pycom11g18200

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000258
Physical Location & Seq
Forward (+)
20417473 .. 20419582
2110 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g18200.3

Sequence Viewer

Length: 1644 bp
ATGATTCTCAAAGCGCATGTGGTGGAGGATCATCAAAGAAATGAGAAGTATGATGCCTCATCGCTGGAGGCAAAAGCCAATACTGTGGAAGGGGGATACTCACACAAGGCAAAGCACCATCAGAAAGATAAAGGCAAAGATGCTGCAAAGAAAGCACTGACTGCTGCGAAAGGGAAAACCTTCAAGAAAATCAAAGGAGAATTCAAATCAAGCAAACATTGCAAAAAAAACAAGTTTGTTGTTGTATCTAAGGTCAATTTATTAACTAATTCCAATGACTGGTGGGTTAATATAAGAGCAACAAGGCATGTTTGTGTTGATTTGAATTTATTTGTTTCTTACCAACCAATTGATGGTGGAGAAAATTTGTACATAGGAAATGCAACTGTATCTGCCATTGTAGGGAATCAAAAAGTGACGCTCAAACTCACTTTTGGAAAAGAGCTGTCATTCACCAATCGCTCTTTGAGTAACAGAGGTTTCAAATTAGTCTTTGAATCTGATAAGTTTGTAATCACCAAGGGTGGGGTGTATGTGGGAAAAGGTTACCTGGCTGAGGGGCTCTTCAAATTGAATGTACTTTATGTTGATGCTATTAATAATAATAACAAGCCTAGTGCTTATTCTGCTTACTTGATTGAGTCCTCTATATTATGGCATGCAAGATTAGGACATGTTAATTTTCGTTCTCTTCAAAGAATGGTTAACTTAGGCCTATTGCCCAAATGTTCCATGAACAAAGTATCTAAACACGAGATATGCATAGAATCAGTGGAAAAATCCAATGAAGTACTTGGTTTAATCCATAGTGATCTTTGTGATCCACACCAACTCCAAGTACTGTTATATCTAAGAATTTTGTTTGAAACATGGAATAATACATCGAAAACAATAGCACCATATAATCCTCAACAAAACGGAGTGGCTGAATGTAAAAATCGAACATTGAAAGATATGATTAATTCCATGTTAAACAGCTCCAGTGCACCACATAATTTATGGGTCCACATAAGAAAACTAATCAATCTCCATATGAAATCTAGAAAGGTAGTTCAAGTGCCTCTTCAGAAAAGTCAAAAACTTGGACCAAAAACAGTGGATTGTATATTTATTGGTCATGCCAATAATAGTTCATCATACAGATTTTTTGTTCATAAATCTAAAATTGCAGACATTCATGTAAATACAATACTTGAATTTGTAGAAGCTGAGTTCTTTGAGGAAATTTTCCTCGATACTACGAGAAATAATGATGATAATCACGCTTCAACTTCTAGAGTCCAAAGCCAAGATTTGGAACCACGGAAGAGTAAAGAGCAAAATTTACAAAGGATTTTGGCTGCATTAGAATCCTTTGAAGTACCTTATTGGAAAGAAGCTATTCAAAGGATTTTCAAGAACAAATTGAGACCGGATGGTACCATAGACAAGAATAAAGCTCTTCTAGTTGCCAATGGGTATCGTAAAAAAGAAGGACTTGACTACTTTGACACTTATTCACCAGTAGCTAGAATAACATCTATAAGGTTGACAATAGCTATAGCGTCTATTTACAATCTTGAGATACATCAAATGGATATATATGGAACAACCAAAAGGCTTCATTGTCAAAGGTCAATAAAAGAAAGTTTGCAAATTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 gag_pre-integrs

Protein Analysis

548

Amino Acids

62.22

Weight (kDa)

9.56

Isoelectric Point (pI)

