Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000401.1

Orthogroup ID

OG0000820

Physical Location & Seq

Genomic Coordinates Reverse (-)

21086 .. 30779

Gene Structure 9694 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000401.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

atggaaagaaacagattccggtttatgagttcatttgcgtttattaatagagtgggaacaaagaaacagattccggtttatgatcttggaggcaatagatttactggaagcatacctttacagacaagatcaattgtatcatctgaattgtatatgctaagattgcgatccaactctttaagcggacatatccccagtcgattgtgctctcttcgatatcttcatatcatagaccttggccacaacaacttttcagggaccattcccaagtgtttgcataatttgactgctttcgcccatggtaatttgacttcttttgaccaccgtgattactcctatttgggcagttattttgagacggcctgcttgacattgaagggacaagaactcgactatgacaggactctgaatttggtgaatagcattgatttctcatcaaacaacttagaaggtgaaatccctgacgaagtaagcagcctcattggattgggcacgttgaacttgtcaagaaatcaactgactggaaacattccctcaaagattggaaacttgcaattgctggaaactcttgatctctcacacaatcacctctccgggcagattcctcaaagtttatcttcattaacctctctgtctcacttgaacttgtctttcaacaacttgtccggaagaattccttcaggcaaccaacttcaaacactgaatgattcatccatttacgaaggcaatccatacttgtgtggggtccctctttcaactgtctgcccgggagatggcgcagctgaccctgacgatggtgatcataatgatgatgatgggaagtttggtatcgttgttagcgctgtcctcggcttcatcataggcttctggagtgtgtgtggcacattggtgctctccatgacactgccctttggagctgtttgtggcgctggtgaagatgacggcccacgctacttttctgggtcgaccctctctccacttcctccatgtacctcgccggcaccgacggcctcggccgctagagcgacgtcgtatatgatgtcctcctggccctccccggatgccgaacccggcccgcccggcttcaaacgcacctctgaagtattatatgaagattgggaatgtaagtatggtgcacaatgcagattccatcacccgattgataggccagcagtggcgttgtcaacagcaaagctatctcaacaagaaaatgtgaagctaacgcttgctggactacctaggagggagtttccattttacaccgagattgactctgtaccgccaccgccacgtgctcctccaaccctggataagcaaagagagggttcggatttgcagacgctgctccggagattctggaagagaggcggtgccgtactggtcctccgacgacaaggtccaggtcaggatgcagctgggaggagtcttccttctcatctcgccaccaccgggatcagcgtcggcttcaattttctgggtcgggacttccacaatgcccttgccaataaggaccaggagcaattcacgaagcaactgctttactacctgggtgcctttgctggtggaattccgtattatatgaagactggagaatgtaagtatggtgcacaatgcagattccatcacccaattgataggccagcagtggcattgtcaacaacaaagccatctcaacaagaaaatgtgaagctaacgcttgctggactacctaggagagagggtgccgttatctatgtgtattaccttaaaaccggcgcatgcaagtatggtgcaacctgcagatttgaccacccacctcctggcgaagttgtagcaatggcagcttcacaaggaaaatctgattctaccggagggaaagcataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0007275 