Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000820

Physical Location & Seq

Genomic Coordinates Reverse (-)

17451044 .. 17456592

Gene Structure 5549 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G014510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1368 bp

ATGGCGAGCCATCTCTTCACCTACGGCGCCGCCCAATCAGCTCCAGCTCCCACTCCTTCTCTCTCCACCCTCTCCGACCCGGCCCACCGCTACCTTTCCGGGTCGGACCCTCTCTCCACCTCCTCCATGTACCTCTCCGGAACCGACGGCCTCGTCGCTTACTCCGACGTCGCCAGAGCGACGTCGTATATGATGTCCTCCTGGCCCGCCCCCGATGCCGAACCCTGCCCGCCGGGCTTCAAACGCACCTCTGAAGCACTCTACCATCAGGCTCTTTTGGGTGCCCATAATCCGATTGGGCAAATGGAAGCTTGGTATTCAACAAATCCTTTAGCAAAACGACCTAGATTTGAGAATACAAGCTATTGTGCCCACCATATGCAAACAAGAACCTGTAAATTTGGAGAGGGCTGCAAGTTTGACCATCCTATTTGGGTTCCTGATGGTGGAATCCCAGATTGGAAAGAGTACTTTCTAAAAACTCAAAGATGCAAGTTTGGTCTTAGATGCAAGTTTAATCATCCAAAGGACAAACTGGCTACTGCGTGTGCGTCAGAAAATGGTGATGTTTATGCCTTACCCGAGAGGCCTTCTGAACCTGCATGTGCATTCTACTTGAAAACTGGGCAATGCAAGTATGGTGCAACCTGCAAATTTAATCACCCAAAAGACATCCAGATACCATCAGCCACTCAAGAGAATAAATCTGGCGAAACTGAGACAGATCTTAAGACGGAGGGCAGTGAAGTTGCTGTGAAGCCTCTTGTTTCATTCACTCCAGCACTATTATATAACTCCAAACAGCTTCCTGTACGACCGGGTGAAGCTGATTGTCCATTCTACCTGAAAACTGGAAGCTGCAAGTATGGGGCCACTTGCCGGTACGATCACCCTGATAGATATGATATCAATCCACCTGTTGCTGCAATCAGCTATCCTCTTTCAGCGCCTTCAGTTGCAGTTTTTAACATGGGAGTTGCTAATCCAGCTGCCTTCACTAATCAAACTTTGGCACAACCAACGGTAGGAGCGAGTCCTACTGTTTATCCTCAGAGGTTTGGACAGGCTGAGTGTGAATACTATATGAAGACTGGGGAATGTAAGTATGGTGCGCAATGCAGATTCCATCACCCGATTGATAGGCCAGCAGTGGCGTTGTCAACAACAAAGCCATCTCAACAAGAAAATGTGAAGCTTACGCTTGCTGGACTACCTAGGAGAGAGGGTGCCGCTATCTGTGTGTATTACCTTAAAACCGGCACATGCAAGTATGGTGCAACCTGCAGATTTGACCACCCACCTCCTGGCGAAGTTGTAGCAATGGCAGCTTCACAAGCAAAATCTGATTCTATTGGAGGAAAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001709 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006417 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032502 GO:0034248 GO:0034249 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0044424 GO:0044444 GO:0044464 GO:0045165 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048869 GO:0050779 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:1901363 GO:1903311 GO:1903313 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

455

Amino Acids

49.53

Weight (kDa)

8.4

Isoelectric Point (pI)