30.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000258)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00980
fragaria_vesca FvH4_1g25682 FvH4_2g13961 FvH4_2g20162 FvH4_2g24753 FvH4_3g12191 FvH4_3g12632 FvH4_3g16171 FvH4_4g05871 FvH4_4g05873 FvH4_4g10121 FvH4_4g15488 FvH4_4g23911 FvH4_4g27782 FvH4_5g08912 FvH4_5g23001 FvH4_5g24552 FvH4_5g32801 FvH4_5g32802 FvH4_6g05093 FvH4_6g19722 FvH4_6g20391 FvH4_6g33792 FvH4_7g01381 FvH4_7g16761 FvH4_7g16761 FvH4_7g16761
malus_domestica MD01G1082500.v1.1 MD15G1436400.v1.1
prunus_persica Prupe.2G021400_v2.0.a1 Prupe.2G052400_v2.0.a1 Prupe.2G065000_v2.0.a1 Prupe.2G187700_v2.0.a1 Prupe.2G187800_v2.0.a1 Prupe.2G189900_v2.0.a1 Prupe.2G191300_v2.0.a1 Prupe.2G191700_v2.0.a1 Prupe.4G265600_v2.0.a1 Prupe.7G014200_v2.0.a1 Prupe.7G039000_v2.0.a1
pyrus_communis pycom01g05590 pycom01g05910 pycom02g12230 pycom02g25840 pycom03g15580 pycom04g04480 pycom05g09230 pycom05g23350 pycom05g23360 pycom07g08380 pycom09g01980 pycom09g01990 pycom11g18190 pycom11g18200 pycom11g21580 pycom13g04160 pycom15g25800 pycom16g16210 pycom16g17230 pycom16g24560 pycom16g25700 pycom17g11020
rosa_chinensis RchiOBHm_Chr1g0359981 RchiOBHm_Chr2g0151961 RchiOBHm_Chr2g0171331 RchiOBHm_Chr5g0081471 RchiOBHm_Chr6g0283031 RchiOBHm_Chr7g0197111 RchiOBHm_Chr7g0222601
rosa_laevigata RLG00000027843 RLG00000027845 RLG00000030065
rosa_multiflora Rmu_sc0000381.1_g000031 Rmu_sc0001179.1_g000035 Rmu_sc0001616.1_g000046 Rmu_sc0001851.1_g000032 Rmu_sc0002152.1_g000013 Rmu_sc0004031.1_g000015 Rmu_sc0004645.1_g000003 Rmu_sc0007393.1_g000001 Rmu_sc0008949.1_g000003 Rmu_sc0009799.1_g000011 Rmu_sc0011614.1_g000001 Rmu_sc0011699.1_g000009 Rmu_sc0019280.1_g000001 Rmu_sc0023984.1_g000001 Rmu_ssc0000050.1_g000036
rosa_roxburghii Rroxscaffold_1G00022650 Rroxscaffold_1G00033480 Rroxscaffold_3G00270250 Rroxscaffold_4G00296600 Rroxscaffold_4G00296760 Rroxscaffold_6G00409840
rosa_rugosa Rorug01G0273800 Rorug01G0273900 Rorug01G0274000
rosa_samantha Rh1AG287300 Rh1AG288100 Rh1BG253000 Rh1BG253500 Rh1BG399800 Rh1CG270400 Rh1CG271000 Rh1DG282000 Rh1DG282500 Rh4DG126500 Rh5DG194600 Rh5DG461100
