Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000820

Physical Location & Seq

Genomic Coordinates Reverse (-)

17613308 .. 17637539

Gene Structure 24232 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032672

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGATGTCATCCTGGCCCGCCCCGGATGCCGAACCCGGCCCGCCCGGCTTCAAACGCACCTCTGAAGCACTCTACCATCAGGCTCTTTTGGGTGCCCATAATCCAATTGGGCAAATGGAAGCTTGGTATTCGACAAATCCTTTAGCAAAGCGACCTAGATTGGAGAATACAAGCTTGCCTATTTATCCACAGAGGCCAGAAGAGAAAGATTGTGCCCACTATATGCAAACAAGAACCTGTAAATTTGGAGAGGGCTGCAAGTTTGACCATCCTATTTGGGTTCCTGATGGTGGAATCCCAGATTGGAAAGAGGTTCCACTTGTTGCTCCGAGTGAGTCCCTTCCTGAGAGATCTGGAGTGCCAGATTGTCCATACTTTCTAAAAACTCAAAGATGCAAGTTTGGTCTTAGATGCAAGTTTAATCATCCAAAGGACAAACTGGCTACCGTGGGTGCTTCAGAAAATGGTGATGTTTATGCCTTACCTGAGAGGCCTTCAGAACCCGCATGTGCATTCTACTTGAAAACTGGGCAATGCAAGTATGGTGCAACCTGCAAATTTAATCACCCAAAAGACATCCAGATACCATCAGCCACTCAAGAGAATAAATCTGGCGAAACTGAGACAGATCGTAAGACGGGCAGTGAAGTTGCTGTGAAGCCTCTTGTTTCATTCACTCCAGCGCTATTATATAACTCCAAAGAGCTTCCTGTAAGACCGGGTGAAGCTGATTGTCCGTTCTACCTGAAAACTGGAAGAAGACATAATTTATGCTGCAAGTATGGGGCCACTTGCCGGTACAATCACCCTGATAGATATGATATCAATCCACCTGTTGCTGCATTCAGTTATCCTCTCTCAGCGCCTTCAGTCGCCGGTTTTAACATAGGAGTTGCTAATCCAGCTGCCTTCACTTATCAAATTTTGGCACAACCAATGGTGGGAGCGAGCCCTACTTATGGTGCGCAATGCAGATTCCATCACCCGATTGATAGGCCAGCAGTGGCGTTATCAACAGCAAAGCCATCTCAACAAGAAAATGTGAAGCTAACGCTTGCTGGACTACCTAGGAGAGAGCTTAAAACTGGCACATGCAAGTATGGTGCAACCTGCAGATTTGACCACCCACCTCCTGGCGAAGTTGTAGCAATGGCAGCTTCACAAGCAAAATCTGATTCTGCTGGAGGGAAAGCATTCCATCACCCGATTGATAGGCCAGCAGTGGCGTTGTCAACAACAAAGCCATCTCAACAAGAAAATGTGAAGCTAACGCTTGCTGGACTACCTAGGAGGGAGTCTAGTTTCCATTTTACACCGAGATTGACTCTGTACCGCCACCACCACGTGCTCCTCCAACCCCGGAAAAGCAAAGAAAGGGTTCGGATTTGCAGACGCTGCTCCGGAGATTCTGGAAGAGAGGCCGCACCGTACTGGTCCTCCGACGACAAAGTCCAGGCCAGGATGCAGCTGGGAGGAGTCTTCCTTCTCACTCTCGCCACCACCGGGATCAGCGTCGGCTTCAATTTTCTGGGCCGGGACTTCTACAATTCCCTCGCCAATAAGGACCAAGAGCAGTTCATGAAGCAACTGCTTTACTACCTGGGTGCCTTTGCTGGTGGAATTCCGGTGAGCACCAATCGCTGCTCTTTCGCTCAGATTTTTGTGTTGCGGAATTATGCAAGAGAAACTCTTTCTTTGAGGTGGAGATCTTGGATGACGCGTTATTACCTTGACCGTTACCTGAGCAACCAAACATTTGACAGAATTCAATCCCAATCAATCATTGATAATCCAGATCAGCGAATTGTTGATGATCCAAGTTCTTTCACGGGGACATCCCTGTCATTCTCTTTAACACTCTTCAATGCGGTGATAGATCTCATATCATTCAGTAACATCTTATTTGGTATCTATCCTCCGCTGTTTGTTGTTCTTCTAGTATATTCGATTGGTGGAACACTGATCAGTGTCTTTATTGGAAGGGGTTTGGTGACATTAAACTTCCTGCAAGAGAAAAAGGAAGCAGATTTTTGTTGTGGACTTGTGCACGTTCGAGAAAATGCTGAATCAATAGCTTTCTATAGTGGTGAAGACAATGAAATGCAACTTTTGCTGCTACGCTTCAAAAGTGCTTTTGGAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001709 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006417 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032502 GO:0034248 GO:0034249 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0044424 GO:0044444 GO:0044464 GO:0045165 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048869 GO:0050779 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:1901363 GO:1903311 GO:1903313 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

715

Amino Acids

79.57

Weight (kDa)

8.98

Isoelectric Point (pI)

40.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH	PF00642	68 - 91	1.2e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	119 - 144	1.9e-08	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	167 - 191	7e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	361 - 377	3.9e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
ABC_membrane_2	PF06472	484 - 710	1.6e-36	ABC transporter transmembrane region 2
SbmA_BacA	PF05992	551 - 689	1.1e-08	SbmA/BacA-like family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12680
fragaria_vesca	FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640
malus_domestica	MD03G1280400.v1.1 MD06G1158700.v1.1 MD06G1158900.v1.1 MD06G1159100.v1.1 MD10G1219700.v1.1
prunus_persica	Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.7G013500_v2.0.a1 Prupe.8G067100_v2.0.a1
pyrus_communis	pycom06g14160 pycom06g14170 pycom10g18590
rosa_chinensis	RchiOBHm_Chr5g0022551 RchiOBHm_Chr5g0022581 RchiOBHm_Chr5g0022611 RchiOBHm_Chr5g0022711 RchiOBHm_Chr5g0022731 RchiOBHm_Chr5g0022751 RchiOBHm_Chr5g0022761 RchiOBHm_Chr5g0022841 RchiOBHm_Chr5g0022861 RchiOBHm_Chr5g0022911
rosa_laevigata	RLG00000032672 RLG00000032674 RLG00000032675 RLG00000032677 RLG00000032679 RLG00000035293
