Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000401.1

Orthogroup ID

OG0000820

Physical Location & Seq

Genomic Coordinates Reverse (-)

100867 .. 105419

Gene Structure 4553 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000401.1_g000026.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

atggcgagccatctcttcacctacggcgccgccgaatcagctccagctctcactcctgctctctccaccgtctacaccccccgctccctagcgcaatcctacctctccgacccgacccaccgctacctttccgggtcggaccctctctccacttcctccatgtacctcgccggcaccgacggcctcggcgcttactccgacgccgccagagcgacgtcgtatatgatgtcctcctggcccgcccccgatgccgaacccggcccgcccggcttcaaacgcacctctgaaggttgtacgttgaagatatttggaatggttgcctttatcatgaaggaagatttttcagtcaaagatctcaaacctagaatggtgaaagatattatagccaatcatgttccacttgttgctccaagtgagtcccttcccgagagacctggaacaccagattgtccatactttttaaaaactcaaagatgcaagtttggtcttagatgcaagtttaatcatccaaaggacaaactggccactgcgggcgcttcagaaaatggtgatgtttatgccttacccgagaggccttctgaacctgcatgtgcattctacttgaaaactgggcaatgcaagtatggtgcaacctgcaaatttaatcacccaaaagacatccagataccatcagccactcaagagaataaatctggcgaaactgagacagatcttaagacggagggcagtgaagttgctgtgaagcctcttgtttcattcactccagcactattatataactccaaagagcttcctgtaagaccgggtgaagctgattgtccattctacctgaaaactggaagctgcaagtatggggccacttgccggtacaatcaccctgatagatatgatatcaatccacctgttgctgcaatcagctatcctctttcggcgccttcagttgcaggttttaacataggagttgctaatccagctgccttcacttatcaaactttggcacaaccaacggtgggagcgagccctactgtttatcctcagcgatttggacaggctgagtgtgaatactatatgaagactggggaatgtaagtatggtgcacaatgcagattccatcacccgattgataggccagcagtggcgttgtcaacaacaaagccatctcaacaagaaaatgtgaagctaacgcttgctggacttcctaggagagagggtgccgttatctgtgtgtattaccttaaaactggcacatgcaagtatggtgcaacctgcagatttgaccacccacctcctggcgaagttgtagcaatggcagcttcacaagcaaaatctgattcaactggaggaaaagcataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001709 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006417 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032502 GO:0034248 GO:0034249 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0044424 GO:0044444 GO:0044464 GO:0045165 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048869 GO:0050779 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:1901363 GO:1903311 GO:1903313 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

450

Amino Acids

48.54

Weight (kDa)

8.46

Isoelectric Point (pI)