rosa_wichuraiana Rw0G009130 Rw1G002590 Rw1G008490 Rw1G012210 Rw1G014290 Rw1G014490 Rw1G025510 Rw2G025840 Rw2G026170 Rw2G036510 Rw3G003050 Rw4G009270 Rw5G002350 Rw5G013930 Rw5G019500 Rw5G025890 Rw5G029960 Rw5G032360 Rw6G009890 Rw6G015670 Rw6G015860 Rw7G010030 Rw7G032600 Rw7G032770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1418
AccB1I GGYRCC 1 cut(s) 1418
AccB7I CCANNNNNTGG 3 cut(s) 279, 353, 1294
AclWI GGATC 2 cut(s) 36, 815
AcsI RAATTY 7 cut(s) 200, 325, 364, 855, 1196, 1224, 1321
AcuI CTGAAG 1 cut(s) 1049
AfaI GTAC 6 cut(s) 371, 579, 792, 840, 1362, 1420
AfiI CCNNNNNNNGG 6 cut(s) 279, 353, 402, 525, 556, 1294
AflIII ACRYGT 1 cut(s) 673
AjnI CCWGG 1 cut(s) 549
AluBI AGCT 7 cut(s) 445, 978, 1208, 1379, 1439, 1508, 1538
AluI AGCT 7 cut(s) 445, 978, 1208, 1379, 1439, 1508, 1538
Alw21I GWGCWC 1 cut(s) 988
Alw26I GTCTC 1 cut(s) 1402
Alw44I GTGCAC 1 cut(s) 984
AlwI GGATC 2 cut(s) 36, 815
AoxI GGCC 1 cut(s) 712
ApaLI GTGCAC 1 cut(s) 984
ApeKI GCWGC 3 cut(s) 143, 164, 1340
ApoI RAATTY 7 cut(s) 200, 325, 364, 855, 1196, 1224, 1321
AseI ATTAAT 2 cut(s) 597, 960
Asp700I GAANNNNTTC 2 cut(s) 179, 1380
Asp718I GGTACC 1 cut(s) 1418
AspLEI GCGC 1 cut(s) 16
AspS9I GGNCC 2 cut(s) 1003, 1085
AsuHPI GGTGA 3 cut(s) 445, 508, 1491
AvaII GGWCC 2 cut(s) 1003, 1085
BaeGI GKGCMC 1 cut(s) 988
BanI GGYRCC 1 cut(s) 1418
BanII GRGCYC 1 cut(s) 564
BauI CACGAG 1 cut(s) 752
Bbv12I GWGCWC 1 cut(s) 988
BbvCI CCTCAGC 1 cut(s) 555
BbvI GCAGC 3 cut(s) 130, 151, 1327
BccI CCATC 3 cut(s) 126, 347, 1409
BciT130I CCWGG 1 cut(s) 551
BciVI GTATCC 1 cut(s) 89
BcoDI GTCTC 1 cut(s) 1402
BfaI CTAG 5 cut(s) 615, 1041, 1275, 1445, 1509
BfmI CTRYAG 1 cut(s) 1539
BfuI GTATCC 1 cut(s) 89
BisI GCNGC 3 cut(s) 144, 165, 1341
BlsI GCNGC 3 cut(s) 145, 166, 1342
BmcAI AGTACT 2 cut(s) 792, 840
Bme1390I CCNGG 1 cut(s) 551
Bme18I GGWCC 2 cut(s) 1003, 1085
BmgT120I GGNCC 2 cut(s) 1003, 1085
BmiI GGNNCC 3 cut(s) 1004, 1299, 1420
BmrFI CCNGG 1 cut(s) 551
BmsI GCATC 3 cut(s) 43, 130, 580
BpmI CTGGAG 2 cut(s) 86, 964
Bpu10I CCTNAGC 1 cut(s) 555
BpuEI CTTGAG 1 cut(s) 1580
BsaBI GATNNNNATC 1 cut(s) 1257
BsaI GGTCTC 1 cut(s) 1402
BsaJI CCNNGG 2 cut(s) 519, 1301
BsaWI WCCGGW 1 cut(s) 1411
BsaXI ACNNNNNCTCC 2 cut(s) 816, 846
