Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000820

Physical Location & Seq

Genomic Coordinates Reverse (-)

17769877 .. 17775386

Gene Structure 5510 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032679

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGGCGAGCCATCTCTTCACCTACGGCACCGCCCAATCAGCTCCAGCTCCCACTCCTGCTCTCTCCACCGTCTACACCCCTCGCTCCCTAGCCCAATCCTACCTCTCCGACCCGACCCACCGCTACCTTTCCGCCTCGGACCCTCTCTCCACTTCCTCCATGTACCTCGCCGGCACCGACGGCCTCGGCGCTTACTCCGACGCCGCCAGAGCGACGTCGTATATGATGTCCTCCTGGCCCGCCCCCGATGTCGAACCCGGCCCGCCCGGCTTCAAACGCACCTCTGAAGCACTCTACCATCAGGCTCTTTTGGGTGCCCATAATCCGATTGGGCAAATGGAAGCTTGGTATTCAACAAATTCTTTAGCAAAGCGACCTAGATTCGAGAATACAAGCTTGCCTATTTATCCACAGAGGCCAGGAGAGAAAGATTGTGCCCACTATATGCAAACAAGAACCTGTAAATTTGGAGAGGGCTGCAAGTTTGACCATCCTATTTGGGTTCCTGATGGTGGAATCCAAGATTGGAAAGAGGTTCCACTTGTTGCTCCAAGTGAGTCCCTTCCCGAGAGACCTGGAGCACCAGATTGTCCATACTTTTTAAAAACTCAAAGATGCAAGTTTGGTCTTAGATGCAAGTTTAATCATCCAAAGGACAAACTGGCCACTGCGGGCGCTTCAGAAAATGGTGATGTTTATGCCTTACCCGAGAGGCCTTCTGAACCTGCATGTGCATTCTACTTGAAAACTGGGCAATGCAAGTATGGTGCAACCTGCAAATTTAATCACCCAAAAGACATCCAGATACCATCAGCCACTCAAGAGAATAAATCTGGCGAAACTGAGACAGATCTTAAGACGGAGGGCAGTGAAGTTGCTGTGAAGCCTCTTGTTTCATTCACTCCAGCACTATTATATAACTCCAAAGAGCTTCCTGTAAGACCGGGTGAAGCTGATTGTCCATTCTACCTGAAAACTGGAAGCTGCAAGTATGGGGCCACTTGCCGGTACAATCACCCTGATAGATATGATATCAATCCACCTGTTGCTGCAATCAGCTATCCTCTTTCGGCGCCTTCAGTTGCAGGTTTTAACATAGGAGTTGCTAATCCAGCTGCCTTCACTTATCAAACTTTGGCACAACCAACGTACTATATGAAGACTGGGGAATGCAAGTATGGTGCACAATGCAGATTCCATCACCCGATTGATAGGCCAGCAGTGGCGTTGTCAACAACAAAGCCATCTCAACAAGAAAATGTGAAGCTAACGCTTGCTGGACTTCCTAGGAGAGAGGGTGCCGTTATCTGTGTGTATTACCTTAAAACTGGCACATGCAAGTATGGTGCAACCTGCAGATTTGACCACCCACCTCCTGGCGAAGTTGTAGCAATGGCAGCTTCACAAGCAAAATCTGATTCTACTGGAGGAAAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001709 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006417 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032502 GO:0034248 GO:0034249 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0044424 GO:0044444 GO:0044464 GO:0045165 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048869 GO:0050779 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:1901363 GO:1903311 GO:1903313 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

480

Amino Acids

52.08

Weight (kDa)

