AT4G00980

Zinc knuckle (CCHC-type) family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000258
Physical Location & Seq
Reverse (-)
422478 .. 424588
2111 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G00980.1

Sequence Viewer

Length: 1467 bp
ATGGAGAATTCGTTGCTTGATTCTGGTGAAACTATGGAGATTGTCGCTACACAAAAAATCGAGGAAACAGTGAAGAGCATACTCAGTGAATCTGATATGGACCAAATGACGGAGTTCAAACTCCGACTTGACGCTTCGGCTAAACTCGGTATCGACTTATCGGGAACCAATCACAAGAAGCTAGTCAGAGATGTTCTTGAGGTCTTTTTGCTATCGACTCCCGGTGAAGCACTCGTACCGGAGACGGTGGCTCCGGCGAAAAATGAGACAGTTTCTGTTGCTGCCGCTTCCGTTGGTGGTGAAGATGAGCGCTTTATTTGTAAGTTATCGGAGAAGCAAAATGCGACGGTTCAAAGATACAGAGGCCAACCTTTTCTATCGATTGGTTCTCAGGAACATGGAAAGGCTTTTAGAGGAGCACATTTGTCAACTAACCAATGGTCTGTAATCAAGAAGAATTTTGCAGCGATAGAGGACGGTATTAAGCAGTGCCAATCAAAACTAAAATCTGAAGCAGCACGAAATGGAGATACTTCTGAGGCTGTGGATAAGGACAGCTCTCACGGTTTTTCTGTTATCAAGATTTCACGATTTGATGGAAAGAGTTATCTTTACTGGGCTTCACAGATGGAACTCTTTCTGAAGCAATTGAAGCTGACTTATGTACTCTCTGAACCTTGTCCCAGTATTGGTAGCTCTCAAGGCCCTGAAACCAACCCCAGGGAAATAACTCGAGCTGATGCTACGGGGAAAAAATGGTTGAGAGATGATTACCTGTGCTATACTCACTTGATGAACTCCTTGTCAGATCATCTATACCGTCGATACTCTCAGAAATTTAAGCATGCCAAAGAATTGTGGGACGAGTTAAAATGGGTCTACCAGTGTGATGAATCCAAATCGAAGAGGTCACAAGTCAGAAAGTACATTGAATTCAGAATGGTGGAAGAGAGACCGATACTCGAGCAAGTCCAAGTCTTTAACAAGATTGCGGATTCCATAGTGAGTGCTGGTATGTTTCTTGATGAGGCATTTCATGTGAGTACCATCATCTCCAAGTTTCCCCCGTCTTGGAGAGGCTTCTGCACCAGGTTAATGGAAGAGGAGTATTTACCAGTCTGGATGTTGATGGAACGAGTAAAAGCTGAGGAAGAGCTTCTCAGAAATGGAGCAAAAGGGGTTACATATAGACCAGCCACAGGCTCCTCTCAGATGGAAAGGACACCGAGTCTAGGAACAACACATAGAGGATCTCAGAGCGTAGGTTGGAAGAGGAAAGAACCTGAGAGAGACGAGAGAGTCATCATCGTCTGTGACAACTGTGGGAGGAAAGGACATCTCGCAAAGCATTGCTGGGGTAGTAAATCTGATGAGAGAGCTTCCGGAAAATCAAACCGGATCAACTCCTCAGTCGCTGCACCTGTGGAATCAGAGACTCAAGCAACAACAAACAATGATAGGGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DEK_C PC4 Retrotran_gag_2

Protein Analysis

488

Amino Acids

55.06

Weight (kDa)

7.96

Isoelectric Point (pI)