rosa_multiflora	Rmu_sc0000401.1_g000006 Rmu_sc0000401.1_g000007 Rmu_sc0000401.1_g000014 Rmu_sc0000401.1_g000026 Rmu_sc0000401.1_g000028 Rmu_sc0010181.1_g000001 Rmu_sc0010181.1_g000004 Rmu_sc0010181.1_g000009 Rmu_sc0042157.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056450 Rroxscaffold_1G00056490
rosa_rugosa	Rorug05G0075100
rosa_samantha	Rh5AG161600 Rh5BG099400 Rh5BG160400 Rh5BG160700 Rh5CG175100 Rh5DG161100 Rh5DG161300 Rh5DG161500 Rh5DG161600 Rh5DG161700 Rh5DG161900 Rh5DG162000 Rh5DG162400
rosa_wichuraiana	Rw5G014410 Rw5G014450 Rw5G014490 Rw5G014510 Rw5G014540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1448, 1840
Acc16I	TGCGCA	1 cut(s)	966
Acc36I	ACCTGC	2 cut(s)	560, 1118
AccB1I	GGYRCC	2 cut(s)	92, 1604
AccB7I	CCANNNNNTGG	1 cut(s)	1133
AccII	CGCG	1 cut(s)	1720
AccIII	TCCGGA	1 cut(s)	1400
AciI	CCGC	8 cut(s)	18, 41, 504, 1333, 1422, 1669, 1868, 1919
AclWI	GGATC	2 cut(s)	1514, 1808
AcsI	RAATTY	5 cut(s)	242, 557, 921, 1620, 1764
AcuI	CTGAAG	4 cut(s)	84, 441, 480, 852
AcvI	CACGTG	1 cut(s)	1345
AdeI	CACNNNGTG	1 cut(s)	1345
AfaI	GTAC	3 cut(s)	800, 1331, 1430
AfeI	AGCGCT	1 cut(s)	684
AfiI	CCNNNNNNNGG	6 cut(s)	290, 795, 941, 959, 1133, 1503
AflIII	ACRYGT	1 cut(s)	1718
AgsI	TTSAA	6 cut(s)	52, 523, 1522, 1769, 1864, 2125
AjnI	CCWGG	5 cut(s)	11, 1132, 1452, 1457, 1599
AjuI	GAANNNNNNNTTGG	2 cut(s)	286, 318
Alw21I	GWGCWC	3 cut(s)	1350, 1634, 2049
Alw26I	GTCTC	1 cut(s)	617
Alw44I	GTGCAC	1 cut(s)	2045
AlwI	GGATC	2 cut(s)	1514, 1808
AlwNI	CAGNNNCTG	1 cut(s)	1395
Aor13HI	TCCGGA	1 cut(s)	1400
Aor51HI	AGCGCT	1 cut(s)	684
ApaLI	GTGCAC	1 cut(s)	2045
ApeKI	GCWGC	9 cut(s)	255, 774, 839, 905, 1154, 1395, 1465, 1641, 2113
ApoI	RAATTY	5 cut(s)	242, 557, 921, 1620, 1764
Asp700I	GAANNNNTTC	2 cut(s)	1193, 1377
AspA2I	CCTAGG	2 cut(s)	1067, 1286
AspLEI	GCGC	3 cut(s)	685, 865, 967
AspS9I	GGNCC	6 cut(s)	15, 38, 786, 1434, 1531, 1564
AsuC2I	CCSGG	7 cut(s)	23, 36, 45, 720, 1360, 1504, 1535
AvaII	GGWCC	2 cut(s)	1434, 1564
AvrII	CCTAGG	2 cut(s)	1067, 1286
BaeGI	GKGCMC	3 cut(s)	97, 217, 2049
BanI	GGYRCC	2 cut(s)	92, 1604
BanII	GRGCYC	1 cut(s)	953
BbrPI	CACGTG	1 cut(s)	1345
BbsI	GAAGAC	3 cut(s)	766, 1471, 2097
Bbv12I	GWGCWC	3 cut(s)	1350, 1634, 2049
BbvI	GCAGC	9 cut(s)	242, 761, 826, 892, 1166, 1382, 1477, 1628, 2100