Bsc4I CCNNNNNNNGG 6 cut(s) 279, 353, 402, 525, 556, 1294
Bse1I ACTGG 3 cut(s) 284, 981, 1502
Bse3DI GCAATG 1 cut(s) 217
Bse8I GATNNNNATC 1 cut(s) 1257
BseBI CCWGG 1 cut(s) 551
BseDI CCNNGG 2 cut(s) 519, 1301
BseGI GGATG 1 cut(s) 1420
BseJI GATNNNNATC 1 cut(s) 1257
BseLI CCNNNNNNNGG 6 cut(s) 279, 353, 402, 525, 556, 1294
BseMI GCAATG 1 cut(s) 217
BseMII CTCAG 2 cut(s) 546, 1200
BseNI ACTGG 3 cut(s) 284, 981, 1502
BseSI GKGCMC 1 cut(s) 988
BseXI GCAGC 3 cut(s) 130, 151, 1327
BshFI GGCC 1 cut(s) 714
BshNI GGYRCC 1 cut(s) 1418
BsiHKAI GWGCWC 1 cut(s) 988
BsiSI CCGG 1 cut(s) 1412
BslI CCNNNNNNNGG 6 cut(s) 279, 353, 402, 525, 556, 1294
BsmAI GTCTC 1 cut(s) 1402
BsnI GGCC 1 cut(s) 714
Bso31I GGTCTC 1 cut(s) 1402
Bsp1286I GDGCHC 2 cut(s) 564, 988
Bsp1407I TGTACA 1 cut(s) 369
Bsp143I GATC 3 cut(s) 28, 811, 820
BspANI GGCC 1 cut(s) 714
BspCNI CTCAG 2 cut(s) 547, 1201
BspLI GGNNCC 3 cut(s) 1004, 1299, 1420
BspPI GGATC 2 cut(s) 36, 815
BspQI GCTCTTC 2 cut(s) 569, 1446
BspT107I GGYRCC 1 cut(s) 1418
BspTNI GGTCTC 1 cut(s) 1402
BsrDI GCAATG 1 cut(s) 217
BsrGI TGTACA 1 cut(s) 369
BsrI ACTGG 3 cut(s) 284, 981, 1502
BssECI CCNNGG 2 cut(s) 519, 1301
BssMI GATC 3 cut(s) 28, 811, 820
BssSI CACGAG 1 cut(s) 752
BssT1I CCWWGG 1 cut(s) 519
Bst2BI CACGAG 1 cut(s) 752
Bst2UI CCWGG 1 cut(s) 551
Bst4CI ACNGT 4 cut(s) 85, 388, 843, 1096
Bst6I CTCTTC 5 cut(s) 569, 696, 1068, 1301, 1446
BstAPI GCANNNNNTGC 2 cut(s) 161, 219
BstAUI TGTACA 1 cut(s) 369
BstC8I GCNNGC 1 cut(s) 660
BstDEI CTNAG 5 cut(s) 249, 555, 709, 851, 1209
BstDSI CCRYGG 1 cut(s) 1301
BstEII GGTNACC 1 cut(s) 545
BstENI CCTNNNNNAGG 1 cut(s) 554
BstF5I GGATG 1 cut(s) 1420
BstHHI GCGC 1 cut(s) 16
BstKTI GATC 3 cut(s) 31, 814, 823
BstMAI GTCTC 1 cut(s) 1402
BstMBI GATC 3 cut(s) 28, 811, 820
BstMWI GCNNNNNNNGC 4 cut(s) 152, 161, 219, 626
BstNI CCWGG 1 cut(s) 551
BstNSI RCATGY 4 cut(s) 20, 311, 662, 677
BstPI GGTNACC 1 cut(s) 545
BstSCI CCNGG 1 cut(s) 549
BstSFI CTRYAG 1 cut(s) 1539
BstSLI GKGCMC 1 cut(s) 988
BstV1I GCAGC 3 cut(s) 130, 151, 1327
BstXI CCANNNNNNTGG 1 cut(s) 85
BsuI GTATCC 1 cut(s) 89
BsuRI GGCC 1 cut(s) 714
BtgI CCRYGG 1 cut(s) 1301
BtgZI GCGATG 1 cut(s) 45
