Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000820

Physical Location & Seq

Genomic Coordinates Reverse (-)

16881088 .. 16908196

Gene Structure 27109 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ30275

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGCCGAACCCGGCCCGCCCGGCTTCAAACGCACCTCTGAAGCACTCTACCATCAGGCTCTTTTGGGTGCCCATAATCCGATTGGGCAAATGGAAGCTTGGTTCGACGAATCCTTTAGCAAAGCGACCTAGGTTCGAGAATATTGCCTATTTATCCACAGTGGCCAGGAGCCAGGAGAGAAAGATTGTGCCCACTATATGCAAACAAGAACCTGTAAATTTGGTGAGGGGCTGCAAGTTTGACCATCCTATTTGGGTTCCTGATGGTGGAATCCCAGATTGGAAAGAGGTTCCACTTGTTGCTCCAAGTGAGTCCCTTCCTGAGAGACCTGGAGCGCCAGATTGTCCATACTTTCTAAAAACTCAAAGATGCAAGTTTGGTCTTAGATGCAAGTTTAATCATCCAAAGGACAAACTGGCTACTGCGTGTGCTTCAGAAAATGGTGATGTTTATGCCTTACCCGAGACTCCGAGAGGCCTTCTGAACCTGCATTTCTACTTGAAAACTGGGCAATGCAAGTATGGTGCAACCTGCAAATTTAATCACCCAAAAGACATGATACCATCAGCCACTCAAGAGAATAAATCTGGCGAAACTGAGACAGATCTTAAGACGGAGGGCAGTGAAGTTGCTGTGAAGCCTCTTGTTGGAGTTGGAATCACCGCAAATACTCAAATCACGCTGGAGTTGTCCAAGCATGACGCTCCATTGATTTGGCGGAGCGCAATAGTAGAAGGGTTGCCAGCGAGTTGGGCGGAGGAGAGACTGGCGCGCGGCAGTGCAGCGAGTTGGGCAGAGGAGAGCCTAGCGGTGTTGACTGGCGGAGAGGAGAGCAGCGAAGAAGCAGGGTGTCCAGAGGGTGAAGCTGATTGTCCATTCTACCTGAAAACTGGAAGCTGCAAGTATGGGGCCACTTGCCAGTACAATCACCCTGATAGATATGATATCAATCCACCTGTTGCTGCAATCAGCTATCCTCTTTCAGCGCCTTCAGTTGCAGGTTTTAACATGGGAGTTGCTAATCCAGCTGCCTTCACTAATCAAACTTTGGCACAACCAACGTTGGGAGCGAGTCCTACTGTTTATCCTCAGAGGTTTGGACAGGCTGAGTGTGAATACTATATGAAGACTGGGGAATGTAAGTATGGTGCGCAATGCAGATTCCATCACCCGATTGATAGGCCAGCAGTGGCGTTGTCAACAACAAAGCCATCTCAACAAGAAAATGTGAAGCTAACGCTGGCTGGACTACCTAGGAGAGAGGGTGCCGTTATCCGTGTGTATTACCTTAAAACCGGCACATGCAAGTATGGTGCAACCTGCAGATTTGACCACCCACCTCCTGGCGAAGTTGTAGCAATGGCAGCTTCACAAGCAAAATCTGATTCTATTGGAGGAAAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001709 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006417 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032502 GO:0034248 GO:0034249 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0044424 GO:0044444 GO:0044464 GO:0045165 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048869 GO:0050779 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:1901363 GO:1903311 GO:1903313 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