38.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH	PF00642	120 - 143	6.1e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	157 - 176	5.8e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	199 - 223	4.1e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	274 - 298	7.3e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH_DUS3L	PF25585	275 - 297	1.9e-06	DUS3L CCCH zinc finger domain
zf_CCCH_4	PF18345	278 - 297	1.9e-06	Zinc finger domain
zf-CCCH	PF00642	353 - 378	9.4e-11	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	411 - 434	5e-09	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf_CCCH_4	PF18345	413 - 432	9.6e-07	Zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12680
fragaria_vesca	FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640
malus_domestica	MD03G1280400.v1.1 MD06G1158700.v1.1 MD06G1158900.v1.1 MD06G1159100.v1.1 MD10G1219700.v1.1
prunus_persica	Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.7G013500_v2.0.a1 Prupe.8G067100_v2.0.a1
pyrus_communis	pycom06g14160 pycom06g14170 pycom10g18590
rosa_chinensis	RchiOBHm_Chr5g0022551 RchiOBHm_Chr5g0022581 RchiOBHm_Chr5g0022611 RchiOBHm_Chr5g0022711 RchiOBHm_Chr5g0022731 RchiOBHm_Chr5g0022751 RchiOBHm_Chr5g0022761 RchiOBHm_Chr5g0022841 RchiOBHm_Chr5g0022861 RchiOBHm_Chr5g0022911
rosa_laevigata	RLG00000032672 RLG00000032674 RLG00000032675 RLG00000032677 RLG00000032679 RLG00000035293
rosa_multiflora	Rmu_sc0000401.1_g000006 Rmu_sc0000401.1_g000007 Rmu_sc0000401.1_g000014 Rmu_sc0000401.1_g000026 Rmu_sc0000401.1_g000028 Rmu_sc0010181.1_g000001 Rmu_sc0010181.1_g000004 Rmu_sc0010181.1_g000009 Rmu_sc0042157.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056450 Rroxscaffold_1G00056490
rosa_rugosa	Rorug05G0075100
rosa_samantha	Rh5AG161600 Rh5BG099400 Rh5BG160400 Rh5BG160700 Rh5CG175100 Rh5DG161100 Rh5DG161300 Rh5DG161500 Rh5DG161600 Rh5DG161700 Rh5DG161900 Rh5DG162000 Rh5DG162400
rosa_wichuraiana	Rw5G014410 Rw5G014450 Rw5G014490 Rw5G014510 Rw5G014540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	152
AatII	GACGTC	2 cut(s)	171, 185
Acc16I	TGCGCA	1 cut(s)	1113
Acc36I	ACCTGC	3 cut(s)	607, 656, 1289