40.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12680
fragaria_vesca	FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640
malus_domestica	MD03G1280400.v1.1 MD06G1158700.v1.1 MD06G1158900.v1.1 MD06G1159100.v1.1 MD10G1219700.v1.1
prunus_persica	Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.7G013500_v2.0.a1 Prupe.8G067100_v2.0.a1
pyrus_communis	pycom06g14160 pycom06g14170 pycom10g18590
rosa_chinensis	RchiOBHm_Chr5g0022551 RchiOBHm_Chr5g0022581 RchiOBHm_Chr5g0022611 RchiOBHm_Chr5g0022711 RchiOBHm_Chr5g0022731 RchiOBHm_Chr5g0022751 RchiOBHm_Chr5g0022761 RchiOBHm_Chr5g0022841 RchiOBHm_Chr5g0022861 RchiOBHm_Chr5g0022911
rosa_laevigata	RLG00000032672 RLG00000032674 RLG00000032675 RLG00000032677 RLG00000032679 RLG00000035293
rosa_multiflora	Rmu_sc0000401.1_g000006 Rmu_sc0000401.1_g000007 Rmu_sc0000401.1_g000014 Rmu_sc0000401.1_g000026 Rmu_sc0000401.1_g000028 Rmu_sc0010181.1_g000001 Rmu_sc0010181.1_g000004 Rmu_sc0010181.1_g000009 Rmu_sc0042157.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056450 Rroxscaffold_1G00056490
rosa_rugosa	Rorug05G0075100
rosa_samantha	Rh5AG161600 Rh5BG099400 Rh5BG160400 Rh5BG160700 Rh5CG175100 Rh5DG161100 Rh5DG161300 Rh5DG161500 Rh5DG161600 Rh5DG161700 Rh5DG161900 Rh5DG162000 Rh5DG162400
rosa_wichuraiana	Rw5G014410 Rw5G014450 Rw5G014490 Rw5G014510 Rw5G014540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	218
Acc36I	ACCTGC	4 cut(s)	592, 641, 935, 1274
AccB1I	GGYRCC	4 cut(s)	26, 173, 931, 1211
AccB7I	CCANNNNNTGG	1 cut(s)	1289
AccBSI	CCGCTC	1 cut(s)	84
AccI	GTMKAC	1 cut(s)	72
AciI	CCGC	7 cut(s)	30, 82, 121, 204, 240, 263, 530
AcoI	YGGCCR	1 cut(s)	522
AcsI	RAATTY	1 cut(s)	638
AcuI	CTGAAG	3 cut(s)	306, 522, 921
AcyI	GRCGYC	4 cut(s)	27, 201, 215, 932
AfaI	GTAC	3 cut(s)	164, 295, 869
AfiI	CCNNNNNNNGG	3 cut(s)	864, 1010, 1289
AflII	CTTAAG	1 cut(s)	713
AgsI	TTSAA	4 cut(s)	274, 301, 604, 1335
AjnI	CCWGG	3 cut(s)	233, 433, 1288
AluBI	AGCT	9 cut(s)	41, 47, 790, 812, 843, 918, 974, 1180, 1313
AluI	AGCT	9 cut(s)	41, 47, 790, 812, 843, 918, 974, 1180, 1313
Alw21I	GWGCWC	1 cut(s)	1099
Alw26I	GTCTC	2 cut(s)	424, 698
Alw44I	GTGCAC	1 cut(s)	1095
Ama87I	CYCGRG	2 cut(s)	425, 566
AoxI	GGCC	7 cut(s)	181, 236, 259, 522, 572, 855, 1127