BccI	CCATC	8 cut(s)	84, 276, 281, 595, 987, 1033, 1206, 1252
BciT130I	CCWGG	5 cut(s)	13, 1134, 1454, 1459, 1601
BclI	TGATCA	1 cut(s)	1962
BcnI	CCSGG	7 cut(s)	23, 36, 45, 720, 1360, 1504, 1535
BcoDI	GTCTC	1 cut(s)	617
BfaI	CTAG	5 cut(s)	156, 1068, 1287, 1299, 1937
BfmI	CTRYAG	2 cut(s)	1111, 2080
BfoI	RGCGCY	2 cut(s)	686, 866
BfuAI	ACCTGC	2 cut(s)	560, 1118
BglI	GCCNNNNNGGC	1 cut(s)	45
BglII	AGATCT	3 cut(s)	350, 1706, 1876
BlnI	CCTAGG	2 cut(s)	1067, 1286
Bme18I	GGWCC	2 cut(s)	1434, 1564
BmgT120I	GGNCC	6 cut(s)	15, 38, 786, 1434, 1531, 1564
BmiI	GGNNCC	5 cut(s)	94, 282, 315, 787, 1606
BmrI	ACTGGG	1 cut(s)	537
BmsI	GCATC	4 cut(s)	16, 383, 401, 1452
BmuI	ACTGGG	1 cut(s)	537
BpiI	GAAGAC	3 cut(s)	766, 1471, 2097
BplI	GAGNNNNNCTC	2 cut(s)	1309, 1341
BpmI	CTGGAG	3 cut(s)	375, 663, 1203
Bpu10I	CCTNAGC	1 cut(s)	1742
BpuEI	CTTGAG	1 cut(s)	582
BpuMI	CCSGG	7 cut(s)	23, 36, 45, 720, 1360, 1504, 1535
BsaAI	YACGTR	1 cut(s)	1345
BsaBI	GATNNNNATC	1 cut(s)	825
BsaJI	CCNNGG	6 cut(s)	21, 447, 1067, 1286, 1358, 1600
BsaWI	WCCGGW	2 cut(s)	1400, 1624
BsaXI	ACNNNNNCTCC	2 cut(s)	1421, 1451
Bsc4I	CCNNNNNNNGG	6 cut(s)	290, 795, 941, 959, 1133, 1503
Bse118I	RCCGGY	2 cut(s)	795, 875
Bse1I	ACTGG	5 cut(s)	444, 532, 757, 1090, 1436
Bse3DI	GCAATG	3 cut(s)	539, 974, 1155
Bse8I	GATNNNNATC	1 cut(s)	825
BseAI	TCCGGA	1 cut(s)	1400
BseBI	CCWGG	5 cut(s)	13, 1134, 1454, 1459, 1601
BseDI	CCNNGG	6 cut(s)	21, 447, 1067, 1286, 1358, 1600
BseGI	GGATG	8 cut(s)	8, 31, 268, 424, 576, 1467, 1719, 1835
BseJI	GATNNNNATC	1 cut(s)	825
BseLI	CCNNNNNNNGG	6 cut(s)	290, 795, 941, 959, 1133, 1503
BseMI	GCAATG	3 cut(s)	539, 974, 1155
BseMII	CTCAG	6 cut(s)	336, 477, 612, 873, 1667, 1733
BseNI	ACTGG	5 cut(s)	444, 532, 757, 1090, 1436
BseRI	GAGGAG	2 cut(s)	1340, 1488
BseSI	GKGCMC	3 cut(s)	97, 217, 2049
BseXI	GCAGC	9 cut(s)	242, 761, 826, 892, 1166, 1382, 1477, 1628, 2100
BseYI	CCCAGC	1 cut(s)	1468
Bsh1236I	CGCG	1 cut(s)	1720
BshNI	GGYRCC	2 cut(s)	92, 1604
BsiHKAI	GWGCWC	3 cut(s)	1350, 1634, 2049
BslFI	GGGAC	3 cut(s)	322, 1550, 1846
BslI	CCNNNNNNNGG	6 cut(s)	290, 795, 941, 959, 1133, 1503
BsmAI	GTCTC	1 cut(s)	617
BsmFI	GGGAC	3 cut(s)	322, 1550, 1846