34.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEK_C PF08766 18 - 70 2e-10 DEK C terminal domain
Retrotran_gag_2 PF14223 237 - 386 4.6e-20 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000258)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00980
fragaria_vesca FvH4_1g25682 FvH4_2g13961 FvH4_2g20162 FvH4_2g24753 FvH4_3g12191 FvH4_3g12632 FvH4_3g16171 FvH4_4g05871 FvH4_4g05873 FvH4_4g10121 FvH4_4g15488 FvH4_4g23911 FvH4_4g27782 FvH4_5g08912 FvH4_5g23001 FvH4_5g24552 FvH4_5g32801 FvH4_5g32802 FvH4_6g05093 FvH4_6g19722 FvH4_6g20391 FvH4_6g33792 FvH4_7g01381 FvH4_7g16761 FvH4_7g16761 FvH4_7g16761
malus_domestica MD01G1082500.v1.1 MD15G1436400.v1.1
prunus_persica Prupe.2G021400_v2.0.a1 Prupe.2G052400_v2.0.a1 Prupe.2G065000_v2.0.a1 Prupe.2G187700_v2.0.a1 Prupe.2G187800_v2.0.a1 Prupe.2G189900_v2.0.a1 Prupe.2G191300_v2.0.a1 Prupe.2G191700_v2.0.a1 Prupe.4G265600_v2.0.a1 Prupe.7G014200_v2.0.a1 Prupe.7G039000_v2.0.a1
pyrus_communis pycom01g05590 pycom01g05910 pycom02g12230 pycom02g25840 pycom03g15580 pycom04g04480 pycom05g09230 pycom05g23350 pycom05g23360 pycom07g08380 pycom09g01980 pycom09g01990 pycom11g18190 pycom11g18200 pycom11g21580 pycom13g04160 pycom15g25800 pycom16g16210 pycom16g17230 pycom16g24560 pycom16g25700 pycom17g11020
rosa_chinensis RchiOBHm_Chr1g0359981 RchiOBHm_Chr2g0151961 RchiOBHm_Chr2g0171331 RchiOBHm_Chr5g0081471 RchiOBHm_Chr6g0283031 RchiOBHm_Chr7g0197111 RchiOBHm_Chr7g0222601
rosa_laevigata RLG00000027843 RLG00000027845 RLG00000030065
rosa_multiflora Rmu_sc0000381.1_g000031 Rmu_sc0001179.1_g000035 Rmu_sc0001616.1_g000046 Rmu_sc0001851.1_g000032 Rmu_sc0002152.1_g000013 Rmu_sc0004031.1_g000015 Rmu_sc0004645.1_g000003 Rmu_sc0007393.1_g000001 Rmu_sc0008949.1_g000003 Rmu_sc0009799.1_g000011 Rmu_sc0011614.1_g000001 Rmu_sc0011699.1_g000009 Rmu_sc0019280.1_g000001 Rmu_sc0023984.1_g000001 Rmu_ssc0000050.1_g000036
rosa_roxburghii Rroxscaffold_1G00022650 Rroxscaffold_1G00033480 Rroxscaffold_3G00270250 Rroxscaffold_4G00296600 Rroxscaffold_4G00296760 Rroxscaffold_6G00409840
rosa_rugosa Rorug01G0273800 Rorug01G0273900 Rorug01G0274000
rosa_samantha Rh1AG287300 Rh1AG288100 Rh1BG253000 Rh1BG253500 Rh1BG399800 Rh1CG270400 Rh1CG271000 Rh1DG282000 Rh1DG282500 Rh4DG126500 Rh5DG194600 Rh5DG461100
rosa_wichuraiana Rw0G009130 Rw1G002590 Rw1G008490 Rw1G012210 Rw1G014290 Rw1G014490 Rw1G025510 Rw2G025840 Rw2G026170 Rw2G036510 Rw3G003050 Rw4G009270 Rw5G002350 Rw5G013930 Rw5G019500 Rw5G025890 Rw5G029960 Rw5G032360 Rw6G009890 Rw6G015670 Rw6G015860 Rw7G010030 Rw7G032600 Rw7G032770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1298