AccB1I	GGYRCC	3 cut(s)	26, 281, 1226
AccB7I	CCANNNNNTGG	1 cut(s)	1304
AccIII	TCCGGA	1 cut(s)	137
AciI	CCGC	5 cut(s)	30, 88, 207, 230, 1230
AcsI	RAATTY	2 cut(s)	398, 653
AcuI	CTGAAG	2 cut(s)	273, 936
AcyI	GRCGYC	3 cut(s)	27, 168, 182
AfaI	GTAC	4 cut(s)	131, 470, 813, 884
AfiI	CCNNNNNNNGG	4 cut(s)	446, 879, 1025, 1304
AflII	CTTAAG	1 cut(s)	728
AgsI	TTSAA	3 cut(s)	241, 321, 619
AjnI	CCWGG	2 cut(s)	200, 1303
AjuI	GAANNNNNNNTTGG	2 cut(s)	442, 474
Alw26I	GTCTC	1 cut(s)	713
Ama87I	CYCGRG	1 cut(s)	581
Aor13HI	TCCGGA	1 cut(s)	137
AoxI	GGCC	6 cut(s)	81, 148, 203, 587, 870, 1142
ApeKI	GCWGC	5 cut(s)	411, 858, 923, 989, 1325
ApoI	RAATTY	2 cut(s)	398, 653
AspA2I	CCTAGG	1 cut(s)	1214
AspLEI	GCGC	3 cut(s)	29, 949, 1114
AspS9I	GGNCC	4 cut(s)	82, 106, 204, 870
AsuC2I	CCSGG	4 cut(s)	80, 100, 234, 819
AsuHPI	GGTGA	6 cut(s)	10, 575, 653, 833, 881, 1121
AvaI	CYCGRG	1 cut(s)	581
AvaII	GGWCC	1 cut(s)	106
AvrII	CCTAGG	1 cut(s)	1214
BaeGI	GKGCMC	2 cut(s)	286, 373
BanI	GGYRCC	3 cut(s)	26, 281, 1226
BbsI	GAAGAC	1 cut(s)	1094
BbvI	GCAGC	5 cut(s)	398, 845, 910, 976, 1337
BccI	CCATC	7 cut(s)	18, 273, 432, 437, 691, 1134, 1180
BceAI	ACGGC	2 cut(s)	40, 163
BciT130I	CCWGG	2 cut(s)	202, 1305
BcnI	CCSGG	4 cut(s)	80, 100, 234, 819
BcoDI	GTCTC	1 cut(s)	713
BfaI	CTAG	2 cut(s)	345, 1215
BfmI	CTRYAG	1 cut(s)	1282
BfoI	RGCGCY	2 cut(s)	30, 950
BfrI	CTTAAG	1 cut(s)	728
BfuAI	ACCTGC	3 cut(s)	607, 656, 1289
BglI	GCCNNNNNGGC	1 cut(s)	234
BglII	AGATCT	1 cut(s)	724
BisI	GCNGC	7 cut(s)	30, 412, 859, 924, 990, 1230, 1326
BlnI	CCTAGG	1 cut(s)	1214
BlsI	GCNGC	7 cut(s)	31, 413, 860, 925, 991, 1231, 1327
BmcAI	AGTACT	1 cut(s)	470
Bme1390I	CCNGG	6 cut(s)	80, 100, 202, 234, 819, 1305
Bme18I	GGWCC	1 cut(s)	106
BmeT110I	CYCGRG	1 cut(s)	581
BmgT120I	GGNCC	4 cut(s)	82, 106, 204, 870
BmiI	GGNNCC	7 cut(s)	28, 108, 142, 283, 438, 871, 1228
BmrFI	CCNGG	6 cut(s)	80, 100, 202, 234, 819, 1305
BmrI	ACTGGG	2 cut(s)	633, 1101
BmsI	GCATC	3 cut(s)	205, 479, 497
BmuI	ACTGGG	2 cut(s)	633, 1101
BpiI	GAAGAC	1 cut(s)	1094
BpmI	CTGGAG	2 cut(s)	27, 762
BpuEI	CTTGAG	1 cut(s)	678
BpuMI	CCSGG	4 cut(s)	80, 100, 234, 819
BsaBI	GATNNNNATC	1 cut(s)	909
BsaHI	GRCGYC	3 cut(s)	27, 168, 182