8.43

Isoelectric Point (pI)

42.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH	PF00642	141 - 165	7.8e-07	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	193 - 218	2.5e-08	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	241 - 265	4.4e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	316 - 340	4.7e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH_DUS3L	PF25585	317 - 339	6.2e-07	DUS3L CCCH zinc finger domain
zf-CCCH	PF00642	384 - 402	1.8e-08	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	435 - 458	4.5e-09	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf_CCCH_4	PF18345	437 - 456	1e-06	Zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12680
fragaria_vesca	FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640
malus_domestica	MD03G1280400.v1.1 MD06G1158700.v1.1 MD06G1158900.v1.1 MD06G1159100.v1.1 MD10G1219700.v1.1
prunus_persica	Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.7G013500_v2.0.a1 Prupe.8G067100_v2.0.a1
pyrus_communis	pycom06g14160 pycom06g14170 pycom10g18590
rosa_chinensis	RchiOBHm_Chr5g0022551 RchiOBHm_Chr5g0022581 RchiOBHm_Chr5g0022611 RchiOBHm_Chr5g0022711 RchiOBHm_Chr5g0022731 RchiOBHm_Chr5g0022751 RchiOBHm_Chr5g0022761 RchiOBHm_Chr5g0022841 RchiOBHm_Chr5g0022861 RchiOBHm_Chr5g0022911
rosa_laevigata	RLG00000032672 RLG00000032674 RLG00000032675 RLG00000032677 RLG00000032679 RLG00000035293
rosa_multiflora	Rmu_sc0000401.1_g000006 Rmu_sc0000401.1_g000007 Rmu_sc0000401.1_g000014 Rmu_sc0000401.1_g000026 Rmu_sc0000401.1_g000028 Rmu_sc0010181.1_g000001 Rmu_sc0010181.1_g000004 Rmu_sc0010181.1_g000009 Rmu_sc0042157.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056450 Rroxscaffold_1G00056490
rosa_rugosa	Rorug05G0075100
rosa_samantha	Rh5AG161600 Rh5BG099400 Rh5BG160400 Rh5BG160700 Rh5CG175100 Rh5DG161100 Rh5DG161300 Rh5DG161500 Rh5DG161600 Rh5DG161700 Rh5DG161900 Rh5DG162000 Rh5DG162400
rosa_wichuraiana	Rw5G014410 Rw5G014450 Rw5G014490 Rw5G014510 Rw5G014540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	218
Acc36I	ACCTGC	4 cut(s)	733, 782, 1076, 1361
AccB1I	GGYRCC	5 cut(s)	26, 173, 314, 1072, 1298
AccB7I	CCANNNNNTGG	1 cut(s)	1376
AccI	GTMKAC	1 cut(s)	72
AciI	CCGC	7 cut(s)	30, 121, 132, 204, 240, 263, 671
AcoI	YGGCCR	1 cut(s)	663