GO:0007389 GO:0008150 GO:0009505 GO:0009531 GO:0009553 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0010154 GO:0010453 GO:0022414 GO:0022603 GO:0030312 GO:0032501 GO:0032502 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045595 GO:0048226 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051302 GO:0061458 GO:0065001 GO:0065007 GO:0071944 GO:0090558 GO:0090708 GO:0099402 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

620

Amino Acids

67.54

Weight (kDa)

7.88

Isoelectric Point (pI)

48.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12680
fragaria_vesca	FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640
malus_domestica	MD03G1280400.v1.1 MD06G1158700.v1.1 MD06G1158900.v1.1 MD06G1159100.v1.1 MD10G1219700.v1.1
prunus_persica	Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.7G013500_v2.0.a1 Prupe.8G067100_v2.0.a1
pyrus_communis	pycom06g14160 pycom06g14170 pycom10g18590
rosa_chinensis	RchiOBHm_Chr5g0022551 RchiOBHm_Chr5g0022581 RchiOBHm_Chr5g0022611 RchiOBHm_Chr5g0022711 RchiOBHm_Chr5g0022731 RchiOBHm_Chr5g0022751 RchiOBHm_Chr5g0022761 RchiOBHm_Chr5g0022841 RchiOBHm_Chr5g0022861 RchiOBHm_Chr5g0022911
rosa_laevigata	RLG00000032672 RLG00000032674 RLG00000032675 RLG00000032677 RLG00000032679 RLG00000035293
rosa_multiflora	Rmu_sc0000401.1_g000006 Rmu_sc0000401.1_g000007 Rmu_sc0000401.1_g000014 Rmu_sc0000401.1_g000026 Rmu_sc0000401.1_g000028 Rmu_sc0010181.1_g000001 Rmu_sc0010181.1_g000004 Rmu_sc0010181.1_g000009 Rmu_sc0042157.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056450 Rroxscaffold_1G00056490
rosa_rugosa	Rorug05G0075100
rosa_samantha	Rh5AG161600 Rh5BG099400 Rh5BG160400 Rh5BG160700 Rh5CG175100 Rh5DG161100 Rh5DG161300 Rh5DG161500 Rh5DG161600 Rh5DG161700 Rh5DG161900 Rh5DG162000 Rh5DG162400
rosa_wichuraiana	Rw5G014410 Rw5G014450 Rw5G014490 Rw5G014510 Rw5G014540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1395
AatII	GACGTC	1 cut(s)	1031
Acc36I	ACCTGC	1 cut(s)	1784
AccB1I	GGYRCC	4 cut(s)	1000, 1370, 1550, 1721
AccB7I	CCANNNNNTGG	1 cut(s)	1799
AccI	GTMKAC	1 cut(s)	965
AccIII	TCCGGA	2 cut(s)	665, 1347
AciI	CCGC	6 cut(s)	183, 1017, 1076, 1280, 1286, 1368
AclWI	GGATC	2 cut(s)	162, 1460
AcoI	YGGCCR	2 cut(s)	238, 1014
AcsI	RAATTY	3 cut(s)	409, 672, 1566