BsaJI	CCNNGG	1 cut(s)	1214
BsaWI	WCCGGW	1 cut(s)	137
BsaXI	ACNNNNNCTCC	4 cut(s)	98, 128, 1210, 1240
Bsc4I	CCNNNNNNNGG	4 cut(s)	446, 879, 1025, 1304
Bse118I	RCCGGY	2 cut(s)	879, 1256
Bse1I	ACTGG	4 cut(s)	540, 628, 856, 1096
Bse3DI	GCAATG	3 cut(s)	635, 1121, 1326
Bse8I	GATNNNNATC	1 cut(s)	909
BseAI	TCCGGA	1 cut(s)	137
BseBI	CCWGG	2 cut(s)	202, 1305
BseDI	CCNNGG	1 cut(s)	1214
BseGI	GGATG	3 cut(s)	424, 520, 672
BseJI	GATNNNNATC	1 cut(s)	909
BseLI	CCNNNNNNNGG	4 cut(s)	446, 879, 1025, 1304
BseMI	GCAATG	3 cut(s)	635, 1121, 1326
BseMII	CTCAG	3 cut(s)	708, 1059, 1064
BseNI	ACTGG	4 cut(s)	540, 628, 856, 1096
BseRI	GAGGAG	1 cut(s)	112
BseSI	GKGCMC	2 cut(s)	286, 373
BseXI	GCAGC	5 cut(s)	398, 845, 910, 976, 1337
Bsh1285I	CGRYCG	1 cut(s)	818
BshFI	GGCC	6 cut(s)	83, 150, 205, 589, 872, 1144
BshNI	GGYRCC	3 cut(s)	26, 281, 1226
BsiEI	CGRYCG	1 cut(s)	818
BsiHKCI	CYCGRG	1 cut(s)	581
BsiSI	CCGG	7 cut(s)	80, 99, 138, 233, 818, 880, 1257
BslI	CCNNNNNNNGG	4 cut(s)	446, 879, 1025, 1304
BsmAI	GTCTC	1 cut(s)	713
BsmI	GAATGC	1 cut(s)	608
BsnI	GGCC	6 cut(s)	83, 150, 205, 589, 872, 1144
BsoBI	CYCGRG	1 cut(s)	581
Bsp1286I	GDGCHC	2 cut(s)	286, 373
Bsp13I	TCCGGA	1 cut(s)	137
Bsp143I	GATC	2 cut(s)	724, 886
BspACI	CCGC	5 cut(s)	30, 88, 207, 230, 1230
BspANI	GGCC	6 cut(s)	83, 150, 205, 589, 872, 1144
BspCNI	CTCAG	3 cut(s)	709, 1060, 1063
BspEI	TCCGGA	1 cut(s)	137
BspLI	GGNNCC	7 cut(s)	28, 108, 142, 283, 438, 871, 1228
BspMAI	CTGCAG	1 cut(s)	1286
BspMI	ACCTGC	3 cut(s)	607, 656, 1289
BspT107I	GGYRCC	3 cut(s)	26, 281, 1226
BspTI	CTTAAG	1 cut(s)	728
BsrDI	GCAATG	3 cut(s)	635, 1121, 1326
BsrFI	RCCGGY	2 cut(s)	879, 1256
BsrI	ACTGG	4 cut(s)	540, 628, 856, 1096
BssAI	RCCGGY	2 cut(s)	879, 1256
BssECI	CCNNGG	1 cut(s)	1214
BssMI	GATC	2 cut(s)	724, 886
BssNI	GRCGYC	3 cut(s)	27, 168, 182
BssT1I	CCWWGG	1 cut(s)	1214
Bst2UI	CCWGG	2 cut(s)	202, 1305
Bst4CI	ACNGT	2 cut(s)	1024, 1042
Bst6I	CTCTTC	1 cut(s)	20
BstACI	GRCGYC	3 cut(s)	27, 168, 182
BstAFI	CTTAAG	1 cut(s)	728
BstC8I	GCNNGC	5 cut(s)	7, 207, 230, 1146, 1203
BstDEI	CTNAG	4 cut(s)	503, 717, 1050, 1068
BstF5I	GGATG	3 cut(s)	424, 520, 672
BstH2I	RGCGCY	2 cut(s)	30, 950