BsmI	GAATGC	3 cut(s)	512, 842, 1193
Bsp1286I	GDGCHC	6 cut(s)	97, 217, 953, 1350, 1634, 2049
Bsp13I	TCCGGA	1 cut(s)	1400
Bsp143I	GATC	8 cut(s)	350, 628, 1506, 1706, 1795, 1813, 1876, 1962
BspACI	CCGC	8 cut(s)	18, 41, 504, 1333, 1422, 1669, 1868, 1919
BspCNI	CTCAG	6 cut(s)	337, 478, 613, 872, 1666, 1734
BspEI	TCCGGA	1 cut(s)	1400
BspFNI	CGCG	1 cut(s)	1720
BspHI	TCATGA	1 cut(s)	1578
BspLI	GGNNCC	5 cut(s)	94, 282, 315, 787, 1606
BspMAI	CTGCAG	1 cut(s)	1115
BspMI	ACCTGC	2 cut(s)	560, 1118
BspPI	GGATC	2 cut(s)	1514, 1808
BspT107I	GGYRCC	2 cut(s)	92, 1604
BsrDI	GCAATG	3 cut(s)	539, 974, 1155
BsrFI	RCCGGY	2 cut(s)	795, 875
BsrI	ACTGG	5 cut(s)	444, 532, 757, 1090, 1436
BssAI	RCCGGY	2 cut(s)	795, 875
BssECI	CCNNGG	6 cut(s)	21, 447, 1067, 1286, 1358, 1600
BssMI	GATC	8 cut(s)	350, 628, 1506, 1706, 1795, 1813, 1876, 1962
BssT1I	CCWWGG	2 cut(s)	1067, 1286
Bst2UI	CCWGG	5 cut(s)	13, 1134, 1454, 1459, 1601
Bst4CI	ACNGT	3 cut(s)	448, 1428, 1736
Bst6I	CTCTTC	3 cut(s)	195, 1408, 1865
BstAPI	GCANNNNNTGC	2 cut(s)	1395, 2110
BstBAI	YACGTR	1 cut(s)	1345
BstC8I	GCNNGC	8 cut(s)	18, 41, 176, 949, 999, 1056, 1218, 1275
BstDEI	CTNAG	7 cut(s)	345, 407, 486, 621, 859, 1653, 1742
BstDSI	CCRYGG	1 cut(s)	447
BstF5I	GGATG	8 cut(s)	8, 31, 268, 424, 576, 1467, 1719, 1835
BstFNI	CGCG	1 cut(s)	1720
BstH2I	RGCGCY	2 cut(s)	686, 866
BstHHI	GCGC	3 cut(s)	685, 865, 967
BstKTI	GATC	8 cut(s)	353, 631, 1509, 1709, 1798, 1816, 1879, 1965
BstMAI	GTCTC	1 cut(s)	617
BstMBI	GATC	8 cut(s)	350, 628, 1506, 1706, 1795, 1813, 1876, 1962
BstMWI	GCNNNNNNNGC	9 cut(s)	26, 45, 54, 902, 1154, 1163, 1395, 1638, 2110
BstNI	CCWGG	5 cut(s)	13, 1134, 1454, 1459, 1601
BstNSI	RCATGY	2 cut(s)	510, 1095
BstSFI	CTRYAG	2 cut(s)	1111, 2080
BstSLI	GKGCMC	3 cut(s)	97, 217, 2049
BstUI	CGCG	1 cut(s)	1720
BstV1I	GCAGC	9 cut(s)	242, 761, 826, 892, 1166, 1382, 1477, 1628, 2100
BstV2I	GAAGAC	3 cut(s)	766, 1471, 2097
BstX2I	RGATCY	3 cut(s)	350, 1706, 1876
BstYI	RGATCY	3 cut(s)	350, 1706, 1876
BtgI	CCRYGG	1 cut(s)	447
BtsCI	GGATG	8 cut(s)	8, 31, 268, 424, 576, 1467, 1719, 1835
BtsI	GCAGTG	3 cut(s)	649, 1008, 1227
BtsIMutI	CAGTG	5 cut(s)	649, 1008, 1227, 1958, 1972
BveI	ACCTGC	2 cut(s)	560, 1118