AcuI	CTGAAG	2 cut(s)	663, 1119
AcvI	CACGTG	1 cut(s)	1292
AcyI	GRCGYC	1 cut(s)	1028
AfaI	GTAC	3 cut(s)	991, 1278, 1377
AfeI	AGCGCT	1 cut(s)	841
AfiI	CCNNNNNNNGG	4 cut(s)	773, 794, 1449, 1799
AgsI	TTSAA	8 cut(s)	376, 499, 643, 655, 695, 756, 1087, 1468
AjnI	CCWGG	6 cut(s)	1046, 1305, 1399, 1512, 1545, 1798
AleI	CACNNNNGTG	1 cut(s)	887
AluBI	AGCT	7 cut(s)	782, 917, 1195, 1219, 1415, 1690, 1823
AluI	AGCT	7 cut(s)	782, 917, 1195, 1219, 1415, 1690, 1823
Alw21I	GWGCWC	5 cut(s)	209, 894, 1138, 1297, 1609
Alw26I	GTCTC	2 cut(s)	350, 639
Alw44I	GTGCAC	2 cut(s)	1134, 1605
AlwI	GGATC	2 cut(s)	162, 1460
AlwNI	CAGNNNCTG	1 cut(s)	1342
Ama87I	CYCGRG	1 cut(s)	766
Aor13HI	TCCGGA	2 cut(s)	665, 1347
Aor51HI	AGCGCT	1 cut(s)	841
AoxI	GGCC	9 cut(s)	238, 360, 943, 1008, 1014, 1049, 1072, 1166, 1637
ApaLI	GTGCAC	2 cut(s)	1134, 1605
ApeKI	GCWGC	5 cut(s)	474, 779, 1342, 1412, 1820
ApoI	RAATTY	3 cut(s)	409, 672, 1566
ArsI	GACNNNNNNTTYG	2 cut(s)	394, 426
AseI	ATTAAT	1 cut(s)	45
Asp700I	GAANNNNTTC	1 cut(s)	676
AspA2I	CCTAGG	2 cut(s)	1238, 1709
AspLEI	GCGC	4 cut(s)	779, 842, 929, 1757
AspS9I	GGNCC	8 cut(s)	258, 745, 944, 1050, 1073, 1381, 1397, 1510
AsuC2I	CCSGG	7 cut(s)	595, 767, 768, 1058, 1071, 1080, 1450
AsuHPI	GGTGA	7 cut(s)	427, 464, 578, 809, 944, 1145, 1616
AvaI	CYCGRG	1 cut(s)	766
AvaII	GGWCC	5 cut(s)	258, 745, 1381, 1397, 1510
AvrII	CCTAGG	2 cut(s)	1238, 1709
BaeGI	GKGCMC	3 cut(s)	494, 1138, 1609
BalI	TGGCCA	1 cut(s)	240
BanI	GGYRCC	4 cut(s)	1000, 1370, 1550, 1721
BarI	GAAGNNNNNNTAC	2 cut(s)	295, 327
BbrPI	CACGTG	1 cut(s)	1292
BbsI	GAAGAC	2 cut(s)	1418, 1589
Bbv12I	GWGCWC	5 cut(s)	209, 894, 1138, 1297, 1609
BbvI	GCAGC	5 cut(s)	486, 791, 1329, 1424, 1832
BccI	CCATC	6 cut(s)	767, 788, 809, 1158, 1629, 1675
BceAI	ACGGC	5 cut(s)	375, 958, 1023, 1358, 1709
BcgI	CGANNNNNNTGC	2 cut(s)	1516, 1550
BciT130I	CCWGG	6 cut(s)	1048, 1307, 1401, 1514, 1547, 1800
BclI	TGATCA	1 cut(s)	799
BcnI	CCSGG	7 cut(s)	595, 767, 768, 1058, 1071, 1080, 1450
BcoDI	GTCTC	2 cut(s)	350, 639
BfaI	CTAG	3 cut(s)	1020, 1239, 1710
BfmI	CTRYAG	1 cut(s)	1777
BfoI	RGCGCY	2 cut(s)	843, 930
BfuAI	ACCTGC	1 cut(s)	1784
BglI	GCCNNNNNGGC	1 cut(s)	1080
BisI	GCNGC	6 cut(s)	475, 780, 1017, 1343, 1413, 1821
BlnI	CCTAGG	2 cut(s)	1238, 1709