AccI GTMKAC 1 cut(s) 879
AccIII TCCGGA 1 cut(s) 1382
AciI CCGC 2 cut(s) 285, 992
AclWI GGATC 2 cut(s) 1258, 1406
AcsI RAATTY 4 cut(s) 7, 457, 836, 932
AcuI CTGAAG 2 cut(s) 531, 662
AfaI GTAC 4 cut(s) 237, 666, 926, 1045
AfeI AGCGCT 1 cut(s) 311
AfiI CCNNNNNNNGG 6 cut(s) 109, 689, 720, 1071, 1199, 1232
AgsI TTSAA 4 cut(s) 118, 353, 652, 932
AhdI GACNNNNNGTC 1 cut(s) 1227
AjnI CCWGG 2 cut(s) 719, 1088
AluBI AGCT 8 cut(s) 181, 558, 655, 696, 737, 1145, 1156, 1379
AluI AGCT 8 cut(s) 181, 558, 655, 696, 737, 1145, 1156, 1379
Alw21I GWGCWC 1 cut(s) 421
Alw26I GTCTC 5 cut(s) 236, 260, 946, 1284, 1427
AlwI GGATC 2 cut(s) 1258, 1406
AlwNI CAGNNNCTG 2 cut(s) 275, 1415
Ama87I CYCGRG 2 cut(s) 732, 962
Aor13HI TCCGGA 1 cut(s) 1382
Aor51HI AGCGCT 1 cut(s) 311
AoxI GGCC 2 cut(s) 364, 703
ApeKI GCWGC 4 cut(s) 281, 464, 515, 1415
ApoI RAATTY 4 cut(s) 7, 457, 836, 932
Asp700I GAANNNNTTC 2 cut(s) 636, 1155
AspLEI GCGC 1 cut(s) 312
AspS9I GGNCC 2 cut(s) 100, 704
AsuC2I CCSGG 1 cut(s) 222
AsuHPI GGTGA 3 cut(s) 38, 236, 311
AvaI CYCGRG 2 cut(s) 732, 962
AvaII GGWCC 1 cut(s) 100
BarI GAAGNNNNNNTAC 2 cut(s) 219, 251
Bbv12I GWGCWC 1 cut(s) 421
BbvCI CCTCAGC 1 cut(s) 1146
BbvI GCAGC 4 cut(s) 268, 476, 527, 1402
BccI CCATC 5 cut(s) 590, 622, 1055, 1123, 1207
BciT130I CCWGG 2 cut(s) 721, 1090
BcnI CCSGG 1 cut(s) 222
BcoDI GTCTC 5 cut(s) 236, 260, 946, 1284, 1427
BfaI CTAG 2 cut(s) 182, 1232
BfoI RGCGCY 1 cut(s) 313
BisI GCNGC 5 cut(s) 282, 285, 465, 516, 1416
BlsI GCNGC 5 cut(s) 283, 286, 466, 517, 1417
Bme1390I CCNGG 3 cut(s) 222, 721, 1090
Bme18I GGWCC 1 cut(s) 100
BmeRI GACNNNNNGTC 1 cut(s) 1227
BmeT110I CYCGRG 2 cut(s) 732, 962
BmgT120I GGNCC 2 cut(s) 100, 704
BmiI GGNNCC 3 cut(s) 166, 252, 1204
BmrFI CCNGG 3 cut(s) 222, 721, 1090
BmrI ACTGGG 2 cut(s) 625, 678
BmsI GCATC 1 cut(s) 730
BmuI ACTGGG 2 cut(s) 625, 678
Bpu10I CCTNAGC 1 cut(s) 1146
BpuEI CTTGAG 3 cut(s) 218, 684, 1422
BpuMI CCSGG 1 cut(s) 222
Bsa29I ATCGAT 1 cut(s) 380
BsaI GGTCTC 1 cut(s) 946
BsaJI CCNNGG 2 cut(s) 719, 720
BsaWI WCCGGW 3 cut(s) 238, 1382, 1395
BsaXI ACNNNNNCTCC 3 cut(s) 26, 235, 265
Bsc4I CCNNNNNNNGG 6 cut(s) 109, 689, 720, 1071, 1199, 1232
Bse1I ACTGG 4 cut(s) 620, 684, 883, 1115
Bse3DI GCAATG 1 cut(s) 1348
BseAI TCCGGA 1 cut(s) 1382
BseBI CCWGG 2 cut(s) 721, 1090
BseCI ATCGAT 1 cut(s) 380
BseDI CCNNGG 2 cut(s) 719, 720
BseGI GGATG 1 cut(s) 1128