Cac8I	GCNNGC	8 cut(s)	18, 41, 176, 949, 999, 1056, 1218, 1275
CaiI	CAGNNNCTG	1 cut(s)	1395
CciI	TCATGA	1 cut(s)	1578
CfoI	GCGC	3 cut(s)	685, 865, 967
Cfr10I	RCCGGY	2 cut(s)	795, 875
Cfr13I	GGNCC	6 cut(s)	15, 38, 786, 1434, 1531, 1564
CseI	GACGC	3 cut(s)	1401, 1501, 1726
Csp6I	GTAC	3 cut(s)	799, 1330, 1429
CviAII	CATG	3 cut(s)	507, 1092, 1579
CviQI	GTAC	3 cut(s)	799, 1330, 1429
DdeI	CTNAG	7 cut(s)	345, 407, 486, 621, 859, 1653, 1742
DpnI	GATC	8 cut(s)	352, 630, 1508, 1708, 1797, 1815, 1878, 1964
DpnII	GATC	8 cut(s)	350, 628, 1506, 1706, 1795, 1813, 1876, 1962
DraIII	CACNNNGTG	1 cut(s)	1345
DrdI	GACNNNNNNGTC	2 cut(s)	1448, 1840
DseDI	GACNNNNNNGTC	2 cut(s)	1448, 1840
Eam1104I	CTCTTC	3 cut(s)	195, 1408, 1865
EarI	CTCTTC	3 cut(s)	195, 1408, 1865
Eco130I	CCWWGG	2 cut(s)	1067, 1286
Eco147I	AGGCCT	1 cut(s)	493
Eco24I	GRGCYC	1 cut(s)	953
Eco32I	GATATC	1 cut(s)	823
Eco47I	GGWCC	2 cut(s)	1434, 1564
Eco47III	AGCGCT	1 cut(s)	684
Eco57I	CTGAAG	4 cut(s)	84, 441, 480, 852
Eco72I	CACGTG	1 cut(s)	1345
EcoRI	GAATTC	2 cut(s)	1620, 1764
EcoRII	CCWGG	5 cut(s)	11, 1132, 1452, 1457, 1599
EcoRV	GATATC	1 cut(s)	823
EcoT14I	CCWWGG	2 cut(s)	1067, 1286
EcoT38I	GRGCYC	1 cut(s)	953
ErhI	CCWWGG	2 cut(s)	1067, 1286
FaeI	CATG	3 cut(s)	510, 1095, 1582
FaqI	GGGAC	3 cut(s)	322, 1550, 1846
FatI	CATG	3 cut(s)	506, 1091, 1578
FauI	CCCGC	3 cut(s)	25, 48, 511
FbaI	TGATCA	1 cut(s)	1962
FokI	GGATG	7 cut(s)	38, 255, 411, 563, 1474, 1726, 1822
FriOI	GRGCYC	1 cut(s)	953
FspBI	CTAG	5 cut(s)	156, 1068, 1287, 1299, 1937
FspI	TGCGCA	1 cut(s)	966
GlaI	GCGC	3 cut(s)	684, 864, 966
GsaI	CCCAGC	1 cut(s)	1472
GsuI	CTGGAG	3 cut(s)	375, 663, 1203
HaeII	RGCGCY	2 cut(s)	686, 866
HgaI	GACGC	3 cut(s)	1401, 1501, 1726
HhaI	GCGC	3 cut(s)	685, 865, 967
Hin1II	CATG	3 cut(s)	510, 1095, 1582
Hin6I	GCGC	3 cut(s)	683, 863, 965
HinP1I	GCGC	3 cut(s)	683, 863, 965
HincII	GTYRAC	1 cut(s)	1233
HindII	GTYRAC	1 cut(s)	1233
HindIII	AAGCTT	2 cut(s)	120, 172
HinfI	GANTC	9 cut(s)	294, 335, 975, 1175, 1295, 1324, 1406, 1476, 2066
Hpy166II	GTNNAC	3 cut(s)	1233, 2039, 2047
Hpy188I	TCNGA	8 cut(s)	64, 330, 460, 499, 1174, 1383, 1441, 1656
Hpy8I	GTNNAC	3 cut(s)	1233, 2039, 2047
Hpy99I	CGWCG	2 cut(s)	1445, 1517