BlsI	GCNGC	6 cut(s)	476, 781, 1018, 1344, 1414, 1822
Bme18I	GGWCC	5 cut(s)	258, 745, 1381, 1397, 1510
BmeT110I	CYCGRG	1 cut(s)	766
BmgT120I	GGNCC	8 cut(s)	258, 745, 944, 1050, 1073, 1381, 1397, 1510
BmiI	GGNNCC	7 cut(s)	259, 746, 747, 1002, 1372, 1552, 1723
BmrI	ACTGGG	1 cut(s)	189
BmsI	GCATC	2 cut(s)	1051, 1399
BmuI	ACTGGG	1 cut(s)	189
BpiI	GAAGAC	2 cut(s)	1418, 1589
BplI	GAGNNNNNCTC	2 cut(s)	1256, 1288
BpmI	CTGGAG	2 cut(s)	889, 1608
BpuMI	CCSGG	7 cut(s)	595, 767, 768, 1058, 1071, 1080, 1450
BsaAI	YACGTR	1 cut(s)	1292
BsaBI	GATNNNNATC	2 cut(s)	166, 798
BsaHI	GRCGYC	1 cut(s)	1028
BsaWI	WCCGGW	5 cut(s)	18, 73, 665, 1347, 1847
BsaXI	ACNNNNNCTCC	8 cut(s)	862, 892, 958, 988, 1368, 1398, 1705, 1735
Bsc4I	CCNNNNNNNGG	4 cut(s)	773, 794, 1449, 1799
Bse118I	RCCGGY	2 cut(s)	997, 1751
Bse1I	ACTGG	5 cut(s)	109, 195, 526, 1383, 1591
Bse3DI	GCAATG	1 cut(s)	1821
Bse8I	GATNNNNATC	2 cut(s)	166, 798
BseAI	TCCGGA	2 cut(s)	665, 1347
BseBI	CCWGG	6 cut(s)	1048, 1307, 1401, 1514, 1547, 1800
BseGI	GGATG	3 cut(s)	710, 1066, 1414
BseJI	GATNNNNATC	2 cut(s)	166, 798
BseLI	CCNNNNNNNGG	4 cut(s)	773, 794, 1449, 1799
BseMI	GCAATG	1 cut(s)	1821
BseNI	ACTGG	5 cut(s)	109, 195, 526, 1383, 1591
BseRI	GAGGAG	2 cut(s)	1287, 1435
BseSI	GKGCMC	3 cut(s)	494, 1138, 1609
BseX3I	CGGCCG	1 cut(s)	1014
BseXI	GCAGC	5 cut(s)	486, 791, 1329, 1424, 1832
BseYI	CCCAGC	1 cut(s)	1415
Bsh1285I	CGRYCG	1 cut(s)	1017
BshFI	GGCC	9 cut(s)	240, 362, 945, 1010, 1016, 1051, 1074, 1168, 1639
BshNI	GGYRCC	4 cut(s)	1000, 1370, 1550, 1721
BsiEI	CGRYCG	1 cut(s)	1017
BsiHKAI	GWGCWC	5 cut(s)	209, 894, 1138, 1297, 1609
BsiHKCI	CYCGRG	1 cut(s)	766
BslFI	GGGAC	4 cut(s)	271, 393, 731, 1496
BslI	CCNNNNNNNGG	4 cut(s)	773, 794, 1449, 1799
BsmAI	GTCTC	2 cut(s)	350, 639
BsmBI	CGTCTC	1 cut(s)	350
BsmFI	GGGAC	4 cut(s)	271, 393, 731, 1496
BsnI	GGCC	9 cut(s)	240, 362, 945, 1010, 1016, 1051, 1074, 1168, 1639
BsoBI	CYCGRG	1 cut(s)	766
Bsp1286I	GDGCHC	6 cut(s)	209, 494, 894, 1138, 1297, 1609
Bsp13I	TCCGGA	2 cut(s)	665, 1347
Bsp143I	GATC	6 cut(s)	82, 128, 167, 571, 799, 1452
Bsp19I	CCATGG	1 cut(s)	298
BspACI	CCGC	6 cut(s)	183, 1017, 1076, 1280, 1286, 1368
BspANI	GGCC	9 cut(s)	240, 362, 945, 1010, 1016, 1051, 1074, 1168, 1639
BspEI	TCCGGA	2 cut(s)	665, 1347