BtsCI GGATG 1 cut(s) 1420
BtsIMutI CAGTG 4 cut(s) 155, 777, 988, 1101
Cac8I GCNNGC 1 cut(s) 660
CfoI GCGC 1 cut(s) 16
Cfr13I GGNCC 2 cut(s) 1003, 1085
CseI GACGC 2 cut(s) 427, 1533
Csp6I GTAC 6 cut(s) 370, 578, 791, 839, 1361, 1419
CspCI CAANNNNNGTGG 2 cut(s) 1077, 1112
CviAII CATG 9 cut(s) 17, 308, 659, 674, 733, 870, 967, 1118, 1178
CviQI GTAC 6 cut(s) 370, 578, 791, 839, 1361, 1419
DdeI CTNAG 5 cut(s) 249, 555, 709, 851, 1209
DpnI GATC 3 cut(s) 30, 813, 822
DpnII GATC 3 cut(s) 28, 811, 820
Eam1104I CTCTTC 5 cut(s) 569, 696, 1068, 1301, 1446
EarI CTCTTC 5 cut(s) 569, 696, 1068, 1301, 1446
Eco130I CCWWGG 1 cut(s) 519
Eco147I AGGCCT 1 cut(s) 714
Eco24I GRGCYC 1 cut(s) 564
Eco31I GGTCTC 1 cut(s) 1402
Eco47I GGWCC 2 cut(s) 1003, 1085
Eco57I CTGAAG 1 cut(s) 1049
Eco91I GGTNACC 1 cut(s) 545
EcoNI CCTNNNNNAGG 1 cut(s) 554
EcoO65I GGTNACC 1 cut(s) 545
EcoRI GAATTC 1 cut(s) 200
EcoRII CCWGG 1 cut(s) 549
EcoT14I CCWWGG 1 cut(s) 519
EcoT22I ATGCAT 1 cut(s) 764
EcoT38I GRGCYC 1 cut(s) 564
ErhI CCWWGG 1 cut(s) 519
FaeI CATG 9 cut(s) 20, 311, 662, 677, 736, 873, 970, 1121, 1181
FalI AAGNNNNNCTT 4 cut(s) 1047, 1079, 1461, 1493
FatI CATG 9 cut(s) 16, 307, 658, 673, 732, 869, 966, 1117, 1177
FauNDI CATATG 1 cut(s) 1032
Fnu4HI GCNGC 3 cut(s) 144, 165, 1341
FokI GGATG 1 cut(s) 1427
FriOI GRGCYC 1 cut(s) 564
Fsp4HI GCNGC 3 cut(s) 144, 165, 1341
FspBI CTAG 5 cut(s) 615, 1041, 1275, 1445, 1509
GlaI GCGC 1 cut(s) 15
GluI GCNGC 3 cut(s) 144, 165, 1341
GsuI CTGGAG 2 cut(s) 86, 964
HaeIII GGCC 1 cut(s) 714
HapII CCGG 1 cut(s) 1412
HgaI GACGC 2 cut(s) 427, 1533
HhaI GCGC 1 cut(s) 16
Hin1II CATG 9 cut(s) 20, 311, 662, 677, 736, 873, 970, 1121, 1181
Hin6I GCGC 1 cut(s) 14
HinP1I GCGC 1 cut(s) 14
HincII GTYRAC 2 cut(s) 706, 1530
HindII GTYRAC 2 cut(s) 706, 1530
HinfI GANTC 7 cut(s) 4, 406, 497, 641, 767, 1278, 1349
HpaI GTTAAC 1 cut(s) 706
HpaII CCGG 1 cut(s) 1412
HphI GGTGA 3 cut(s) 445, 508, 1491
Hpy166II GTNNAC 4 cut(s) 706, 986, 1006, 1530
Hpy188I TCNGA 3 cut(s) 123, 502, 1068
Hpy188III TCNNGA 5 cut(s) 184, 1041, 1275, 1396, 1559
Hpy8I GTNNAC 4 cut(s) 706, 986, 1006, 1530
HpyAV CCTTC 3 cut(s) 83, 190, 1466
HpyCH4III ACNGT 4 cut(s) 85, 388, 843, 1096