468

Amino Acids

50.94

Weight (kDa)

8.63

Isoelectric Point (pI)

39.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH	PF00642	111 - 136	2.4e-08	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	164 - 184	1.3e-07	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	287 - 311	7.1e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	366 - 391	9.7e-11	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	428 - 447	1.2e-07	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf_CCCH_4	PF18345	428 - 445	7.2e-06	Zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12680
fragaria_vesca	FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640 FvH4_3g13640
malus_domestica	MD03G1280400.v1.1 MD06G1158700.v1.1 MD06G1158900.v1.1 MD06G1159100.v1.1 MD10G1219700.v1.1
prunus_persica	Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.4G124000_v2.0.a1 Prupe.7G013500_v2.0.a1 Prupe.8G067100_v2.0.a1
pyrus_communis	pycom06g14160 pycom06g14170 pycom10g18590
rosa_chinensis	RchiOBHm_Chr5g0022551 RchiOBHm_Chr5g0022581 RchiOBHm_Chr5g0022611 RchiOBHm_Chr5g0022711 RchiOBHm_Chr5g0022731 RchiOBHm_Chr5g0022751 RchiOBHm_Chr5g0022761 RchiOBHm_Chr5g0022841 RchiOBHm_Chr5g0022861 RchiOBHm_Chr5g0022911
rosa_laevigata	RLG00000032672 RLG00000032674 RLG00000032675 RLG00000032677 RLG00000032679 RLG00000035293
rosa_multiflora	Rmu_sc0000401.1_g000006 Rmu_sc0000401.1_g000007 Rmu_sc0000401.1_g000014 Rmu_sc0000401.1_g000026 Rmu_sc0000401.1_g000028 Rmu_sc0010181.1_g000001 Rmu_sc0010181.1_g000004 Rmu_sc0010181.1_g000009 Rmu_sc0042157.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056450 Rroxscaffold_1G00056490
rosa_rugosa	Rorug05G0075100
rosa_samantha	Rh5AG161600 Rh5BG099400 Rh5BG160400 Rh5BG160700 Rh5CG175100 Rh5DG161100 Rh5DG161300 Rh5DG161500 Rh5DG161600 Rh5DG161700 Rh5DG161900 Rh5DG162000 Rh5DG162400
rosa_wichuraiana	Rw5G014410 Rw5G014450 Rw5G014490 Rw5G014510 Rw5G014540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1152
Acc36I	ACCTGC	4 cut(s)	495, 539, 989, 1328
AccB1I	GGYRCC	2 cut(s)	67, 1265
AccB7I	CCANNNNNTGG	1 cut(s)	1343
AccII	CGCG	2 cut(s)	772, 774