BspLI	GGNNCC	7 cut(s)	259, 746, 747, 1002, 1372, 1552, 1723
BspMAI	CTGCAG	1 cut(s)	1781
BspMI	ACCTGC	1 cut(s)	1784
BspPI	GGATC	2 cut(s)	162, 1460
BspT107I	GGYRCC	4 cut(s)	1000, 1370, 1550, 1721
BsrDI	GCAATG	1 cut(s)	1821
BsrFI	RCCGGY	2 cut(s)	997, 1751
BsrI	ACTGG	5 cut(s)	109, 195, 526, 1383, 1591
BssAI	RCCGGY	2 cut(s)	997, 1751
BssMI	GATC	6 cut(s)	82, 128, 167, 571, 799, 1452
BssNI	GRCGYC	1 cut(s)	1028
BssT1I	CCWWGG	4 cut(s)	235, 298, 1238, 1709
Bst2UI	CCWGG	6 cut(s)	1048, 1307, 1401, 1514, 1547, 1800
Bst4CI	ACNGT	2 cut(s)	326, 760
Bst6I	CTCTTC	2 cut(s)	216, 1355
BstACI	GRCGYC	1 cut(s)	1028
BstAPI	GCANNNNNTGC	1 cut(s)	1342
BstBAI	YACGTR	1 cut(s)	1292
BstC8I	GCNNGC	8 cut(s)	364, 999, 1076, 1170, 1227, 1641, 1698, 1759
BstDEI	CTNAG	2 cut(s)	158, 445
BstDSI	CCRYGG	1 cut(s)	298
BstF5I	GGATG	3 cut(s)	710, 1066, 1414
BstH2I	RGCGCY	2 cut(s)	843, 930
BstHHI	GCGC	4 cut(s)	779, 842, 929, 1757
BstKTI	GATC	6 cut(s)	85, 131, 170, 574, 802, 1455
BstMAI	GTCTC	2 cut(s)	350, 639
BstMBI	GATC	6 cut(s)	82, 128, 167, 571, 799, 1452
BstMCI	CGRYCG	1 cut(s)	1017
BstMWI	GCNNNNNNNGC	8 cut(s)	163, 1007, 1016, 1022, 1080, 1089, 1342, 1820
BstNI	CCWGG	6 cut(s)	1048, 1307, 1401, 1514, 1547, 1800
BstNSI	RCATGY	1 cut(s)	1761
BstSFI	CTRYAG	1 cut(s)	1777
BstSLI	GKGCMC	3 cut(s)	494, 1138, 1609
BstV1I	GCAGC	5 cut(s)	486, 791, 1329, 1424, 1832
BstV2I	GAAGAC	2 cut(s)	1418, 1589
BstZI	CGGCCG	1 cut(s)	1014
BsuRI	GGCC	9 cut(s)	240, 362, 945, 1010, 1016, 1051, 1074, 1168, 1639
BtgI	CCRYGG	1 cut(s)	298
BtsCI	GGATG	3 cut(s)	710, 1066, 1414
BtsI	GCAGTG	3 cut(s)	902, 1179, 1650
BtsIMutI	CAGTG	4 cut(s)	698, 902, 1179, 1650
BveI	ACCTGC	1 cut(s)	1784
Cac8I	GCNNGC	8 cut(s)	364, 999, 1076, 1170, 1227, 1641, 1698, 1759
CaiI	CAGNNNCTG	1 cut(s)	1342
CfoI	GCGC	4 cut(s)	779, 842, 929, 1757
Cfr10I	RCCGGY	2 cut(s)	997, 1751
Cfr13I	GGNCC	8 cut(s)	258, 745, 944, 1050, 1073, 1381, 1397, 1510
Cfr9I	CCCGGG	1 cut(s)	766
CseI	GACGC	2 cut(s)	1348, 1447
Csp6I	GTAC	3 cut(s)	990, 1277, 1376
CviAII	CATG	4 cut(s)	299, 898, 987, 1758
CviQI	GTAC	3 cut(s)	990, 1277, 1376
DdeI	CTNAG	2 cut(s)	158, 445
DpnI	GATC	6 cut(s)	84, 130, 169, 573, 801, 1454
DpnII	GATC	6 cut(s)	82, 128, 167, 571, 799, 1452
DrdI	GACNNNNNNGTC	1 cut(s)	1395
DseDI	GACNNNNNNGTC	1 cut(s)	1395
EaeI	YGGCCR	2 cut(s)	238, 1014