BseLI CCNNNNNNNGG 6 cut(s) 109, 689, 720, 1071, 1199, 1232
BseMI GCAATG 1 cut(s) 1348
BseNI ACTGG 4 cut(s) 620, 684, 883, 1115
BseRI GAGGAG 4 cut(s) 429, 1118, 1195, 1396
BseXI GCAGC 4 cut(s) 268, 476, 527, 1402
BseYI CCCAGC 1 cut(s) 1353
BsgI GTGCAG 2 cut(s) 1069, 1401
BshFI GGCC 2 cut(s) 366, 705
BshVI ATCGAT 1 cut(s) 380
BsiHKAI GWGCWC 1 cut(s) 421
BsiHKCI CYCGRG 2 cut(s) 732, 962
BsiSI CCGG 5 cut(s) 222, 239, 254, 1383, 1396
BslFI GGGAC 2 cut(s) 666, 875
BslI CCNNNNNNNGG 6 cut(s) 109, 689, 720, 1071, 1199, 1232
BsmAI GTCTC 5 cut(s) 236, 260, 946, 1284, 1427
BsmBI CGTCTC 2 cut(s) 236, 1284
BsmFI GGGAC 2 cut(s) 666, 875
BsnI GGCC 2 cut(s) 366, 705
Bso31I GGTCTC 1 cut(s) 946
BsoBI CYCGRG 2 cut(s) 732, 962
Bsp1286I GDGCHC 1 cut(s) 421
Bsp13I TCCGGA 1 cut(s) 1382
Bsp143I GATC 3 cut(s) 808, 1250, 1398
BspACI CCGC 2 cut(s) 285, 992
BspANI GGCC 2 cut(s) 366, 705
BspDI ATCGAT 1 cut(s) 380
BspEI TCCGGA 1 cut(s) 1382
BspLI GGNNCC 3 cut(s) 166, 252, 1204
BspPI GGATC 2 cut(s) 1258, 1406
BspQI GCTCTTC 2 cut(s) 68, 1146
BspTNI GGTCTC 1 cut(s) 946
BsrDI GCAATG 1 cut(s) 1348
BsrI ACTGG 4 cut(s) 620, 684, 883, 1115
BssECI CCNNGG 2 cut(s) 719, 720
BssMI GATC 3 cut(s) 808, 1250, 1398
Bst2UI CCWGG 2 cut(s) 721, 1090
Bst4CI ACNGT 8 cut(s) 70, 247, 271, 349, 479, 566, 821, 1322
Bst6I CTCTTC 6 cut(s) 68, 899, 942, 1095, 1146, 1265
BstC8I GCNNGC 1 cut(s) 846
BstF5I GGATG 1 cut(s) 1128
BstH2I RGCGCY 1 cut(s) 313
BstHHI GCGC 1 cut(s) 312
BstKTI GATC 3 cut(s) 811, 1253, 1401
BstMAI GTCTC 5 cut(s) 236, 260, 946, 1284, 1427
BstMBI GATC 3 cut(s) 808, 1250, 1398
BstMWI GCNNNNNNNGC 2 cut(s) 652, 702
BstNI CCWGG 2 cut(s) 721, 1090
BstNSI RCATGY 1 cut(s) 848
BstSCI CCNGG 3 cut(s) 220, 719, 1088
BstV1I GCAGC 4 cut(s) 268, 476, 527, 1402
BstX2I RGATCY 1 cut(s) 1250
BstXI CCANNNNNNTGG 1 cut(s) 1096
BstYI RGATCY 1 cut(s) 1250
Bsu15I ATCGAT 1 cut(s) 380
BsuRI GGCC 2 cut(s) 366, 705
BsuTUI ATCGAT 1 cut(s) 380
BtsCI GGATG 1 cut(s) 1128
BtsI GCAGTG 1 cut(s) 494
BtsIMutI CAGTG 4 cut(s) 75, 91, 494, 890
Cac8I GCNNGC 1 cut(s) 846
CaiI CAGNNNCTG 2 cut(s) 275, 1415
CfoI GCGC 1 cut(s) 312
Cfr13I GGNCC 2 cut(s) 100, 704
ClaI ATCGAT 1 cut(s) 380
CseI GACGC 1 cut(s) 140
CsiI ACCWGGT 1 cut(s) 1088
Csp6I GTAC 4 cut(s) 236, 665, 925, 1044
CviAII CATG 3 cut(s) 398, 845, 1037
CviQI GTAC 4 cut(s) 236, 665, 925, 1044
DpnI GATC 3 cut(s) 810, 1252, 1400
DpnII GATC 3 cut(s) 808, 1250, 1398
DrdI GACNNNNNNGTC 1 cut(s) 1298
DriI GACNNNNNGTC 1 cut(s) 1227