AciI	CCGC	7 cut(s)	16, 663, 718, 755, 774, 809, 822
AclI	AACGTT	1 cut(s)	1061
AcoI	YGGCCR	1 cut(s)	162
AcsI	RAATTY	2 cut(s)	217, 536
AcuI	CTGAAG	3 cut(s)	59, 417, 975
AfaI	GTAC	1 cut(s)	923
AfiI	CCNNNNNNNGG	4 cut(s)	266, 647, 1064, 1343
AflII	CTTAAG	1 cut(s)	608
AgsI	TTSAA	2 cut(s)	27, 502
AjnI	CCWGG	4 cut(s)	164, 171, 328, 1342
AjuI	GAANNNNNNNTTGG	2 cut(s)	262, 294
AloI	GAACNNNNNNTCC	2 cut(s)	85, 117
AluBI	AGCT	7 cut(s)	97, 866, 897, 972, 1028, 1234, 1367
AluI	AGCT	7 cut(s)	97, 866, 897, 972, 1028, 1234, 1367
Alw26I	GTCTC	4 cut(s)	319, 458, 593, 757
Ama87I	CYCGRG	1 cut(s)	461
AoxI	GGCC	5 cut(s)	12, 162, 475, 909, 1181
ApeKI	GCWGC	7 cut(s)	231, 782, 834, 897, 962, 1028, 1364
ApoI	RAATTY	2 cut(s)	217, 536
AspA2I	CCTAGG	2 cut(s)	128, 1253
AspLEI	GCGC	6 cut(s)	337, 725, 772, 774, 988, 1153
AspS9I	GGNCC	2 cut(s)	13, 909
AsuC2I	CCSGG	2 cut(s)	11, 20
AsuHPI	GGTGA	7 cut(s)	235, 455, 536, 652, 872, 920, 1160
AvaI	CYCGRG	1 cut(s)	461
AvrII	CCTAGG	2 cut(s)	128, 1253
BaeGI	GKGCMC	2 cut(s)	72, 192
BalI	TGGCCA	1 cut(s)	164
BanI	GGYRCC	2 cut(s)	67, 1265
BbsI	GAAGAC	1 cut(s)	1133
BbvI	GCAGC	7 cut(s)	218, 794, 846, 884, 949, 1015, 1376
BccI	CCATC	6 cut(s)	59, 252, 257, 571, 1173, 1219
BceAI	ACGGC	1 cut(s)	1253
BcgI	CGANNNNNNTGC	2 cut(s)	125, 159
BciT130I	CCWGG	4 cut(s)	166, 173, 330, 1344
BcnI	CCSGG	2 cut(s)	11, 20
BcoDI	GTCTC	4 cut(s)	319, 458, 593, 757
BfaI	CTAG	3 cut(s)	129, 806, 1254
BfmI	CTRYAG	1 cut(s)	1321
BfoI	RGCGCY	2 cut(s)	338, 989
BfrI	CTTAAG	1 cut(s)	608
BfuAI	ACCTGC	4 cut(s)	495, 539, 989, 1328
BglI	GCCNNNNNGGC	1 cut(s)	20
BglII	AGATCT	1 cut(s)	604
BisI	GCNGC	8 cut(s)	232, 775, 783, 835, 898, 963, 1029, 1365
BlnI	CCTAGG	2 cut(s)	128, 1253
BlsI	GCNGC	8 cut(s)	233, 776, 784, 836, 899, 964, 1030, 1366
Bme1390I	CCNGG	6 cut(s)	11, 20, 166, 173, 330, 1344
BmeT110I	CYCGRG	1 cut(s)	461
BmgT120I	GGNCC	2 cut(s)	13, 909
BmiI	GGNNCC	6 cut(s)	69, 170, 258, 291, 910, 1267
BmrFI	CCNGG	6 cut(s)	11, 20, 166, 173, 330, 1344
BmrI	ACTGGG	2 cut(s)	516, 1140
BmsI	GCATC	2 cut(s)	359, 377
BmuI	ACTGGG	2 cut(s)	516, 1140
BpiI	GAAGAC	1 cut(s)	1133
BpmI	CTGGAG	2 cut(s)	351, 704
BpuEI	CTTGAG	1 cut(s)	558