ApaLI	GTGCAC	1 cut(s)	1095
ApeKI	GCWGC	4 cut(s)	843, 908, 974, 1310
ApoI	RAATTY	1 cut(s)	638
AspA2I	CCTAGG	1 cut(s)	1199
AspLEI	GCGC	5 cut(s)	29, 94, 191, 536, 934
AspS9I	GGNCC	4 cut(s)	139, 237, 260, 855
AsuC2I	CCSGG	4 cut(s)	133, 258, 267, 804
AsuHPI	GGTGA	7 cut(s)	10, 382, 560, 638, 818, 866, 1106
AvaI	CYCGRG	2 cut(s)	425, 566
AvaII	GGWCC	1 cut(s)	139
AvrII	CCTAGG	1 cut(s)	1199
BaeGI	GKGCMC	1 cut(s)	1099
BalI	TGGCCA	1 cut(s)	524
BanI	GGYRCC	4 cut(s)	26, 173, 931, 1211
BanII	GRGCYC	1 cut(s)	1022
BbsI	GAAGAC	1 cut(s)	1079
Bbv12I	GWGCWC	1 cut(s)	1099
BbvCI	CCTCAGC	1 cut(s)	1035
BbvI	GCAGC	4 cut(s)	830, 895, 961, 1322
BccI	CCATC	4 cut(s)	18, 676, 1119, 1165
BceAI	ACGGC	3 cut(s)	40, 196, 1199
BciT130I	CCWGG	3 cut(s)	235, 435, 1290
BcnI	CCSGG	4 cut(s)	133, 258, 267, 804
BcoDI	GTCTC	2 cut(s)	424, 698
BfaI	CTAG	3 cut(s)	89, 363, 1200
BfmI	CTRYAG	1 cut(s)	1267
BfoI	RGCGCY	4 cut(s)	30, 192, 537, 935
BfrI	CTTAAG	1 cut(s)	713
BfuAI	ACCTGC	4 cut(s)	592, 641, 935, 1274
BglI	GCCNNNNNGGC	1 cut(s)	267
BglII	AGATCT	2 cut(s)	352, 709
BisI	GCNGC	6 cut(s)	30, 204, 844, 909, 975, 1311
BlnI	CCTAGG	1 cut(s)	1199
BlsI	GCNGC	6 cut(s)	31, 205, 845, 910, 976, 1312
Bme1390I	CCNGG	7 cut(s)	133, 235, 258, 267, 435, 804, 1290
Bme18I	GGWCC	1 cut(s)	139
BmeT110I	CYCGRG	2 cut(s)	425, 566
BmgT120I	GGNCC	4 cut(s)	139, 237, 260, 855
BmiI	GGNNCC	6 cut(s)	28, 141, 175, 856, 933, 1213
BmrFI	CCNGG	7 cut(s)	133, 235, 258, 267, 435, 804, 1290
BmrI	ACTGGG	2 cut(s)	618, 1086
BmsI	GCATC	3 cut(s)	238, 464, 482
BmuI	ACTGGG	2 cut(s)	618, 1086
BpiI	GAAGAC	1 cut(s)	1079
BpmI	CTGGAG	2 cut(s)	27, 747
Bpu10I	CCTNAGC	1 cut(s)	1035
BpuEI	CTTGAG	1 cut(s)	663
BpuMI	CCSGG	4 cut(s)	133, 258, 267, 804
BsaBI	GATNNNNATC	1 cut(s)	894
BsaHI	GRCGYC	4 cut(s)	27, 201, 215, 932
BsaI	GGTCTC	1 cut(s)	424
BsaJI	CCNNGG	2 cut(s)	184, 1199
BsaXI	ACNNNNNCTCC	4 cut(s)	131, 161, 1195, 1225
Bsc4I	CCNNNNNNNGG	3 cut(s)	864, 1010, 1289
Bse118I	RCCGGY	2 cut(s)	170, 864
Bse1I	ACTGG	6 cut(s)	525, 613, 841, 1081, 1246, 1342
Bse3DI	GCAATG	2 cut(s)	620, 1311
Bse8I	GATNNNNATC	1 cut(s)	894
BseBI	CCWGG	3 cut(s)	235, 435, 1290
BseDI	CCNNGG	2 cut(s)	184, 1199
BseGI	GGATG	2 cut(s)	505, 657
BseJI	GATNNNNATC	1 cut(s)	894
BseLI	CCNNNNNNNGG	3 cut(s)	864, 1010, 1289