AcsI	RAATTY	3 cut(s)	358, 464, 779
AcuI	CTGAAG	3 cut(s)	306, 663, 1062
AcyI	GRCGYC	3 cut(s)	201, 215, 1073
AfaI	GTAC	3 cut(s)	164, 1010, 1151
AfiI	CCNNNNNNNGG	3 cut(s)	512, 1005, 1376
AflII	CTTAAG	1 cut(s)	854
AgsI	TTSAA	3 cut(s)	274, 354, 745
AjnI	CCWGG	4 cut(s)	233, 418, 574, 1375
AjuI	GAANNNNNNNTTGG	2 cut(s)	508, 540
Alw21I	GWGCWC	2 cut(s)	583, 1186
Alw26I	GTCTC	2 cut(s)	565, 839
Alw44I	GTGCAC	1 cut(s)	1182
Ama87I	CYCGRG	2 cut(s)	566, 707
AoxI	GGCC	8 cut(s)	181, 236, 259, 416, 663, 713, 996, 1214
ApaLI	GTGCAC	1 cut(s)	1182
ApeKI	GCWGC	5 cut(s)	477, 984, 1049, 1115, 1397
ApoI	RAATTY	3 cut(s)	358, 464, 779
AspA2I	CCTAGG	1 cut(s)	1286
AspLEI	GCGC	3 cut(s)	191, 677, 1075
AspS9I	GGNCC	4 cut(s)	139, 237, 260, 996
AsuC2I	CCSGG	3 cut(s)	258, 267, 945
AsuHPI	GGTGA	6 cut(s)	10, 701, 779, 959, 1007, 1193
AvaI	CYCGRG	2 cut(s)	566, 707
AvaII	GGWCC	1 cut(s)	139
AvrII	CCTAGG	1 cut(s)	1286
BaeGI	GKGCMC	3 cut(s)	319, 439, 1186
BalI	TGGCCA	1 cut(s)	665
BanI	GGYRCC	5 cut(s)	26, 173, 314, 1072, 1298
BbsI	GAAGAC	1 cut(s)	1166
Bbv12I	GWGCWC	2 cut(s)	583, 1186
BbvI	GCAGC	5 cut(s)	464, 971, 1036, 1102, 1409
BccI	CCATC	7 cut(s)	18, 306, 498, 503, 817, 1206, 1252
BceAI	ACGGC	3 cut(s)	40, 196, 1286
BciT130I	CCWGG	4 cut(s)	235, 420, 576, 1377
BcnI	CCSGG	3 cut(s)	258, 267, 945
BcoDI	GTCTC	2 cut(s)	565, 839
BfaI	CTAG	3 cut(s)	89, 378, 1287
BfmI	CTRYAG	1 cut(s)	1354
BfoI	RGCGCY	3 cut(s)	192, 678, 1076
BfrI	CTTAAG	1 cut(s)	854
BfuAI	ACCTGC	4 cut(s)	733, 782, 1076, 1361
BglI	GCCNNNNNGGC	1 cut(s)	267
BglII	AGATCT	1 cut(s)	850
BisI	GCNGC	6 cut(s)	204, 478, 985, 1050, 1116, 1398
BlnI	CCTAGG	1 cut(s)	1286
BlsI	GCNGC	6 cut(s)	205, 479, 986, 1051, 1117, 1399
Bme1390I	CCNGG	7 cut(s)	235, 258, 267, 420, 576, 945, 1377
Bme18I	GGWCC	1 cut(s)	139
BmeT110I	CYCGRG	2 cut(s)	566, 707
BmgT120I	GGNCC	4 cut(s)	139, 237, 260, 996
BmiI	GGNNCC	9 cut(s)	28, 141, 175, 316, 504, 537, 997, 1074, 1300
BmrFI	CCNGG	7 cut(s)	235, 258, 267, 420, 576, 945, 1377
BmrI	ACTGGG	2 cut(s)	759, 1173
BmsI	GCATC	2 cut(s)	605, 623
BmuI	ACTGGG	2 cut(s)	759, 1173
BpiI	GAAGAC	1 cut(s)	1166
BpmI	CTGGAG	3 cut(s)	27, 597, 888
BpuEI	CTTGAG	1 cut(s)	804
BpuMI	CCSGG	3 cut(s)	258, 267, 945
BsaBI	GATNNNNATC	1 cut(s)	1035
BsaHI	GRCGYC	3 cut(s)	201, 215, 1073
BsaI	GGTCTC	1 cut(s)	565
BsaJI	CCNNGG	3 cut(s)	135, 184, 1286