BpuMI	CCSGG	2 cut(s)	11, 20
BsaBI	GATNNNNATC	1 cut(s)	948
BsaI	GGTCTC	1 cut(s)	319
BsaJI	CCNNGG	2 cut(s)	128, 1253
BsaXI	ACNNNNNCTCC	2 cut(s)	1249, 1279
Bsc4I	CCNNNNNNNGG	4 cut(s)	266, 647, 1064, 1343
Bse118I	RCCGGY	1 cut(s)	1295
Bse1I	ACTGG	7 cut(s)	420, 511, 771, 823, 895, 919, 1135
Bse3DI	GCAATG	3 cut(s)	518, 1160, 1365
Bse8I	GATNNNNATC	1 cut(s)	948
BseBI	CCWGG	4 cut(s)	166, 173, 330, 1344
BseDI	CCNNGG	2 cut(s)	128, 1253
BseGI	GGATG	2 cut(s)	244, 400
BseJI	GATNNNNATC	1 cut(s)	948
BseLI	CCNNNNNNNGG	4 cut(s)	266, 647, 1064, 1343
BseMI	GCAATG	3 cut(s)	518, 1160, 1365
BseMII	CTCAG	4 cut(s)	312, 588, 1098, 1103
BseNI	ACTGG	7 cut(s)	420, 511, 771, 823, 895, 919, 1135
BsePI	GCGCGC	1 cut(s)	770
BseRI	GAGGAG	3 cut(s)	773, 812, 842
BseSI	GKGCMC	2 cut(s)	72, 192
BseXI	GCAGC	7 cut(s)	218, 794, 846, 884, 949, 1015, 1376
BsgI	GTGCAG	1 cut(s)	801
Bsh1236I	CGCG	2 cut(s)	772, 774
BshFI	GGCC	5 cut(s)	14, 164, 477, 911, 1183
BshNI	GGYRCC	2 cut(s)	67, 1265
BsiHKCI	CYCGRG	1 cut(s)	461
BsiSI	CCGG	3 cut(s)	11, 20, 1296
BslFI	GGGAC	1 cut(s)	298
BslI	CCNNNNNNNGG	4 cut(s)	266, 647, 1064, 1343
BsmAI	GTCTC	4 cut(s)	319, 458, 593, 757
BsmFI	GGGAC	1 cut(s)	298
BsnI	GGCC	5 cut(s)	14, 164, 477, 911, 1183
Bso31I	GGTCTC	1 cut(s)	319
BsoBI	CYCGRG	1 cut(s)	461
Bsp1286I	GDGCHC	2 cut(s)	72, 192
Bsp143I	GATC	1 cut(s)	604
BspACI	CCGC	7 cut(s)	16, 663, 718, 755, 774, 809, 822
BspANI	GGCC	5 cut(s)	14, 164, 477, 911, 1183
BspCNI	CTCAG	4 cut(s)	313, 589, 1099, 1102
BspFNI	CGCG	2 cut(s)	772, 774
BspLI	GGNNCC	6 cut(s)	69, 170, 258, 291, 910, 1267
BspMAI	CTGCAG	1 cut(s)	1325
BspMI	ACCTGC	4 cut(s)	495, 539, 989, 1328
BspT107I	GGYRCC	2 cut(s)	67, 1265
BspTI	CTTAAG	1 cut(s)	608
BspTNI	GGTCTC	1 cut(s)	319
BsrDI	GCAATG	3 cut(s)	518, 1160, 1365
BsrFI	RCCGGY	1 cut(s)	1295
BsrI	ACTGG	7 cut(s)	420, 511, 771, 823, 895, 919, 1135
BssAI	RCCGGY	1 cut(s)	1295
BssECI	CCNNGG	2 cut(s)	128, 1253
BssHII	GCGCGC	1 cut(s)	770
BssMI	GATC	1 cut(s)	604
BssT1I	CCWWGG	2 cut(s)	128, 1253
Bst2UI	CCWGG	4 cut(s)	166, 173, 330, 1344
Bst4CI	ACNGT	2 cut(s)	160, 1081
BstAFI	CTTAAG	1 cut(s)	608
BstC8I	GCNNGC	5 cut(s)	16, 744, 772, 1185, 1242
BstDEI	CTNAG	5 cut(s)	321, 383, 597, 1089, 1107