HpyAV	CCTTC	6 cut(s)	350, 504, 876, 919, 1493, 1974
HpyCH4III	ACNGT	3 cut(s)	448, 1428, 1736
HpyCH4IV	ACGT	2 cut(s)	1344, 2049
HpyF10VI	GCNNNNNNNGC	9 cut(s)	26, 45, 54, 902, 1154, 1163, 1395, 1638, 2110
HpyF3I	CTNAG	7 cut(s)	345, 407, 486, 621, 859, 1653, 1742
HpySE526I	ACGT	2 cut(s)	1344, 2049
Hsp92II	CATG	3 cut(s)	510, 1095, 1582
HspAI	GCGC	3 cut(s)	683, 863, 965
Kpn2I	TCCGGA	1 cut(s)	1400
Ksp22I	TGATCA	1 cut(s)	1962
Kzo9I	GATC	8 cut(s)	350, 628, 1506, 1706, 1795, 1813, 1876, 1962
LmnI	GCTCC	4 cut(s)	331, 944, 1353, 1403
Lsp1109I	GCAGC	9 cut(s)	242, 761, 826, 892, 1166, 1382, 1477, 1628, 2100
LweI	GCATC	4 cut(s)	16, 383, 401, 1452
MaeI	CTAG	5 cut(s)	156, 1068, 1287, 1299, 1937
MaeII	ACGT	2 cut(s)	1344, 2049
MaeIII	GTNAC	3 cut(s)	1736, 1892, 1990
MalI	GATC	8 cut(s)	352, 630, 1508, 1708, 1797, 1815, 1878, 1964
MboI	GATC	8 cut(s)	350, 628, 1506, 1706, 1795, 1813, 1876, 1962
MboII	GAAGA	8 cut(s)	212, 768, 771, 1425, 1471, 1852, 1925, 2102
MfeI	CAATTG	1 cut(s)	105
MflI	RGATCY	3 cut(s)	350, 1706, 1876
MhlI	GDGCHC	6 cut(s)	97, 217, 953, 1350, 1634, 2049
MluI	ACGCGT	1 cut(s)	1718
MlyI	GAGTC	4 cut(s)	344, 1304, 1318, 1485
MmeI	TCCRAC	2 cut(s)	1378, 1464
MroI	TCCGGA	1 cut(s)	1400
MroXI	GAANNNNTTC	2 cut(s)	1193, 1377
MseI	TTAA	6 cut(s)	420, 561, 882, 1080, 1853, 1997
MspA1I	CMGCKG	3 cut(s)	905, 1468, 1921
MunI	CAATTG	1 cut(s)	105
Mva1269I	GAATGC	3 cut(s)	512, 842, 1193
MvaI	CCWGG	5 cut(s)	13, 1134, 1454, 1459, 1601
MvnI	CGCG	1 cut(s)	1720
MwoI	GCNNNNNNNGC	9 cut(s)	26, 45, 54, 902, 1154, 1163, 1395, 1638, 2110
NciI	CCSGG	7 cut(s)	23, 36, 45, 720, 1360, 1504, 1535
NdeII	GATC	8 cut(s)	350, 628, 1506, 1706, 1795, 1813, 1876, 1962
NlaIII	CATG	3 cut(s)	510, 1095, 1582
NlaIV	GGNNCC	5 cut(s)	94, 282, 315, 787, 1606
NmuCI	GTSAC	1 cut(s)	1990
NsbI	TGCGCA	1 cut(s)	966
NspI	RCATGY	2 cut(s)	510, 1095
PagI	TCATGA	1 cut(s)	1578
PceI	AGGCCT	1 cut(s)	493
PctI	GAATGC	3 cut(s)	512, 842, 1193
PdmI	GAANNNNTTC	2 cut(s)	1193, 1377
PfeI	GAWTC	5 cut(s)	294, 975, 1175, 1406, 2066
PflFI	GACNNNGTC	1 cut(s)	1448
PflMI	CCANNNNNTGG	1 cut(s)	1133
PleI	GAGTC	4 cut(s)	343, 1303, 1318, 1484
PmaCI	CACGTG	1 cut(s)	1345
PmlI	CACGTG	1 cut(s)	1345