EagI	CGGCCG	1 cut(s)	1014
Eam1104I	CTCTTC	2 cut(s)	216, 1355
EarI	CTCTTC	2 cut(s)	216, 1355
EclXI	CGGCCG	1 cut(s)	1014
Eco130I	CCWWGG	4 cut(s)	235, 298, 1238, 1709
Eco32I	GATATC	1 cut(s)	218
Eco47I	GGWCC	5 cut(s)	258, 745, 1381, 1397, 1510
Eco47III	AGCGCT	1 cut(s)	841
Eco52I	CGGCCG	1 cut(s)	1014
Eco57I	CTGAAG	2 cut(s)	663, 1119
Eco72I	CACGTG	1 cut(s)	1292
Eco88I	CYCGRG	1 cut(s)	766
EcoO109I	RGGNCCY	1 cut(s)	745
EcoRI	GAATTC	2 cut(s)	672, 1566
EcoRII	CCWGG	6 cut(s)	1046, 1305, 1399, 1512, 1545, 1798
EcoRV	GATATC	1 cut(s)	218
EcoT14I	CCWWGG	4 cut(s)	235, 298, 1238, 1709
ErhI	CCWWGG	4 cut(s)	235, 298, 1238, 1709
Esp3I	CGTCTC	1 cut(s)	350
FaeI	CATG	4 cut(s)	302, 901, 990, 1761
FalI	AAGNNNNNCTT	6 cut(s)	100, 132, 601, 633, 661, 693
FaqI	GGGAC	4 cut(s)	271, 393, 731, 1496
FatI	CATG	4 cut(s)	298, 897, 986, 1757
FauI	CCCGC	1 cut(s)	1083
FbaI	TGATCA	1 cut(s)	799
FblI	GTMKAC	1 cut(s)	965
Fnu4HI	GCNGC	6 cut(s)	475, 780, 1017, 1343, 1413, 1821
FokI	GGATG	3 cut(s)	697, 1073, 1421
Fsp4HI	GCNGC	6 cut(s)	475, 780, 1017, 1343, 1413, 1821
FspBI	CTAG	3 cut(s)	1020, 1239, 1710
GlaI	GCGC	4 cut(s)	778, 841, 928, 1756
GluI	GCNGC	6 cut(s)	475, 780, 1017, 1343, 1413, 1821
GsaI	CCCAGC	1 cut(s)	1419
GsuI	CTGGAG	2 cut(s)	889, 1608
HaeII	RGCGCY	2 cut(s)	843, 930
HaeIII	GGCC	9 cut(s)	240, 362, 945, 1010, 1016, 1051, 1074, 1168, 1639
HgaI	GACGC	2 cut(s)	1348, 1447
HhaI	GCGC	4 cut(s)	779, 842, 929, 1757
Hin1I	GRCGYC	1 cut(s)	1028
Hin1II	CATG	4 cut(s)	302, 901, 990, 1761
Hin6I	GCGC	4 cut(s)	777, 840, 927, 1755
HinP1I	GCGC	4 cut(s)	777, 840, 927, 1755
HincII	GTYRAC	3 cut(s)	966, 1185, 1656
HindII	GTYRAC	3 cut(s)	966, 1185, 1656
HphI	GGTGA	7 cut(s)	427, 464, 578, 809, 944, 1145, 1616
Hpy166II	GTNNAC	5 cut(s)	966, 1136, 1185, 1607, 1656
Hpy188I	TCNGA	6 cut(s)	145, 408, 1099, 1330, 1388, 1840
Hpy188III	TCNNGA	9 cut(s)	507, 569, 666, 868, 1348, 1357, 1406, 1481, 1525
Hpy8I	GTNNAC	5 cut(s)	966, 1136, 1185, 1607, 1656
Hpy99I	CGWCG	5 cut(s)	1009, 1030, 1033, 1392, 1463
HpyAV	CCTTC	5 cut(s)	370, 443, 687, 716, 1440
HpyCH4III	ACNGT	2 cut(s)	326, 760
HpyCH4IV	ACGT	3 cut(s)	494, 1028, 1291
HpyF10VI	GCNNNNNNNGC	8 cut(s)	163, 1007, 1016, 1022, 1080, 1089, 1342, 1820
HpyF3I	CTNAG	2 cut(s)	158, 445
HpySE526I	ACGT	3 cut(s)	494, 1028, 1291