BseMI	GCAATG	2 cut(s)	620, 1311
BseMII	CTCAG	3 cut(s)	693, 1044, 1049
BseNI	ACTGG	6 cut(s)	525, 613, 841, 1081, 1246, 1342
BseSI	GKGCMC	1 cut(s)	1099
BseXI	GCAGC	4 cut(s)	830, 895, 961, 1322
BshFI	GGCC	7 cut(s)	183, 238, 261, 524, 574, 857, 1129
BshNI	GGYRCC	4 cut(s)	26, 173, 931, 1211
BsiHKAI	GWGCWC	1 cut(s)	1099
BsiHKCI	CYCGRG	2 cut(s)	425, 566
BsiSI	CCGG	6 cut(s)	132, 171, 258, 267, 803, 865
BslFI	GGGAC	1 cut(s)	403
BslI	CCNNNNNNNGG	3 cut(s)	864, 1010, 1289
BsmAI	GTCTC	2 cut(s)	424, 698
BsmFI	GGGAC	1 cut(s)	403
BsmI	GAATGC	1 cut(s)	593
BsnI	GGCC	7 cut(s)	183, 238, 261, 524, 574, 857, 1129
Bso31I	GGTCTC	1 cut(s)	424
BsoBI	CYCGRG	2 cut(s)	425, 566
Bsp1286I	GDGCHC	2 cut(s)	1022, 1099
Bsp143I	GATC	2 cut(s)	352, 709
BspACI	CCGC	7 cut(s)	30, 82, 121, 204, 240, 263, 530
BspANI	GGCC	7 cut(s)	183, 238, 261, 524, 574, 857, 1129
BspCNI	CTCAG	3 cut(s)	694, 1045, 1048
BspHI	TCATGA	1 cut(s)	327
BspLI	GGNNCC	6 cut(s)	28, 141, 175, 856, 933, 1213
BspMAI	CTGCAG	1 cut(s)	1271
BspMI	ACCTGC	4 cut(s)	592, 641, 935, 1274
BspT107I	GGYRCC	4 cut(s)	26, 173, 931, 1211
BspTI	CTTAAG	1 cut(s)	713
BspTNI	GGTCTC	1 cut(s)	424
BsrBI	CCGCTC	1 cut(s)	84
BsrDI	GCAATG	2 cut(s)	620, 1311
BsrFI	RCCGGY	2 cut(s)	170, 864
BsrI	ACTGG	6 cut(s)	525, 613, 841, 1081, 1246, 1342
BssAI	RCCGGY	2 cut(s)	170, 864
BssECI	CCNNGG	2 cut(s)	184, 1199
BssMI	GATC	2 cut(s)	352, 709
BssNI	GRCGYC	4 cut(s)	27, 201, 215, 932
BssT1I	CCWWGG	1 cut(s)	1199
Bst2UI	CCWGG	3 cut(s)	235, 435, 1290
Bst4CI	ACNGT	3 cut(s)	70, 1009, 1027
Bst6I	CTCTTC	1 cut(s)	20
BstACI	GRCGYC	4 cut(s)	27, 201, 215, 932
BstAFI	CTTAAG	1 cut(s)	713
BstC8I	GCNNGC	8 cut(s)	7, 172, 240, 263, 532, 1018, 1131, 1188
BstDEI	CTNAG	4 cut(s)	488, 702, 1035, 1053
BstF5I	GGATG	2 cut(s)	505, 657
BstH2I	RGCGCY	4 cut(s)	30, 192, 537, 935
BstHHI	GCGC	5 cut(s)	29, 94, 191, 536, 934
BstKTI	GATC	2 cut(s)	355, 712
BstMAI	GTCTC	2 cut(s)	424, 698
BstMBI	GATC	2 cut(s)	352, 709
BstMWI	GCNNNNNNNGC	9 cut(s)	38, 180, 209, 248, 267, 276, 971, 1310, 1319
BstNI	CCWGG	3 cut(s)	235, 435, 1290
BstNSI	RCATGY	2 cut(s)	591, 1251
BstSCI	CCNGG	7 cut(s)	131, 233, 256, 265, 433, 802, 1288
BstSFI	CTRYAG	1 cut(s)	1267
BstSLI	GKGCMC	1 cut(s)	1099
BstV1I	GCAGC	4 cut(s)	830, 895, 961, 1322