BsaXI	ACNNNNNCTCC	4 cut(s)	131, 161, 1282, 1312
Bsc4I	CCNNNNNNNGG	3 cut(s)	512, 1005, 1376
Bse118I	RCCGGY	2 cut(s)	170, 1005
Bse1I	ACTGG	6 cut(s)	666, 754, 982, 1168, 1333, 1429
Bse3DI	GCAATG	2 cut(s)	761, 1398
Bse8I	GATNNNNATC	1 cut(s)	1035
BseBI	CCWGG	4 cut(s)	235, 420, 576, 1377
BseDI	CCNNGG	3 cut(s)	135, 184, 1286
BseGI	GGATG	3 cut(s)	490, 646, 798
BseJI	GATNNNNATC	1 cut(s)	1035
BseLI	CCNNNNNNNGG	3 cut(s)	512, 1005, 1376
BseMI	GCAATG	2 cut(s)	761, 1398
BseMII	CTCAG	1 cut(s)	834
BseNI	ACTGG	6 cut(s)	666, 754, 982, 1168, 1333, 1429
BseSI	GKGCMC	3 cut(s)	319, 439, 1186
BseXI	GCAGC	5 cut(s)	464, 971, 1036, 1102, 1409
BshFI	GGCC	8 cut(s)	183, 238, 261, 418, 665, 715, 998, 1216
BshNI	GGYRCC	5 cut(s)	26, 173, 314, 1072, 1298
BsiHKAI	GWGCWC	2 cut(s)	583, 1186
BsiHKCI	CYCGRG	2 cut(s)	566, 707
BsiSI	CCGG	5 cut(s)	171, 258, 267, 944, 1006
BslFI	GGGAC	1 cut(s)	544
BslI	CCNNNNNNNGG	3 cut(s)	512, 1005, 1376
BsmAI	GTCTC	2 cut(s)	565, 839
BsmFI	GGGAC	1 cut(s)	544
BsmI	GAATGC	2 cut(s)	734, 1175
BsnI	GGCC	8 cut(s)	183, 238, 261, 418, 665, 715, 998, 1216
Bso31I	GGTCTC	1 cut(s)	565
BsoBI	CYCGRG	2 cut(s)	566, 707
Bsp1286I	GDGCHC	4 cut(s)	319, 439, 583, 1186
Bsp143I	GATC	1 cut(s)	850
BspACI	CCGC	7 cut(s)	30, 121, 132, 204, 240, 263, 671
BspANI	GGCC	8 cut(s)	183, 238, 261, 418, 665, 715, 998, 1216
BspCNI	CTCAG	1 cut(s)	835
BspLI	GGNNCC	9 cut(s)	28, 141, 175, 316, 504, 537, 997, 1074, 1300
BspMAI	CTGCAG	1 cut(s)	1358
BspMI	ACCTGC	4 cut(s)	733, 782, 1076, 1361
BspT107I	GGYRCC	5 cut(s)	26, 173, 314, 1072, 1298
BspTI	CTTAAG	1 cut(s)	854
BspTNI	GGTCTC	1 cut(s)	565
BsrDI	GCAATG	2 cut(s)	761, 1398
BsrFI	RCCGGY	2 cut(s)	170, 1005
BsrI	ACTGG	6 cut(s)	666, 754, 982, 1168, 1333, 1429
BssAI	RCCGGY	2 cut(s)	170, 1005
BssECI	CCNNGG	3 cut(s)	135, 184, 1286
BssMI	GATC	1 cut(s)	850
BssNI	GRCGYC	3 cut(s)	201, 215, 1073
BssT1I	CCWWGG	1 cut(s)	1286
Bst2UI	CCWGG	4 cut(s)	235, 420, 576, 1377
Bst4CI	ACNGT	1 cut(s)	70
Bst6I	CTCTTC	1 cut(s)	20
BstACI	GRCGYC	3 cut(s)	201, 215, 1073
BstAFI	CTTAAG	1 cut(s)	854
BstC8I	GCNNGC	8 cut(s)	7, 172, 240, 263, 398, 673, 1218, 1275
BstDEI	CTNAG	2 cut(s)	629, 843
BstF5I	GGATG	3 cut(s)	490, 646, 798
BstH2I	RGCGCY	3 cut(s)	192, 678, 1076
BstHHI	GCGC	3 cut(s)	191, 677, 1075
BstKTI	GATC	1 cut(s)	853