BstHHI	GCGC	3 cut(s)	29, 949, 1114
BstKTI	GATC	2 cut(s)	727, 889
BstMAI	GTCTC	1 cut(s)	713
BstMBI	GATC	2 cut(s)	724, 886
BstMCI	CGRYCG	1 cut(s)	818
BstMWI	GCNNNNNNNGC	7 cut(s)	38, 215, 234, 243, 986, 1325, 1334
BstNI	CCWGG	2 cut(s)	202, 1305
BstNSI	RCATGY	2 cut(s)	606, 1266
BstSCI	CCNGG	6 cut(s)	78, 98, 200, 232, 817, 1303
BstSFI	CTRYAG	1 cut(s)	1282
BstSLI	GKGCMC	2 cut(s)	286, 373
BstV1I	GCAGC	5 cut(s)	398, 845, 910, 976, 1337
BstV2I	GAAGAC	1 cut(s)	1094
BstX2I	RGATCY	1 cut(s)	724
BstYI	RGATCY	1 cut(s)	724
BsuRI	GGCC	6 cut(s)	83, 150, 205, 589, 872, 1144
BtsCI	GGATG	3 cut(s)	424, 520, 672
BtsI	GCAGTG	2 cut(s)	748, 1155
BtsIMutI	CAGTG	2 cut(s)	748, 1155
BveI	ACCTGC	3 cut(s)	607, 656, 1289
Cac8I	GCNNGC	5 cut(s)	7, 207, 230, 1146, 1203
CfoI	GCGC	3 cut(s)	29, 949, 1114
Cfr10I	RCCGGY	2 cut(s)	879, 1256
Cfr13I	GGNCC	4 cut(s)	82, 106, 204, 870
CseI	GACGC	1 cut(s)	540
Csp6I	GTAC	4 cut(s)	130, 469, 812, 883
CviAII	CATG	4 cut(s)	127, 603, 970, 1263
CviQI	GTAC	4 cut(s)	130, 469, 812, 883
DdeI	CTNAG	4 cut(s)	503, 717, 1050, 1068
DinI	GGCGCC	1 cut(s)	28
DpnI	GATC	2 cut(s)	726, 888
DpnII	GATC	2 cut(s)	724, 886
DrdI	GACNNNNNNGTC	1 cut(s)	152
DseDI	GACNNNNNNGTC	1 cut(s)	152
Eam1104I	CTCTTC	1 cut(s)	20
EarI	CTCTTC	1 cut(s)	20
Eco130I	CCWWGG	1 cut(s)	1214
Eco147I	AGGCCT	1 cut(s)	589
Eco32I	GATATC	1 cut(s)	907
Eco47I	GGWCC	1 cut(s)	106
Eco57I	CTGAAG	2 cut(s)	273, 936
Eco88I	CYCGRG	1 cut(s)	581
EcoRII	CCWGG	2 cut(s)	200, 1303
EcoRV	GATATC	1 cut(s)	907
EcoT14I	CCWWGG	1 cut(s)	1214
EgeI	GGCGCC	1 cut(s)	28
EheI	GGCGCC	1 cut(s)	28
ErhI	CCWWGG	1 cut(s)	1214
FaeI	CATG	4 cut(s)	130, 606, 973, 1266
FatI	CATG	4 cut(s)	126, 602, 969, 1262
FauI	CCCGC	2 cut(s)	214, 237
FauNDI	CATATG	1 cut(s)	378
Fnu4HI	GCNGC	7 cut(s)	30, 412, 859, 924, 990, 1230, 1326
FokI	GGATG	3 cut(s)	411, 507, 659
Fsp4HI	GCNGC	7 cut(s)	30, 412, 859, 924, 990, 1230, 1326
FspBI	CTAG	2 cut(s)	345, 1215
FspI	TGCGCA	1 cut(s)	1113
GlaI	GCGC	3 cut(s)	28, 948, 1113
GluI	GCNGC	7 cut(s)	30, 412, 859, 924, 990, 1230, 1326
GsuI	CTGGAG	2 cut(s)	27, 762
HaeII	RGCGCY	2 cut(s)	30, 950
HaeIII	GGCC	6 cut(s)	83, 150, 205, 589, 872, 1144
HapII	CCGG	7 cut(s)	80, 99, 138, 233, 818, 880, 1257