BstF5I	GGATG	2 cut(s)	244, 400
BstFNI	CGCG	2 cut(s)	772, 774
BstH2I	RGCGCY	2 cut(s)	338, 989
BstHHI	GCGC	6 cut(s)	337, 725, 772, 774, 988, 1153
BstKTI	GATC	1 cut(s)	607
BstMAI	GTCTC	4 cut(s)	319, 458, 593, 757
BstMBI	GATC	1 cut(s)	604
BstMWI	GCNNNNNNNGC	7 cut(s)	20, 29, 752, 791, 1025, 1364, 1373
BstNI	CCWGG	4 cut(s)	166, 173, 330, 1344
BstNSI	RCATGY	1 cut(s)	1305
BstSCI	CCNGG	6 cut(s)	9, 18, 164, 171, 328, 1342
BstSFI	CTRYAG	1 cut(s)	1321
BstSLI	GKGCMC	2 cut(s)	72, 192
BstUI	CGCG	2 cut(s)	772, 774
BstV1I	GCAGC	7 cut(s)	218, 794, 846, 884, 949, 1015, 1376
BstV2I	GAAGAC	1 cut(s)	1133
BstX2I	RGATCY	1 cut(s)	604
BstXI	CCANNNNNNTGG	2 cut(s)	714, 750
BstYI	RGATCY	1 cut(s)	604
BsuRI	GGCC	5 cut(s)	14, 164, 477, 911, 1183
BtsCI	GGATG	2 cut(s)	244, 400
BtsI	GCAGTG	3 cut(s)	628, 784, 1194
BtsIMutI	CAGTG	4 cut(s)	165, 628, 784, 1194
BveI	ACCTGC	4 cut(s)	495, 539, 989, 1328
Cac8I	GCNNGC	5 cut(s)	16, 744, 772, 1185, 1242
CfoI	GCGC	6 cut(s)	337, 725, 772, 774, 988, 1153
Cfr10I	RCCGGY	1 cut(s)	1295
Cfr13I	GGNCC	2 cut(s)	13, 909
CseI	GACGC	1 cut(s)	710
Csp6I	GTAC	1 cut(s)	922
CviAII	CATG	4 cut(s)	556, 698, 1009, 1302
CviQI	GTAC	1 cut(s)	922
DdeI	CTNAG	5 cut(s)	321, 383, 597, 1089, 1107
DpnI	GATC	1 cut(s)	606
DpnII	GATC	1 cut(s)	604
EaeI	YGGCCR	1 cut(s)	162
EciI	GGCGGA	3 cut(s)	733, 770, 837
Eco130I	CCWWGG	2 cut(s)	128, 1253
Eco147I	AGGCCT	1 cut(s)	477
Eco31I	GGTCTC	1 cut(s)	319
Eco32I	GATATC	1 cut(s)	946
Eco57I	CTGAAG	3 cut(s)	59, 417, 975
Eco88I	CYCGRG	1 cut(s)	461
EcoRII	CCWGG	4 cut(s)	164, 171, 328, 1342
EcoRV	GATATC	1 cut(s)	946
EcoT14I	CCWWGG	2 cut(s)	128, 1253
ErhI	CCWWGG	2 cut(s)	128, 1253
FaeI	CATG	4 cut(s)	559, 701, 1012, 1305
FaqI	GGGAC	1 cut(s)	298
FatI	CATG	4 cut(s)	555, 697, 1008, 1301
FauI	CCCGC	1 cut(s)	23
Fnu4HI	GCNGC	8 cut(s)	232, 775, 783, 835, 898, 963, 1029, 1365
FokI	GGATG	2 cut(s)	231, 387
Fsp4HI	GCNGC	8 cut(s)	232, 775, 783, 835, 898, 963, 1029, 1365
FspBI	CTAG	3 cut(s)	129, 806, 1254
FspI	TGCGCA	1 cut(s)	1152
GlaI	GCGC	6 cut(s)	336, 724, 771, 773, 987, 1152
GluI	GCNGC	8 cut(s)	232, 775, 783, 835, 898, 963, 1029, 1365
GsuI	CTGGAG	2 cut(s)	351, 704