Hsp92I	GRCGYC	1 cut(s)	1028
Hsp92II	CATG	4 cut(s)	302, 901, 990, 1761
HspAI	GCGC	4 cut(s)	777, 840, 927, 1755
KflI	GGGWCCC	1 cut(s)	745
Kpn2I	TCCGGA	2 cut(s)	665, 1347
KroI	GCCGGC	1 cut(s)	997
KroNI	GCCGGC	1 cut(s)	999
Ksp22I	TGATCA	1 cut(s)	799
Kzo9I	GATC	6 cut(s)	82, 128, 167, 571, 799, 1452
LmnI	GCTCC	4 cut(s)	914, 1300, 1350, 1516
Lsp1109I	GCAGC	5 cut(s)	486, 791, 1329, 1424, 1832
LweI	GCATC	2 cut(s)	1051, 1399
MaeI	CTAG	3 cut(s)	1020, 1239, 1710
MaeII	ACGT	3 cut(s)	494, 1028, 1291
MalI	GATC	6 cut(s)	84, 130, 169, 573, 801, 1454
MboI	GATC	6 cut(s)	82, 128, 167, 571, 799, 1452
MboII	GAAGA	9 cut(s)	203, 212, 609, 681, 947, 1124, 1372, 1418, 1594
MfeI	CAATTG	3 cut(s)	132, 554, 1629
MhlI	GDGCHC	6 cut(s)	209, 494, 894, 1138, 1297, 1609
MlsI	TGGCCA	1 cut(s)	240
MluNI	TGGCCA	1 cut(s)	240
MlyI	GAGTC	3 cut(s)	397, 1265, 1432
MmeI	TCCRAC	3 cut(s)	195, 1325, 1411
Mox20I	TGGCCA	1 cut(s)	240
MroI	TCCGGA	2 cut(s)	665, 1347
MroNI	GCCGGC	1 cut(s)	997
MroXI	GAANNNNTTC	1 cut(s)	676
MscI	TGGCCA	1 cut(s)	240
MseI	TTAA	4 cut(s)	45, 179, 623, 1746
MslI	CAYNNNNRTG	3 cut(s)	736, 807, 887
Msp20I	TGGCCA	1 cut(s)	240
MspA1I	CMGCKG	2 cut(s)	782, 1415
MunI	CAATTG	3 cut(s)	132, 554, 1629
MvaI	CCWGG	6 cut(s)	1048, 1307, 1401, 1514, 1547, 1800
MwoI	GCNNNNNNNGC	8 cut(s)	163, 1007, 1016, 1022, 1080, 1089, 1342, 1820
NaeI	GCCGGC	1 cut(s)	999
NciI	CCSGG	7 cut(s)	595, 767, 768, 1058, 1071, 1080, 1450
NcoI	CCATGG	1 cut(s)	298
NdeII	GATC	6 cut(s)	82, 128, 167, 571, 799, 1452
NgoMIV	GCCGGC	1 cut(s)	997
NlaIII	CATG	4 cut(s)	302, 901, 990, 1761
NlaIV	GGNNCC	7 cut(s)	259, 746, 747, 1002, 1372, 1552, 1723
NmeAIII	GCCGAG	2 cut(s)	828, 992
NspI	RCATGY	1 cut(s)	1761
OliI	CACNNNNGTG	1 cut(s)	887
PaeI	GCATGC	1 cut(s)	1761
PcsI	WCGNNNNNNNCGW	1 cut(s)	1001
PdiI	GCCGGC	1 cut(s)	999
PdmI	GAANNNNTTC	1 cut(s)	676
PfeI	GAWTC	8 cut(s)	15, 70, 601, 707, 1146, 1353, 1617, 1841
PflFI	GACNNNGTC	1 cut(s)	1395
PflMI	CCANNNNNTGG	1 cut(s)	1799
PkrI	GCNGC	6 cut(s)	476, 781, 1018, 1344, 1414, 1822
PleI	GAGTC	3 cut(s)	397, 1265, 1431
PmaCI	CACGTG	1 cut(s)	1292
PmlI	CACGTG	1 cut(s)	1292
PpsI	GAGTC	3 cut(s)	397, 1265, 1431
Ppu21I	YACGTR	1 cut(s)	1292
PpuMI	RGGWCCY	1 cut(s)	745
PshBI	ATTAAT	1 cut(s)	45
Psp5II	RGGWCCY	1 cut(s)	745