HgaI	GACGC	1 cut(s)	540
HhaI	GCGC	3 cut(s)	29, 949, 1114
Hin1I	GRCGYC	3 cut(s)	27, 168, 182
Hin1II	CATG	4 cut(s)	130, 606, 973, 1266
Hin6I	GCGC	3 cut(s)	27, 947, 1112
HinP1I	GCGC	3 cut(s)	27, 947, 1112
HincII	GTYRAC	1 cut(s)	1161
HindII	GTYRAC	1 cut(s)	1161
HindIII	AAGCTT	2 cut(s)	309, 1193
HinfI	GANTC	4 cut(s)	450, 1033, 1122, 1346
HpaII	CCGG	7 cut(s)	80, 99, 138, 233, 818, 880, 1257
HphI	GGTGA	6 cut(s)	10, 575, 653, 833, 881, 1121
Hpy166II	GTNNAC	1 cut(s)	1161
Hpy188I	TCNGA	9 cut(s)	76, 106, 166, 253, 294, 556, 595, 1053, 1345
Hpy188III	TCNNGA	4 cut(s)	138, 440, 676, 695
Hpy8I	GTNNAC	1 cut(s)	1161
Hpy99I	CGWCG	6 cut(s)	149, 158, 170, 173, 184, 187
HpyAV	CCTTC	4 cut(s)	66, 600, 960, 1003
HpyCH4III	ACNGT	2 cut(s)	1024, 1042
HpyCH4IV	ACGT	2 cut(s)	168, 182
HpyF10VI	GCNNNNNNNGC	7 cut(s)	38, 215, 234, 243, 986, 1325, 1334
HpyF3I	CTNAG	4 cut(s)	503, 717, 1050, 1068
HpySE526I	ACGT	2 cut(s)	168, 182
Hsp92I	GRCGYC	3 cut(s)	27, 168, 182
Hsp92II	CATG	4 cut(s)	130, 606, 973, 1266
HspAI	GCGC	3 cut(s)	27, 947, 1112
KasI	GGCGCC	1 cut(s)	26
Kpn2I	TCCGGA	1 cut(s)	137
Kzo9I	GATC	2 cut(s)	724, 886
LmnI	GCTCC	3 cut(s)	46, 52, 1028
Lsp1109I	GCAGC	5 cut(s)	398, 845, 910, 976, 1337
LweI	GCATC	3 cut(s)	205, 479, 497
MaeI	CTAG	2 cut(s)	345, 1215
MaeII	ACGT	2 cut(s)	168, 182
MalI	GATC	2 cut(s)	726, 888
MboI	GATC	2 cut(s)	724, 886
MboII	GAAGA	2 cut(s)	7, 1099
MflI	RGATCY	1 cut(s)	724
MhlI	GDGCHC	2 cut(s)	286, 373
MluCI	AATT	2 cut(s)	398, 653
Mly113I	GGCGCC	1 cut(s)	27
MlyI	GAGTC	1 cut(s)	1042
MmeI	TCCRAC	3 cut(s)	84, 99, 189
MroI	TCCGGA	1 cut(s)	137
MseI	TTAA	5 cut(s)	516, 657, 729, 966, 1251
MspA1I	CMGCKG	1 cut(s)	989
MspCI	CTTAAG	1 cut(s)	728
MspI	CCGG	7 cut(s)	80, 99, 138, 233, 818, 880, 1257
MspR9I	CCNGG	6 cut(s)	80, 100, 202, 234, 819, 1305
Mva1269I	GAATGC	1 cut(s)	608
MvaI	CCWGG	2 cut(s)	202, 1305
MwoI	GCNNNNNNNGC	7 cut(s)	38, 215, 234, 243, 986, 1325, 1334
NarI	GGCGCC	1 cut(s)	27
NciI	CCSGG	4 cut(s)	80, 100, 234, 819
NdeI	CATATG	1 cut(s)	378
NdeII	GATC	2 cut(s)	724, 886
NlaIII	CATG	4 cut(s)	130, 606, 973, 1266
NlaIV	GGNNCC	7 cut(s)	28, 108, 142, 283, 438, 871, 1228
NsbI	TGCGCA	1 cut(s)	1113