HaeII	RGCGCY	2 cut(s)	338, 989
HaeIII	GGCC	5 cut(s)	14, 164, 477, 911, 1183
HapII	CCGG	3 cut(s)	11, 20, 1296
HgaI	GACGC	1 cut(s)	710
HhaI	GCGC	6 cut(s)	337, 725, 772, 774, 988, 1153
Hin1II	CATG	4 cut(s)	559, 701, 1012, 1305
Hin6I	GCGC	6 cut(s)	335, 723, 770, 772, 986, 1151
HinP1I	GCGC	6 cut(s)	335, 723, 770, 772, 986, 1151
HincII	GTYRAC	2 cut(s)	816, 1200
HindII	GTYRAC	2 cut(s)	816, 1200
HindIII	AAGCTT	1 cut(s)	95
HinfI	GANTC	8 cut(s)	109, 270, 311, 466, 657, 1072, 1161, 1385
HpaII	CCGG	3 cut(s)	11, 20, 1296
HphI	GGTGA	7 cut(s)	235, 455, 536, 652, 872, 920, 1160
Hpy166II	GTNNAC	2 cut(s)	816, 1200
Hpy188I	TCNGA	7 cut(s)	39, 80, 436, 471, 483, 1092, 1384
Hpy188III	TCNNGA	5 cut(s)	136, 260, 320, 575, 854
Hpy8I	GTNNAC	2 cut(s)	816, 1200
Hpy99I	CGWCG	1 cut(s)	109
HpyAV	CCTTC	5 cut(s)	326, 488, 728, 999, 1042
HpyCH4III	ACNGT	2 cut(s)	160, 1081
HpyCH4IV	ACGT	1 cut(s)	1061
HpyF10VI	GCNNNNNNNGC	7 cut(s)	20, 29, 752, 791, 1025, 1364, 1373
HpyF3I	CTNAG	5 cut(s)	321, 383, 597, 1089, 1107
HpySE526I	ACGT	1 cut(s)	1061
Hsp92II	CATG	4 cut(s)	559, 701, 1012, 1305
HspAI	GCGC	6 cut(s)	335, 723, 770, 772, 986, 1151
Kzo9I	GATC	1 cut(s)	604
LmnI	GCTCC	6 cut(s)	168, 307, 332, 709, 720, 1067
Lsp1109I	GCAGC	7 cut(s)	218, 794, 846, 884, 949, 1015, 1376
LweI	GCATC	2 cut(s)	359, 377
MaeI	CTAG	3 cut(s)	129, 806, 1254
MaeII	ACGT	1 cut(s)	1061
MalI	GATC	1 cut(s)	606
MboI	GATC	1 cut(s)	604
MboII	GAAGA	2 cut(s)	851, 1138
MflI	RGATCY	1 cut(s)	604
MhlI	GDGCHC	2 cut(s)	72, 192
MlsI	TGGCCA	1 cut(s)	164
MluCI	AATT	2 cut(s)	217, 536
MluNI	TGGCCA	1 cut(s)	164
MlyI	GAGTC	3 cut(s)	320, 460, 1081
MmeI	TCCRAC	2 cut(s)	628, 634
Mox20I	TGGCCA	1 cut(s)	164
MscI	TGGCCA	1 cut(s)	164
MseI	TTAA	5 cut(s)	396, 540, 609, 1005, 1290
Msp20I	TGGCCA	1 cut(s)	164
MspA1I	CMGCKG	1 cut(s)	1028
MspCI	CTTAAG	1 cut(s)	608
MspI	CCGG	3 cut(s)	11, 20, 1296
MspR9I	CCNGG	6 cut(s)	11, 20, 166, 173, 330, 1344
MvaI	CCWGG	4 cut(s)	166, 173, 330, 1344
MvnI	CGCG	2 cut(s)	772, 774
MwoI	GCNNNNNNNGC	7 cut(s)	20, 29, 752, 791, 1025, 1364, 1373
NciI	CCSGG	2 cut(s)	11, 20
NdeII	GATC	1 cut(s)	604
NlaIII	CATG	4 cut(s)	559, 701, 1012, 1305
NlaIV	GGNNCC	6 cut(s)	69, 170, 258, 291, 910, 1267