BstV2I	GAAGAC	1 cut(s)	1079
BstX2I	RGATCY	2 cut(s)	352, 709
BstYI	RGATCY	2 cut(s)	352, 709
BsuRI	GGCC	7 cut(s)	183, 238, 261, 524, 574, 857, 1129
BtsCI	GGATG	2 cut(s)	505, 657
BtsI	GCAGTG	3 cut(s)	525, 733, 1140
BtsIMutI	CAGTG	3 cut(s)	525, 733, 1140
BveI	ACCTGC	4 cut(s)	592, 641, 935, 1274
Cac8I	GCNNGC	8 cut(s)	7, 172, 240, 263, 532, 1018, 1131, 1188
CciI	TCATGA	1 cut(s)	327
CfoI	GCGC	5 cut(s)	29, 94, 191, 536, 934
Cfr10I	RCCGGY	2 cut(s)	170, 864
Cfr13I	GGNCC	4 cut(s)	139, 237, 260, 855
CseI	GACGC	1 cut(s)	209
Csp6I	GTAC	3 cut(s)	163, 294, 868
CviAII	CATG	5 cut(s)	160, 328, 392, 588, 1248
CviQI	GTAC	3 cut(s)	163, 294, 868
DdeI	CTNAG	4 cut(s)	488, 702, 1035, 1053
DinI	GGCGCC	2 cut(s)	28, 933
DpnI	GATC	2 cut(s)	354, 711
DpnII	GATC	2 cut(s)	352, 709
DraI	TTTAAA	1 cut(s)	462
EaeI	YGGCCR	1 cut(s)	522
Eam1104I	CTCTTC	1 cut(s)	20
EarI	CTCTTC	1 cut(s)	20
Eco130I	CCWWGG	1 cut(s)	1199
Eco147I	AGGCCT	1 cut(s)	574
Eco24I	GRGCYC	1 cut(s)	1022
Eco31I	GGTCTC	1 cut(s)	424
Eco32I	GATATC	1 cut(s)	892
Eco47I	GGWCC	1 cut(s)	139
Eco57I	CTGAAG	3 cut(s)	306, 522, 921
Eco88I	CYCGRG	2 cut(s)	425, 566
EcoRII	CCWGG	3 cut(s)	233, 433, 1288
EcoRV	GATATC	1 cut(s)	892
EcoT14I	CCWWGG	1 cut(s)	1199
EcoT38I	GRGCYC	1 cut(s)	1022
EgeI	GGCGCC	2 cut(s)	28, 933
EheI	GGCGCC	2 cut(s)	28, 933
ErhI	CCWWGG	1 cut(s)	1199
FaeI	CATG	5 cut(s)	163, 331, 395, 591, 1251
FaqI	GGGAC	1 cut(s)	403
FatI	CATG	5 cut(s)	159, 327, 391, 587, 1247
FauI	CCCGC	4 cut(s)	89, 247, 270, 523
FblI	GTMKAC	1 cut(s)	72
Fnu4HI	GCNGC	6 cut(s)	30, 204, 844, 909, 975, 1311
FokI	GGATG	2 cut(s)	492, 644
FriOI	GRGCYC	1 cut(s)	1022
Fsp4HI	GCNGC	6 cut(s)	30, 204, 844, 909, 975, 1311
FspBI	CTAG	3 cut(s)	89, 363, 1200
GlaI	GCGC	5 cut(s)	28, 93, 190, 535, 933
GluI	GCNGC	6 cut(s)	30, 204, 844, 909, 975, 1311
GsuI	CTGGAG	2 cut(s)	27, 747
HaeII	RGCGCY	4 cut(s)	30, 192, 537, 935
HaeIII	GGCC	7 cut(s)	183, 238, 261, 524, 574, 857, 1129
HapII	CCGG	6 cut(s)	132, 171, 258, 267, 803, 865
HgaI	GACGC	1 cut(s)	209
HhaI	GCGC	5 cut(s)	29, 94, 191, 536, 934
Hin1I	GRCGYC	4 cut(s)	27, 201, 215, 932
Hin1II	CATG	5 cut(s)	163, 331, 395, 591, 1251
Hin6I	GCGC	5 cut(s)	27, 92, 189, 534, 932
HinP1I	GCGC	5 cut(s)	27, 92, 189, 534, 932