BstMAI	GTCTC	2 cut(s)	565, 839
BstMBI	GATC	1 cut(s)	850
BstMWI	GCNNNNNNNGC	8 cut(s)	38, 180, 209, 267, 276, 1112, 1397, 1406
BstNI	CCWGG	4 cut(s)	235, 420, 576, 1377
BstNSI	RCATGY	2 cut(s)	732, 1338
BstSCI	CCNGG	7 cut(s)	233, 256, 265, 418, 574, 943, 1375
BstSFI	CTRYAG	1 cut(s)	1354
BstSLI	GKGCMC	3 cut(s)	319, 439, 1186
BstV1I	GCAGC	5 cut(s)	464, 971, 1036, 1102, 1409
BstV2I	GAAGAC	1 cut(s)	1166
BstX2I	RGATCY	1 cut(s)	850
BstYI	RGATCY	1 cut(s)	850
BsuRI	GGCC	8 cut(s)	183, 238, 261, 418, 665, 715, 998, 1216
BtsCI	GGATG	3 cut(s)	490, 646, 798
BtsI	GCAGTG	3 cut(s)	666, 874, 1227
BtsIMutI	CAGTG	3 cut(s)	666, 874, 1227
BveI	ACCTGC	4 cut(s)	733, 782, 1076, 1361
Cac8I	GCNNGC	8 cut(s)	7, 172, 240, 263, 398, 673, 1218, 1275
CfoI	GCGC	3 cut(s)	191, 677, 1075
Cfr10I	RCCGGY	2 cut(s)	170, 1005
Cfr13I	GGNCC	4 cut(s)	139, 237, 260, 996
CseI	GACGC	1 cut(s)	209
Csp6I	GTAC	3 cut(s)	163, 1009, 1150
CviAII	CATG	3 cut(s)	160, 729, 1335
CviQI	GTAC	3 cut(s)	163, 1009, 1150
DdeI	CTNAG	2 cut(s)	629, 843
DinI	GGCGCC	1 cut(s)	1074
DpnI	GATC	1 cut(s)	852
DpnII	GATC	1 cut(s)	850
DraI	TTTAAA	1 cut(s)	603
EaeI	YGGCCR	1 cut(s)	663
Eam1104I	CTCTTC	1 cut(s)	20
EarI	CTCTTC	1 cut(s)	20
EciI	GGCGGA	1 cut(s)	121
Eco130I	CCWWGG	1 cut(s)	1286
Eco147I	AGGCCT	1 cut(s)	715
Eco31I	GGTCTC	1 cut(s)	565
Eco32I	GATATC	1 cut(s)	1033
Eco47I	GGWCC	1 cut(s)	139
Eco57I	CTGAAG	3 cut(s)	306, 663, 1062
Eco88I	CYCGRG	2 cut(s)	566, 707
EcoRII	CCWGG	4 cut(s)	233, 418, 574, 1375
EcoRV	GATATC	1 cut(s)	1033
EcoT14I	CCWWGG	1 cut(s)	1286
EgeI	GGCGCC	1 cut(s)	1074
EheI	GGCGCC	1 cut(s)	1074
ErhI	CCWWGG	1 cut(s)	1286
FaeI	CATG	3 cut(s)	163, 732, 1338
FaqI	GGGAC	1 cut(s)	544
FatI	CATG	3 cut(s)	159, 728, 1334
FauI	CCCGC	3 cut(s)	247, 270, 664
FblI	GTMKAC	1 cut(s)	72
Fnu4HI	GCNGC	6 cut(s)	204, 478, 985, 1050, 1116, 1398
FokI	GGATG	3 cut(s)	477, 633, 785
Fsp4HI	GCNGC	6 cut(s)	204, 478, 985, 1050, 1116, 1398
FspBI	CTAG	3 cut(s)	89, 378, 1287
GlaI	GCGC	3 cut(s)	190, 676, 1074
GluI	GCNGC	6 cut(s)	204, 478, 985, 1050, 1116, 1398
GsuI	CTGGAG	3 cut(s)	27, 597, 888
HaeII	RGCGCY	3 cut(s)	192, 678, 1076
HaeIII	GGCC	8 cut(s)	183, 238, 261, 418, 665, 715, 998, 1216
HapII	CCGG	5 cut(s)	171, 258, 267, 944, 1006
HgaI	GACGC	1 cut(s)	209
HhaI	GCGC	3 cut(s)	191, 677, 1075
Hin1I	GRCGYC	3 cut(s)	201, 215, 1073