DseDI GACNNNNNNGTC 1 cut(s) 1298
Eam1104I CTCTTC 6 cut(s) 68, 899, 942, 1095, 1146, 1265
Eam1105I GACNNNNNGTC 1 cut(s) 1227
EarI CTCTTC 6 cut(s) 68, 899, 942, 1095, 1146, 1265
Eco31I GGTCTC 1 cut(s) 946
Eco47I GGWCC 1 cut(s) 100
Eco47III AGCGCT 1 cut(s) 311
Eco57I CTGAAG 2 cut(s) 531, 662
Eco88I CYCGRG 2 cut(s) 732, 962
EcoO109I RGGNCCY 1 cut(s) 704
EcoRI GAATTC 2 cut(s) 7, 932
EcoRII CCWGG 2 cut(s) 719, 1088
Esp3I CGTCTC 2 cut(s) 236, 1284
FaeI CATG 3 cut(s) 401, 848, 1040
FaqI GGGAC 2 cut(s) 666, 875
FatI CATG 3 cut(s) 397, 844, 1036
FblI GTMKAC 1 cut(s) 879
Fnu4HI GCNGC 5 cut(s) 282, 285, 465, 516, 1416
FokI GGATG 1 cut(s) 1135
Fsp4HI GCNGC 5 cut(s) 282, 285, 465, 516, 1416
FspBI CTAG 2 cut(s) 182, 1232
GlaI GCGC 1 cut(s) 311
GluI GCNGC 5 cut(s) 282, 285, 465, 516, 1416
GsaI CCCAGC 1 cut(s) 1357
HaeII RGCGCY 1 cut(s) 313
HaeIII GGCC 2 cut(s) 366, 705
HapII CCGG 5 cut(s) 222, 239, 254, 1383, 1396
HgaI GACGC 1 cut(s) 140
HhaI GCGC 1 cut(s) 312
Hin1II CATG 3 cut(s) 401, 848, 1040
Hin6I GCGC 1 cut(s) 310
HinP1I GCGC 1 cut(s) 310
HincII GTYRAC 1 cut(s) 429
HindII GTYRAC 1 cut(s) 429
HinfI GANTC 9 cut(s) 20, 89, 217, 893, 995, 1228, 1299, 1427, 1435
HpaII CCGG 5 cut(s) 222, 239, 254, 1383, 1396
HphI GGTGA 3 cut(s) 38, 236, 311
Hpy166II GTNNAC 2 cut(s) 429, 880
Hpy188III TCNNGA 9 cut(s) 162, 197, 392, 451, 580, 588, 1022, 1120, 1383
Hpy8I GTNNAC 2 cut(s) 429, 880
Hpy99I CGWCG 2 cut(s) 349, 825
HpyCH4III ACNGT 8 cut(s) 70, 247, 271, 349, 479, 566, 821, 1322
HpyCH4V TGCA 3 cut(s) 464, 1086, 1418
HpyF10VI GCNNNNNNNGC 2 cut(s) 652, 702
Hsp92II CATG 3 cut(s) 401, 848, 1040
HspAI GCGC 1 cut(s) 310
Kpn2I TCCGGA 1 cut(s) 1382
Kzo9I GATC 3 cut(s) 808, 1250, 1398
LguI GCTCTTC 2 cut(s) 68, 1146
LmnI GCTCC 4 cut(s) 256, 416, 1169, 1208
Lsp1109I GCAGC 4 cut(s) 268, 476, 527, 1402
LweI GCATC 1 cut(s) 730
MabI ACCWGGT 1 cut(s) 1088
MaeI CTAG 2 cut(s) 182, 1232
MaeIII GTNAC 3 cut(s) 909, 1180, 1313
MalI GATC 3 cut(s) 810, 1252, 1400
MboI GATC 3 cut(s) 808, 1250, 1398
MboII GAAGA 8 cut(s) 85, 314, 466, 916, 959, 1112, 1163, 1282
MfeI CAATTG 1 cut(s) 647
MflI RGATCY 1 cut(s) 1250
MhlI GDGCHC 1 cut(s) 421
MluCI AATT 6 cut(s) 7, 457, 647, 836, 854, 932
MlyI GAGTC 4 cut(s) 211, 1237, 1308, 1429
MmeI TCCRAC 2 cut(s) 148, 1247
MroI TCCGGA 1 cut(s) 1382
MroXI GAANNNNTTC 2 cut(s) 636, 1155
MseI TTAA 5 cut(s) 483, 840, 869, 981, 1094
MspI CCGG 5 cut(s) 222, 239, 254, 1383, 1396
MspR9I CCNGG 3 cut(s) 222, 721, 1090
MunI CAATTG 1 cut(s) 647
MvaI CCWGG 2 cut(s) 721, 1090