HincII	GTYRAC	1 cut(s)	1146
HindII	GTYRAC	1 cut(s)	1146
HinfI	GANTC	4 cut(s)	35, 416, 1107, 1331
HpaII	CCGG	6 cut(s)	132, 171, 258, 267, 803, 865
HphI	GGTGA	7 cut(s)	10, 382, 560, 638, 818, 866, 1106
Hpy166II	GTNNAC	3 cut(s)	73, 1097, 1146
Hpy188I	TCNGA	7 cut(s)	109, 139, 199, 286, 541, 580, 1330
Hpy188III	TCNNGA	4 cut(s)	328, 425, 661, 680
Hpy8I	GTNNAC	3 cut(s)	73, 1097, 1146
Hpy99I	CGWCG	4 cut(s)	182, 203, 217, 220
HpyAV	CCTTC	6 cut(s)	281, 325, 431, 585, 945, 988
HpyCH4III	ACNGT	3 cut(s)	70, 1009, 1027
HpyCH4IV	ACGT	2 cut(s)	215, 296
HpyF10VI	GCNNNNNNNGC	9 cut(s)	38, 180, 209, 248, 267, 276, 971, 1310, 1319
HpyF3I	CTNAG	4 cut(s)	488, 702, 1035, 1053
HpySE526I	ACGT	2 cut(s)	215, 296
Hsp92I	GRCGYC	4 cut(s)	27, 201, 215, 932
Hsp92II	CATG	5 cut(s)	163, 331, 395, 591, 1251
HspAI	GCGC	5 cut(s)	27, 92, 189, 534, 932
KasI	GGCGCC	2 cut(s)	26, 931
KroI	GCCGGC	1 cut(s)	170
KroNI	GCCGGC	1 cut(s)	172
Kzo9I	GATC	2 cut(s)	352, 709
LmnI	GCTCC	4 cut(s)	46, 89, 412, 1013
Lsp1109I	GCAGC	4 cut(s)	830, 895, 961, 1322
LweI	GCATC	3 cut(s)	238, 464, 482
MaeI	CTAG	3 cut(s)	89, 363, 1200
MaeII	ACGT	2 cut(s)	215, 296
MalI	GATC	2 cut(s)	354, 711
MbiI	CCGCTC	1 cut(s)	84
MboI	GATC	2 cut(s)	352, 709
MboII	GAAGA	4 cut(s)	7, 313, 347, 1084
MflI	RGATCY	2 cut(s)	352, 709
MhlI	GDGCHC	2 cut(s)	1022, 1099
MlsI	TGGCCA	1 cut(s)	524
MluCI	AATT	1 cut(s)	638
MluNI	TGGCCA	1 cut(s)	524
Mly113I	GGCGCC	2 cut(s)	27, 932
MlyI	GAGTC	1 cut(s)	425
MmeI	TCCRAC	3 cut(s)	117, 132, 222
Mox20I	TGGCCA	1 cut(s)	524
MroNI	GCCGGC	1 cut(s)	170
MscI	TGGCCA	1 cut(s)	524
MseI	TTAA	6 cut(s)	461, 501, 642, 714, 951, 1236
Msp20I	TGGCCA	1 cut(s)	524
MspA1I	CMGCKG	1 cut(s)	974
MspCI	CTTAAG	1 cut(s)	713
MspI	CCGG	6 cut(s)	132, 171, 258, 267, 803, 865
MspR9I	CCNGG	7 cut(s)	133, 235, 258, 267, 435, 804, 1290
Mva1269I	GAATGC	1 cut(s)	593
MvaI	CCWGG	3 cut(s)	235, 435, 1290
MwoI	GCNNNNNNNGC	9 cut(s)	38, 180, 209, 248, 267, 276, 971, 1310, 1319
NaeI	GCCGGC	1 cut(s)	172
NarI	GGCGCC	2 cut(s)	27, 932
NciI	CCSGG	4 cut(s)	133, 258, 267, 804
NdeII	GATC	2 cut(s)	352, 709
NgoMIV	GCCGGC	1 cut(s)	170
NlaIII	CATG	5 cut(s)	163, 331, 395, 591, 1251
NlaIV	GGNNCC	6 cut(s)	28, 141, 175, 856, 933, 1213
NmeAIII	GCCGAG	1 cut(s)	165
NspI	RCATGY	2 cut(s)	591, 1251