Psp6I	CCWGG	6 cut(s)	1046, 1305, 1399, 1512, 1545, 1798
PspCI	CACGTG	1 cut(s)	1292
PspFI	CCCAGC	1 cut(s)	1415
PspGI	CCWGG	6 cut(s)	1046, 1305, 1399, 1512, 1545, 1798
PspN4I	GGNNCC	7 cut(s)	259, 746, 747, 1002, 1372, 1552, 1723
PspPI	GGNCC	8 cut(s)	258, 745, 944, 1050, 1073, 1381, 1397, 1510
PspPPI	RGGWCCY	1 cut(s)	745
PstI	CTGCAG	1 cut(s)	1781
PstNI	CAGNNNCTG	1 cut(s)	1342
PsyI	GACNNNGTC	1 cut(s)	1395
PvuII	CAGCTG	2 cut(s)	782, 1415
RsaI	GTAC	3 cut(s)	991, 1278, 1377
RsaNI	GTAC	3 cut(s)	990, 1277, 1376
RseI	CAYNNNNRTG	3 cut(s)	736, 807, 887
SalI	GTCGAC	1 cut(s)	964
SaqAI	TTAA	4 cut(s)	45, 179, 623, 1746
SatI	GCNGC	6 cut(s)	475, 780, 1017, 1343, 1413, 1821
Sau3AI	GATC	6 cut(s)	82, 128, 167, 571, 799, 1452
Sau96I	GGNCC	8 cut(s)	258, 745, 944, 1050, 1073, 1381, 1397, 1510
SchI	GAGTC	3 cut(s)	397, 1265, 1432
SduI	GDGCHC	6 cut(s)	209, 494, 894, 1138, 1297, 1609
SfaNI	GCATC	2 cut(s)	1051, 1399
SfcI	CTRYAG	1 cut(s)	1777
SinI	GGWCC	5 cut(s)	258, 745, 1381, 1397, 1510
SmaI	CCCGGG	1 cut(s)	768
SmiMI	CAYNNNNRTG	3 cut(s)	736, 807, 887
SphI	GCATGC	1 cut(s)	1761
SsiI	CCGC	6 cut(s)	183, 1017, 1076, 1280, 1286, 1368
SspMI	CTAG	3 cut(s)	1020, 1239, 1710
StyI	CCWWGG	4 cut(s)	235, 298, 1238, 1709
TaaI	ACNGT	2 cut(s)	326, 760
TaiI	ACGT	3 cut(s)	497, 1031, 1294
TaqI	TCGA	4 cut(s)	199, 214, 390, 965
TauI	GCSGC	1 cut(s)	1019
TfiI	GAWTC	8 cut(s)	15, 70, 601, 707, 1146, 1353, 1617, 1841
Tru1I	TTAA	4 cut(s)	45, 179, 623, 1746
Tru9I	TTAA	4 cut(s)	45, 179, 623, 1746
TscAI	CASTG	4 cut(s)	705, 909, 1179, 1650
TseI	GCWGC	5 cut(s)	474, 779, 1342, 1412, 1820
TspDTI	ATGAA	7 cut(s)	21, 212, 609, 699, 844, 1125, 1595
TspGWI	ACGGA	1 cut(s)	1560
TspMI	CCCGGG	1 cut(s)	766
TspRI	CASTG	4 cut(s)	705, 909, 1179, 1650
Tth111I	GACNNNGTC	1 cut(s)	1395
Van91I	CCANNNNNTGG	1 cut(s)	1799
VneI	GTGCAC	2 cut(s)	1134, 1605
VpaK11BI	GGWCC	5 cut(s)	258, 745, 1381, 1397, 1510
VspI	ATTAAT	1 cut(s)	45
XapI	RAATTY	3 cut(s)	409, 672, 1566
XceI	RCATGY	1 cut(s)	1761
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1796
XmaI	CCCGGG	1 cut(s)	766
XmaJI	CCTAGG	2 cut(s)	1238, 1709
XmiI	GTMKAC	1 cut(s)	965
XmnI	GAANNNNTTC	1 cut(s)	676
XspI	CTAG	3 cut(s)	1020, 1239, 1710
ZraI	GACGTC	1 cut(s)	1029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.