCWGGT	1 cut(s)	319
MaeI	CTAG	1 cut(s)	1145
MaeII	ACGT	1 cut(s)	164
MaeIII	GTNAC	3 cut(s)	970, 1183, 1277
MalI	GATC	3 cut(s)	190, 594, 1021
MboI	GATC	3 cut(s)	188, 592, 1019
MboII	GAAGA	9 cut(s)	111, 126, 222, 671, 770, 847, 1303, 1428, 1462
MfeI	CAATTG	2 cut(s)	14, 429
MflI	RGATCY	1 cut(s)	188
MhlI	GDGCHC	2 cut(s)	421, 824
MlsI	TGGCCA	1 cut(s)	316
MluCI	AATT	9 cut(s)	14, 429, 569, 740, 851, 869, 1165, 1325, 1432
MluNI	TGGCCA	1 cut(s)	316
MlyI	GAGTC	5 cut(s)	211, 400, 916, 1204, 1405
MmeI	TCCRAC	2 cut(s)	428, 465
Mox20I	TGGCCA	1 cut(s)	316
MroI	TCCGGA	1 cut(s)	154
MscI	TGGCCA	1 cut(s)	316
MseI	TTAA	4 cut(s)	744, 935, 1349, 1431
Msp20I	TGGCCA	1 cut(s)	316
MspA1I	CMGCKG	1 cut(s)	289
MspI	CCGG	3 cut(s)	111, 155, 336
MspR9I	CCNGG	6 cut(s)	321, 336, 369, 678, 1263, 1503
MunI	CAATTG	2 cut(s)	14, 429
Mva1269I	GAATGC	1 cut(s)	1109
MvaI	CCWGG	5 cut(s)	321, 369, 678, 1263, 1503
MwoI	GCNNNNNNNGC	6 cut(s)	53, 295, 347, 802, 1541, 1547
NciI	CCSGG	1 cut(s)	336
NdeII	GATC	3 cut(s)	188, 592, 1019
NlaIII	CATG	7 cut(s)	567, 835, 867, 971, 1291, 1450, 1482
NlaIV	GGNNCC	6 cut(s)	190, 333, 418, 609, 642, 1075
NmuCI	GTSAC	2 cut(s)	970, 1277
NspI	RCATGY	3 cut(s)	567, 971, 1482
PceI	AGGCCT	1 cut(s)	805
PciI	ACATGT	1 cut(s)	563
PcsI	WCGNNNNNNNCGW	2 cut(s)	275, 1160
PctI	GAATGC	1 cut(s)	1109
PfeI	GAWTC	2 cut(s)	621, 788
PinAI	ACCGGT	1 cut(s)	110
PleI	GAGTC	5 cut(s)	211, 400, 915, 1204, 1404
PpsI	GAGTC	5 cut(s)	211, 400, 915, 1204, 1404
Ppu21I	YACGTR	1 cut(s)	165
PscI	ACATGT	1 cut(s)	563
Psp6I	CCWGG	5 cut(s)	319, 367, 676, 1261, 1501
PspFI	CCCAGC	3 cut(s)	982, 1127, 1336
PspGI	CCWGG	5 cut(s)	319, 367, 676, 1261, 1501
PspN4I	GGNNCC	6 cut(s)	190, 333, 418, 609, 642, 1075
PstI	CTGCAG	2 cut(s)	587, 769
PsuI	RGATCY	1 cut(s)	188
PvuII	CAGCTG	1 cut(s)	289
RsaI	GTAC	3 cut(s)	242, 493, 541
RsaNI	GTAC	3 cut(s)	241, 492, 540
SaqAI	TTAA	4 cut(s)	744, 935, 1349, 1431
Sau3AI	GATC	3 cut(s)	188, 592, 1019
SchI	GAGTC	5 cut(s)	211, 400, 916, 1204, 1405
ScrFI	CCNGG	6 cut(s)	321, 336, 369, 678, 1263, 1503
SduI	GDGCHC	2 cut(s)	421, 824
SexAI	ACCWGGT	1 cut(s)	319
SfaNI	GCATC	6 cut(s)	233, 275, 307, 940, 1310, 1528
SfcI	CTRYAG	3 cut(s)	456, 583, 765
SmlI	CTYRAG	1 cut(s)	783
SmoI	CTYRAG	1 cut(s)	783
Sse9I	AATT	9 cut(s)	14, 429, 569, 740, 851, 869, 1165, 1325, 1432
SseBI	AGGCCT	1 cut(s)	805
SsiI	CCGC	6 cut(s)	83, 86, 101, 348, 618, 965
SspMI	CTAG	1 cut(s)	1145
StuI	AGGCCT	1 cut(s)	805
StyD4I	CCNGG	6 cut(s)	319, 334, 367, 676, 1261, 1501
StyI	CCWWGG	1 cut(s)	1174
TaaI	ACNGT	2 cut(s)	64, 131
TaiI	ACGT	1 cut(s)	167
TaqI	TCGA	3 cut(s)	354, 905, 1154
TasI	AATT	9 cut(s)	14, 429, 569, 740, 851, 869, 1165, 1325, 1432
TatI	WGTACW	1 cut(s)	491
TauI	GCSGC	2 cut(s)	88, 103
TfiI	GAWTC	2 cut(s)	621, 788
Tru1I	TTAA	4 cut(s)	744, 935, 1349, 1431
Tru9I	TTAA	4 cut(s)	744, 935, 1349, 1431
TscAI	CASTG	4 cut(s)	102, 931, 946, 1165
TseFI	GTSAC	2 cut(s)	970, 1277
Tsp45I	GTSAC	2 cut(s)	970, 1277
TspDTI	ATGAA	7 cut(s)	672, 780, 848, 1102, 1140, 1304, 1463
TspRI	CASTG	4 cut(s)	102, 931, 946, 1165
VneI	GTGCAC	1 cut(s)	820
XagI	CCTNNNNNAGG	1 cut(s)	1500
XapI	RAATTY	6 cut(s)	569, 740, 851, 869, 1165, 1325
XceI	RCATGY	3 cut(s)	567, 971, 1482
XcmI	CCANNNNNNNNNTGG	1 cut(s)	428
XmiI	GTMKAC	1 cut(s)	452
XspI	CTAG	1 cut(s)	1145

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.