Hin1II	CATG	3 cut(s)	163, 732, 1338
Hin6I	GCGC	3 cut(s)	189, 675, 1073
HinP1I	GCGC	3 cut(s)	189, 675, 1073
HincII	GTYRAC	1 cut(s)	1233
HindII	GTYRAC	1 cut(s)	1233
HindIII	AAGCTT	2 cut(s)	342, 394
HinfI	GANTC	5 cut(s)	381, 516, 557, 1194, 1418
HpaII	CCGG	5 cut(s)	171, 258, 267, 944, 1006
HphI	GGTGA	6 cut(s)	10, 701, 779, 959, 1007, 1193
Hpy166II	GTNNAC	3 cut(s)	73, 1184, 1233
Hpy188I	TCNGA	8 cut(s)	109, 139, 199, 286, 327, 682, 721, 1417
Hpy188III	TCNNGA	5 cut(s)	385, 506, 566, 802, 821
Hpy8I	GTNNAC	3 cut(s)	73, 1184, 1233
Hpy99I	CGWCG	4 cut(s)	182, 203, 217, 220
HpyAV	CCTTC	4 cut(s)	572, 726, 1086, 1129
HpyCH4III	ACNGT	1 cut(s)	70
HpyCH4IV	ACGT	2 cut(s)	215, 1148
HpyF10VI	GCNNNNNNNGC	8 cut(s)	38, 180, 209, 267, 276, 1112, 1397, 1406
HpyF3I	CTNAG	2 cut(s)	629, 843
HpySE526I	ACGT	2 cut(s)	215, 1148
Hsp92I	GRCGYC	3 cut(s)	201, 215, 1073
Hsp92II	CATG	3 cut(s)	163, 732, 1338
HspAI	GCGC	3 cut(s)	189, 675, 1073
KasI	GGCGCC	1 cut(s)	1072
KroI	GCCGGC	1 cut(s)	170
KroNI	GCCGGC	1 cut(s)	172
Kzo9I	GATC	1 cut(s)	850
LmnI	GCTCC	5 cut(s)	46, 52, 89, 553, 578
Lsp1109I	GCAGC	5 cut(s)	464, 971, 1036, 1102, 1409
LweI	GCATC	2 cut(s)	605, 623
MaeI	CTAG	3 cut(s)	89, 378, 1287
MaeII	ACGT	2 cut(s)	215, 1148
MalI	GATC	1 cut(s)	852
MboI	GATC	1 cut(s)	850
MboII	GAAGA	2 cut(s)	7, 1171
MflI	RGATCY	1 cut(s)	850
MhlI	GDGCHC	4 cut(s)	319, 439, 583, 1186
MlsI	TGGCCA	1 cut(s)	665
MluCI	AATT	3 cut(s)	358, 464, 779
MluNI	TGGCCA	1 cut(s)	665
Mly113I	GGCGCC	1 cut(s)	1073
MlyI	GAGTC	1 cut(s)	566
MmeI	TCCRAC	2 cut(s)	132, 222
Mox20I	TGGCCA	1 cut(s)	665
MroNI	GCCGGC	1 cut(s)	170
MscI	TGGCCA	1 cut(s)	665
MseI	TTAA	6 cut(s)	602, 642, 783, 855, 1092, 1323
Msp20I	TGGCCA	1 cut(s)	665
MspA1I	CMGCKG	1 cut(s)	1115
MspCI	CTTAAG	1 cut(s)	854
MspI	CCGG	5 cut(s)	171, 258, 267, 944, 1006
MspR9I	CCNGG	7 cut(s)	235, 258, 267, 420, 576, 945, 1377
Mva1269I	GAATGC	2 cut(s)	734, 1175
MvaI	CCWGG	4 cut(s)	235, 420, 576, 1377
MwoI	GCNNNNNNNGC	8 cut(s)	38, 180, 209, 267, 276, 1112, 1397, 1406
NaeI	GCCGGC	1 cut(s)	172
NarI	GGCGCC	1 cut(s)	1073
NciI	CCSGG	3 cut(s)	258, 267, 945
NdeII	GATC	1 cut(s)	850
NgoMIV	GCCGGC	1 cut(s)	170
NlaIII	CATG	3 cut(s)	163, 732, 1338
NlaIV	GGNNCC	9 cut(s)	28, 141, 175, 316, 504, 537, 997, 1074, 1300
NmeAIII	GCCGAG	1 cut(s)	165