NspI	RCATGY	2 cut(s)	606, 1266
PceI	AGGCCT	1 cut(s)	589
PcsI	WCGNNNNNNNCGW	2 cut(s)	162, 1028
PctI	GAATGC	1 cut(s)	608
PfeI	GAWTC	3 cut(s)	450, 1122, 1346
PflMI	CCANNNNNTGG	1 cut(s)	1304
PkrI	GCNGC	7 cut(s)	31, 413, 860, 925, 991, 1231, 1327
PleI	GAGTC	1 cut(s)	1041
PluTI	GGCGCC	1 cut(s)	30
PpsI	GAGTC	1 cut(s)	1041
Psp6I	CCWGG	2 cut(s)	200, 1303
PspGI	CCWGG	2 cut(s)	200, 1303
PspN4I	GGNNCC	7 cut(s)	28, 108, 142, 283, 438, 871, 1228
PspPI	GGNCC	4 cut(s)	82, 106, 204, 870
PstI	CTGCAG	1 cut(s)	1286
PsuI	RGATCY	1 cut(s)	724
PvuII	CAGCTG	1 cut(s)	989
RsaI	GTAC	4 cut(s)	131, 470, 813, 884
RsaNI	GTAC	4 cut(s)	130, 469, 812, 883
SaqAI	TTAA	5 cut(s)	516, 657, 729, 966, 1251
SatI	GCNGC	7 cut(s)	30, 412, 859, 924, 990, 1230, 1326
Sau3AI	GATC	2 cut(s)	724, 886
Sau96I	GGNCC	4 cut(s)	82, 106, 204, 870
ScaI	AGTACT	1 cut(s)	470
SchI	GAGTC	1 cut(s)	1042
ScrFI	CCNGG	6 cut(s)	80, 100, 202, 234, 819, 1305
SduI	GDGCHC	2 cut(s)	286, 373
SfaNI	GCATC	3 cut(s)	205, 479, 497
SfcI	CTRYAG	1 cut(s)	1282
SfoI	GGCGCC	1 cut(s)	28
SinI	GGWCC	1 cut(s)	106
SmlI	CTYRAG	2 cut(s)	693, 728
SmoI	CTYRAG	2 cut(s)	693, 728
Sse9I	AATT	2 cut(s)	398, 653
SseBI	AGGCCT	1 cut(s)	589
SsiI	CCGC	5 cut(s)	30, 88, 207, 230, 1230
SspDI	GGCGCC	1 cut(s)	26
SspMI	CTAG	2 cut(s)	345, 1215
StuI	AGGCCT	1 cut(s)	589
StyD4I	CCNGG	6 cut(s)	78, 98, 200, 232, 817, 1303
StyI	CCWWGG	1 cut(s)	1214
TaaI	ACNGT	2 cut(s)	1024, 1042
TaiI	ACGT	2 cut(s)	171, 185
TasI	AATT	2 cut(s)	398, 653
TatI	WGTACW	1 cut(s)	468
TauI	GCSGC	2 cut(s)	32, 1232
TfiI	GAWTC	3 cut(s)	450, 1122, 1346
Tru1I	TTAA	5 cut(s)	516, 657, 729, 966, 1251
Tru9I	TTAA	5 cut(s)	516, 657, 729, 966, 1251
TscAI	CASTG	2 cut(s)	748, 1155
TseI	GCWGC	5 cut(s)	411, 858, 923, 989, 1325
TspDTI	ATGAA	2 cut(s)	759, 1100
TspGWI	ACGGA	1 cut(s)	749
TspRI	CASTG	2 cut(s)	748, 1155
Van91I	CCANNNNNTGG	1 cut(s)	1304
Vha464I	CTTAAG	1 cut(s)	728
VpaK11BI	GGWCC	1 cut(s)	106
XapI	RAATTY	2 cut(s)	398, 653
XceI	RCATGY	2 cut(s)	606, 1266
XcmI	CCANNNNNNNNNTGG	2 cut(s)	293, 1301
XmaJI	CCTAGG	1 cut(s)	1214
XspI	CTAG	2 cut(s)	345, 1215
ZraI	GACGTC	2 cut(s)	169, 183
ZrmI	AGTACT	1 cut(s)	470

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.