NsbI	TGCGCA	1 cut(s)	1152
NspI	RCATGY	1 cut(s)	1305
PauI	GCGCGC	1 cut(s)	770
PceI	AGGCCT	1 cut(s)	477
PcsI	WCGNNNNNNNCGW	1 cut(s)	1067
PfeI	GAWTC	5 cut(s)	109, 270, 657, 1161, 1385
PflMI	CCANNNNNTGG	1 cut(s)	1343
PkrI	GCNGC	8 cut(s)	233, 776, 784, 836, 899, 964, 1030, 1366
PleI	GAGTC	3 cut(s)	319, 460, 1080
PpsI	GAGTC	3 cut(s)	319, 460, 1080
Psp1406I	AACGTT	1 cut(s)	1061
Psp6I	CCWGG	4 cut(s)	164, 171, 328, 1342
PspGI	CCWGG	4 cut(s)	164, 171, 328, 1342
PspN4I	GGNNCC	6 cut(s)	69, 170, 258, 291, 910, 1267
PspPI	GGNCC	2 cut(s)	13, 909
PstI	CTGCAG	1 cut(s)	1325
PsuI	RGATCY	1 cut(s)	604
PteI	GCGCGC	1 cut(s)	770
PvuII	CAGCTG	1 cut(s)	1028
RsaI	GTAC	1 cut(s)	923
RsaNI	GTAC	1 cut(s)	922
SaqAI	TTAA	5 cut(s)	396, 540, 609, 1005, 1290
SatI	GCNGC	8 cut(s)	232, 775, 783, 835, 898, 963, 1029, 1365
Sau3AI	GATC	1 cut(s)	604
Sau96I	GGNCC	2 cut(s)	13, 909
SchI	GAGTC	3 cut(s)	320, 460, 1081
ScrFI	CCNGG	6 cut(s)	11, 20, 166, 173, 330, 1344
SduI	GDGCHC	2 cut(s)	72, 192
SfaNI	GCATC	2 cut(s)	359, 377
SfcI	CTRYAG	1 cut(s)	1321
SmlI	CTYRAG	2 cut(s)	573, 608
SmoI	CTYRAG	2 cut(s)	573, 608
Sse9I	AATT	2 cut(s)	217, 536
SseBI	AGGCCT	1 cut(s)	477
SsiI	CCGC	7 cut(s)	16, 663, 718, 755, 774, 809, 822
SspI	AATATT	1 cut(s)	142
SspMI	CTAG	3 cut(s)	129, 806, 1254
StuI	AGGCCT	1 cut(s)	477
StyD4I	CCNGG	6 cut(s)	9, 18, 164, 171, 328, 1342
StyI	CCWWGG	2 cut(s)	128, 1253
TaaI	ACNGT	2 cut(s)	160, 1081
TaiI	ACGT	1 cut(s)	1064
TaqI	TCGA	2 cut(s)	104, 135
TasI	AATT	2 cut(s)	217, 536
TatI	WGTACW	1 cut(s)	921
TauI	GCSGC	1 cut(s)	777
TfiI	GAWTC	5 cut(s)	109, 270, 657, 1161, 1385
Tru1I	TTAA	5 cut(s)	396, 540, 609, 1005, 1290
Tru9I	TTAA	5 cut(s)	396, 540, 609, 1005, 1290
TscAI	CASTG	4 cut(s)	165, 628, 784, 1194
TseI	GCWGC	7 cut(s)	231, 782, 834, 897, 962, 1028, 1364
TspDTI	ATGAA	1 cut(s)	1139
TspGWI	ACGGA	2 cut(s)	629, 1265
TspRI	CASTG	4 cut(s)	165, 628, 784, 1194
Van91I	CCANNNNNTGG	1 cut(s)	1343
Vha464I	CTTAAG	1 cut(s)	608
XapI	RAATTY	2 cut(s)	217, 536
XceI	RCATGY	1 cut(s)	1305
XcmI	CCANNNNNNNNNTGG	2 cut(s)	79, 1340
XmaJI	CCTAGG	2 cut(s)	128, 1253
XspI	CTAG	3 cut(s)	129, 806, 1254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.