PpsI	GAGTC	4 cut(s)	343, 1303, 1318, 1484
Ppu21I	YACGTR	1 cut(s)	1345
Psp6I	CCWGG	5 cut(s)	11, 1132, 1452, 1457, 1599
PspCI	CACGTG	1 cut(s)	1345
PspFI	CCCAGC	1 cut(s)	1468
PspGI	CCWGG	5 cut(s)	11, 1132, 1452, 1457, 1599
PspN4I	GGNNCC	5 cut(s)	94, 282, 315, 787, 1606
PspPI	GGNCC	6 cut(s)	15, 38, 786, 1434, 1531, 1564
PstI	CTGCAG	1 cut(s)	1115
PstNI	CAGNNNCTG	1 cut(s)	1395
PsuI	RGATCY	3 cut(s)	350, 1706, 1876
PsyI	GACNNNGTC	1 cut(s)	1448
PvuII	CAGCTG	2 cut(s)	905, 1468
RsaI	GTAC	3 cut(s)	800, 1331, 1430
RsaNI	GTAC	3 cut(s)	799, 1330, 1429
SaqAI	TTAA	6 cut(s)	420, 561, 882, 1080, 1853, 1997
Sau3AI	GATC	8 cut(s)	350, 628, 1506, 1706, 1795, 1813, 1876, 1962
Sau96I	GGNCC	6 cut(s)	15, 38, 786, 1434, 1531, 1564
SchI	GAGTC	4 cut(s)	344, 1304, 1318, 1485
SduI	GDGCHC	6 cut(s)	97, 217, 953, 1350, 1634, 2049
SfaNI	GCATC	4 cut(s)	16, 383, 401, 1452
SfcI	CTRYAG	2 cut(s)	1111, 2080
SinI	GGWCC	2 cut(s)	1434, 1564
SmlI	CTYRAG	1 cut(s)	597
SmoI	CTYRAG	1 cut(s)	597
SseBI	AGGCCT	1 cut(s)	493
SsiI	CCGC	8 cut(s)	18, 41, 504, 1333, 1422, 1669, 1868, 1919
SspMI	CTAG	5 cut(s)	156, 1068, 1287, 1299, 1937
StuI	AGGCCT	1 cut(s)	493
StyI	CCWWGG	2 cut(s)	1067, 1286
TaaI	ACNGT	3 cut(s)	448, 1428, 1736
TaiI	ACGT	2 cut(s)	1347, 2052
TaqI	TCGA	3 cut(s)	131, 1946, 2053
TauI	GCSGC	1 cut(s)	1424
TfiI	GAWTC	5 cut(s)	294, 975, 1175, 1406, 2066
Tru1I	TTAA	6 cut(s)	420, 561, 882, 1080, 1853, 1997
Tru9I	TTAA	6 cut(s)	420, 561, 882, 1080, 1853, 1997
TscAI	CASTG	5 cut(s)	649, 1008, 1227, 1965, 1972
TseFI	GTSAC	1 cut(s)	1990
TseI	GCWGC	9 cut(s)	255, 774, 839, 905, 1154, 1395, 1465, 1641, 2113
Tsp45I	GTSAC	1 cut(s)	1990
TspDTI	ATGAA	4 cut(s)	660, 1567, 1595, 2112
TspGWI	ACGGA	1 cut(s)	726
TspRI	CASTG	5 cut(s)	649, 1008, 1227, 1965, 1972
Tth111I	GACNNNGTC	1 cut(s)	1448
Van91I	CCANNNNNTGG	1 cut(s)	1133
VneI	GTGCAC	1 cut(s)	2045
VpaK11BI	GGWCC	2 cut(s)	1434, 1564
XapI	RAATTY	5 cut(s)	242, 557, 921, 1620, 1764
XceI	RCATGY	2 cut(s)	510, 1095
XcmI	CCANNNNNNNNNTGG	3 cut(s)	104, 1130, 1465
XmaJI	CCTAGG	2 cut(s)	1067, 1286
XmnI	GAANNNNTTC	2 cut(s)	1193, 1377
XspI	CTAG	5 cut(s)	156, 1068, 1287, 1299, 1937

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.