PagI	TCATGA	1 cut(s)	327
PceI	AGGCCT	1 cut(s)	574
PcsI	WCGNNNNNNNCGW	3 cut(s)	30, 174, 1013
PctI	GAATGC	1 cut(s)	593
PdiI	GCCGGC	1 cut(s)	172
PfeI	GAWTC	3 cut(s)	35, 1107, 1331
PflMI	CCANNNNNTGG	1 cut(s)	1289
PkrI	GCNGC	6 cut(s)	31, 205, 845, 910, 976, 1312
PleI	GAGTC	1 cut(s)	424
PluTI	GGCGCC	2 cut(s)	30, 935
PpsI	GAGTC	1 cut(s)	424
Psp6I	CCWGG	3 cut(s)	233, 433, 1288
PspGI	CCWGG	3 cut(s)	233, 433, 1288
PspN4I	GGNNCC	6 cut(s)	28, 141, 175, 856, 933, 1213
PspPI	GGNCC	4 cut(s)	139, 237, 260, 855
PstI	CTGCAG	1 cut(s)	1271
PsuI	RGATCY	2 cut(s)	352, 709
PvuII	CAGCTG	1 cut(s)	974
RsaI	GTAC	3 cut(s)	164, 295, 869
RsaNI	GTAC	3 cut(s)	163, 294, 868
SaqAI	TTAA	6 cut(s)	461, 501, 642, 714, 951, 1236
SatI	GCNGC	6 cut(s)	30, 204, 844, 909, 975, 1311
Sau3AI	GATC	2 cut(s)	352, 709
Sau96I	GGNCC	4 cut(s)	139, 237, 260, 855
SchI	GAGTC	1 cut(s)	425
ScrFI	CCNGG	7 cut(s)	133, 235, 258, 267, 435, 804, 1290
SduI	GDGCHC	2 cut(s)	1022, 1099
SfaNI	GCATC	3 cut(s)	238, 464, 482
SfcI	CTRYAG	1 cut(s)	1267
SfoI	GGCGCC	2 cut(s)	28, 933
SinI	GGWCC	1 cut(s)	139
SmlI	CTYRAG	2 cut(s)	678, 713
SmoI	CTYRAG	2 cut(s)	678, 713
Sse9I	AATT	1 cut(s)	638
SseBI	AGGCCT	1 cut(s)	574
SsiI	CCGC	7 cut(s)	30, 82, 121, 204, 240, 263, 530
SspDI	GGCGCC	2 cut(s)	26, 931
SspMI	CTAG	3 cut(s)	89, 363, 1200
StuI	AGGCCT	1 cut(s)	574
StyD4I	CCNGG	7 cut(s)	131, 233, 256, 265, 433, 802, 1288
StyI	CCWWGG	1 cut(s)	1199
TaaI	ACNGT	3 cut(s)	70, 1009, 1027
TaiI	ACGT	2 cut(s)	218, 299
TasI	AATT	1 cut(s)	638
TauI	GCSGC	2 cut(s)	32, 206
TfiI	GAWTC	3 cut(s)	35, 1107, 1331
Tru1I	TTAA	6 cut(s)	461, 501, 642, 714, 951, 1236
Tru9I	TTAA	6 cut(s)	461, 501, 642, 714, 951, 1236
TscAI	CASTG	3 cut(s)	532, 733, 1140
TseI	GCWGC	4 cut(s)	843, 908, 974, 1310
TspDTI	ATGAA	3 cut(s)	344, 744, 1085
TspGWI	ACGGA	1 cut(s)	734
TspRI	CASTG	3 cut(s)	532, 733, 1140
Van91I	CCANNNNNTGG	1 cut(s)	1289
Vha464I	CTTAAG	1 cut(s)	713
VneI	GTGCAC	1 cut(s)	1095
VpaK11BI	GGWCC	1 cut(s)	139
XapI	RAATTY	1 cut(s)	638
XceI	RCATGY	2 cut(s)	591, 1251
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1286
XmaJI	CCTAGG	1 cut(s)	1199
XmiI	GTMKAC	1 cut(s)	72
XspI	CTAG	3 cut(s)	89, 363, 1200
ZraI	GACGTC	1 cut(s)	216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.