MwoI GCNNNNNNNGC 2 cut(s) 652, 702
NciI CCSGG 1 cut(s) 222
NdeII GATC 3 cut(s) 808, 1250, 1398
NlaIII CATG 3 cut(s) 401, 848, 1040
NlaIV GGNNCC 3 cut(s) 166, 252, 1204
NmuCI GTSAC 2 cut(s) 909, 1313
NspI RCATGY 1 cut(s) 848
PaeI GCATGC 1 cut(s) 848
PaeR7I CTCGAG 2 cut(s) 732, 962
PasI CCCWGGG 1 cut(s) 720
PciSI GCTCTTC 2 cut(s) 68, 1146
PdmI GAANNNNTTC 2 cut(s) 636, 1155
PfeI GAWTC 5 cut(s) 20, 89, 893, 995, 1427
PkrI GCNGC 5 cut(s) 283, 286, 466, 517, 1417
PleI GAGTC 4 cut(s) 211, 1236, 1307, 1429
PpsI GAGTC 4 cut(s) 211, 1236, 1307, 1429
Psp6I CCWGG 2 cut(s) 719, 1088
PspFI CCCAGC 1 cut(s) 1353
PspGI CCWGG 2 cut(s) 719, 1088
PspN4I GGNNCC 3 cut(s) 166, 252, 1204
PspPI GGNCC 2 cut(s) 100, 704
PspXI VCTCGAGB 2 cut(s) 732, 962
PstNI CAGNNNCTG 2 cut(s) 275, 1415
PsuI RGATCY 1 cut(s) 1250
RsaI GTAC 4 cut(s) 237, 666, 926, 1045
RsaNI GTAC 4 cut(s) 236, 665, 925, 1044
SapI GCTCTTC 2 cut(s) 68, 1146
SaqAI TTAA 5 cut(s) 483, 840, 869, 981, 1094
SatI GCNGC 5 cut(s) 282, 285, 465, 516, 1416
Sau3AI GATC 3 cut(s) 808, 1250, 1398
Sau96I GGNCC 2 cut(s) 100, 704
SchI GAGTC 4 cut(s) 211, 1237, 1308, 1429
ScrFI CCNGG 3 cut(s) 222, 721, 1090
SduI GDGCHC 1 cut(s) 421
SexAI ACCWGGT 1 cut(s) 1088
SfaNI GCATC 1 cut(s) 730
Sfr274I CTCGAG 2 cut(s) 732, 962
SinI GGWCC 1 cut(s) 100
SlaI CTCGAG 2 cut(s) 732, 962
SmlI CTYRAG 5 cut(s) 197, 699, 732, 962, 1437
SmoI CTYRAG 5 cut(s) 197, 699, 732, 962, 1437
SphI GCATGC 1 cut(s) 848
Sse9I AATT 6 cut(s) 7, 457, 647, 836, 854, 932
SsiI CCGC 2 cut(s) 285, 992
SspMI CTAG 2 cut(s) 182, 1232
StyD4I CCNGG 3 cut(s) 220, 719, 1088
TaaI ACNGT 8 cut(s) 70, 247, 271, 349, 479, 566, 821, 1322
TaqI TCGA 8 cut(s) 60, 153, 215, 380, 733, 823, 902, 963
TaqII GACCGA 1 cut(s) 970
TasI AATT 6 cut(s) 7, 457, 647, 836, 854, 932
TatI WGTACW 2 cut(s) 664, 924
TauI GCSGC 1 cut(s) 287
TfiI GAWTC 5 cut(s) 20, 89, 893, 995, 1427
Tru1I TTAA 5 cut(s) 483, 840, 869, 981, 1094
Tru9I TTAA 5 cut(s) 483, 840, 869, 981, 1094
TscAI CASTG 4 cut(s) 75, 91, 494, 890
TseFI GTSAC 2 cut(s) 909, 1313
TseI GCWGC 4 cut(s) 281, 464, 515, 1415
Tsp45I GTSAC 2 cut(s) 909, 1313
TspDTI ATGAA 3 cut(s) 809, 906, 1025
TspGWI ACGGA 2 cut(s) 125, 280
TspRI CASTG 4 cut(s) 75, 91, 494, 890
VpaK11BI GGWCC 1 cut(s) 100
XapI RAATTY 4 cut(s) 7, 457, 836, 932
XceI RCATGY 1 cut(s) 848
XhoI CTCGAG 2 cut(s) 732, 962
XmiI GTMKAC 1 cut(s) 879
XmnI GAANNNNTTC 2 cut(s) 636, 1155
XspI CTAG 2 cut(s) 182, 1232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.