NspI	RCATGY	2 cut(s)	732, 1338
PceI	AGGCCT	1 cut(s)	715
PcsI	WCGNNNNNNNCGW	1 cut(s)	174
PctI	GAATGC	2 cut(s)	734, 1175
PdiI	GCCGGC	1 cut(s)	172
PfeI	GAWTC	4 cut(s)	381, 516, 1194, 1418
PflMI	CCANNNNNTGG	1 cut(s)	1376
PkrI	GCNGC	6 cut(s)	205, 479, 986, 1051, 1117, 1399
PleI	GAGTC	1 cut(s)	565
PluTI	GGCGCC	1 cut(s)	1076
PpsI	GAGTC	1 cut(s)	565
Psp6I	CCWGG	4 cut(s)	233, 418, 574, 1375
PspGI	CCWGG	4 cut(s)	233, 418, 574, 1375
PspN4I	GGNNCC	9 cut(s)	28, 141, 175, 316, 504, 537, 997, 1074, 1300
PspPI	GGNCC	4 cut(s)	139, 237, 260, 996
PstI	CTGCAG	1 cut(s)	1358
PsuI	RGATCY	1 cut(s)	850
PvuII	CAGCTG	1 cut(s)	1115
RsaI	GTAC	3 cut(s)	164, 1010, 1151
RsaNI	GTAC	3 cut(s)	163, 1009, 1150
SaqAI	TTAA	6 cut(s)	602, 642, 783, 855, 1092, 1323
SatI	GCNGC	6 cut(s)	204, 478, 985, 1050, 1116, 1398
Sau3AI	GATC	1 cut(s)	850
Sau96I	GGNCC	4 cut(s)	139, 237, 260, 996
SchI	GAGTC	1 cut(s)	566
ScrFI	CCNGG	7 cut(s)	235, 258, 267, 420, 576, 945, 1377
SduI	GDGCHC	4 cut(s)	319, 439, 583, 1186
SfaNI	GCATC	2 cut(s)	605, 623
SfcI	CTRYAG	1 cut(s)	1354
SfoI	GGCGCC	1 cut(s)	1074
SinI	GGWCC	1 cut(s)	139
SmlI	CTYRAG	2 cut(s)	819, 854
SmoI	CTYRAG	2 cut(s)	819, 854
Sse9I	AATT	3 cut(s)	358, 464, 779
SseBI	AGGCCT	1 cut(s)	715
SsiI	CCGC	7 cut(s)	30, 121, 132, 204, 240, 263, 671
SspDI	GGCGCC	1 cut(s)	1072
SspMI	CTAG	3 cut(s)	89, 378, 1287
StuI	AGGCCT	1 cut(s)	715
StyD4I	CCNGG	7 cut(s)	233, 256, 265, 418, 574, 943, 1375
StyI	CCWWGG	1 cut(s)	1286
TaaI	ACNGT	1 cut(s)	70
TaiI	ACGT	2 cut(s)	218, 1151
TaqI	TCGA	2 cut(s)	252, 384
TasI	AATT	3 cut(s)	358, 464, 779
TauI	GCSGC	1 cut(s)	206
TfiI	GAWTC	4 cut(s)	381, 516, 1194, 1418
Tru1I	TTAA	6 cut(s)	602, 642, 783, 855, 1092, 1323
Tru9I	TTAA	6 cut(s)	602, 642, 783, 855, 1092, 1323
TscAI	CASTG	3 cut(s)	673, 874, 1227
TseI	GCWGC	5 cut(s)	477, 984, 1049, 1115, 1397
TspDTI	ATGAA	2 cut(s)	885, 1172
TspGWI	ACGGA	1 cut(s)	875
TspRI	CASTG	3 cut(s)	673, 874, 1227
Van91I	CCANNNNNTGG	1 cut(s)	1376
Vha464I	CTTAAG	1 cut(s)	854
VneI	GTGCAC	1 cut(s)	1182
VpaK11BI	GGWCC	1 cut(s)	139
XapI	RAATTY	3 cut(s)	358, 464, 779
XceI	RCATGY	2 cut(s)	732, 1338
XcmI	CCANNNNNNNNNTGG	2 cut(s)	326, 1373
XmaJI	CCTAGG	1 cut(s)	1286
XmiI	GTMKAC	1 cut(s)	72
XspI	CTAG	3 cut(s)	89, 378, 1287
ZraI	GACGTC	1 cut(s)	216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.