HpyCH4V TGCA 9 cut(s) 146, 222, 383, 662, 762, 986, 1169, 1343, 1633
HpyF10VI GCNNNNNNNGC 4 cut(s) 152, 161, 219, 626
HpyF3I CTNAG 5 cut(s) 249, 555, 709, 851, 1209
Hsp92II CATG 9 cut(s) 20, 311, 662, 677, 736, 873, 970, 1121, 1181
HspAI GCGC 1 cut(s) 14
KpnI GGTACC 1 cut(s) 1422
KspAI GTTAAC 1 cut(s) 706
Kzo9I GATC 3 cut(s) 28, 811, 820
LguI GCTCTTC 2 cut(s) 569, 1446
LmnI GCTCC 1 cut(s) 983
LpnPI CCDG 7 cut(s) 50, 265, 536, 563, 994, 1425, 1515
Lsp1109I GCAGC 3 cut(s) 130, 151, 1327
LweI GCATC 3 cut(s) 43, 130, 580
MaeI CTAG 5 cut(s) 615, 1041, 1275, 1445, 1509
MaeIII GTNAC 3 cut(s) 415, 470, 545
MalI GATC 3 cut(s) 30, 813, 822
MboI GATC 3 cut(s) 28, 811, 820
MboII GAAGA 5 cut(s) 556, 683, 1055, 1318, 1433
MfeI CAATTG 1 cut(s) 348
MhlI GDGCHC 2 cut(s) 564, 988
MlyI GAGTC 2 cut(s) 650, 1287
Mph1103I ATGCAT 1 cut(s) 764
MroXI GAANNNNTTC 2 cut(s) 179, 1380
MseI TTAA 9 cut(s) 263, 288, 597, 678, 705, 800, 960, 971, 1642
MslI CAYNNNNRTG 1 cut(s) 312
MspI CCGG 1 cut(s) 1412
MspR9I CCNGG 1 cut(s) 551
MunI CAATTG 1 cut(s) 348
MvaI CCWGG 1 cut(s) 551
MwoI GCNNNNNNNGC 4 cut(s) 152, 161, 219, 626
NdeI CATATG 1 cut(s) 1032
NdeII GATC 3 cut(s) 28, 811, 820
NlaIII CATG 9 cut(s) 20, 311, 662, 677, 736, 873, 970, 1121, 1181
NlaIV GGNNCC 3 cut(s) 1004, 1299, 1420
NmuCI GTSAC 1 cut(s) 415
NsiI ATGCAT 1 cut(s) 764
NspI RCATGY 4 cut(s) 20, 311, 662, 677
PaeI GCATGC 1 cut(s) 662
PceI AGGCCT 1 cut(s) 714
PciI ACATGT 1 cut(s) 673
PciSI GCTCTTC 2 cut(s) 569, 1446
PdmI GAANNNNTTC 2 cut(s) 179, 1380
PfeI GAWTC 5 cut(s) 4, 406, 497, 767, 1349
PflMI CCANNNNNTGG 3 cut(s) 279, 353, 1294
PkrI GCNGC 3 cut(s) 145, 166, 1342
PleI GAGTC 2 cut(s) 649, 1286
PpsI GAGTC 2 cut(s) 649, 1286
PscI ACATGT 1 cut(s) 673
PshBI ATTAAT 2 cut(s) 597, 960
Psp6I CCWGG 1 cut(s) 549
PspEI GGTNACC 1 cut(s) 545
PspGI CCWGG 1 cut(s) 549
PspN4I GGNNCC 3 cut(s) 1004, 1299, 1420
PspPI GGNCC 2 cut(s) 1003, 1085
RsaI GTAC 6 cut(s) 371, 579, 792, 840, 1362, 1420
RsaNI GTAC 6 cut(s) 370, 578, 791, 839, 1361, 1419
RseI CAYNNNNRTG 1 cut(s) 312
SapI GCTCTTC 2 cut(s) 569, 1446
SaqAI TTAA 9 cut(s) 263, 288, 597, 678, 705, 800, 960, 971, 1642
SatI GCNGC 3 cut(s) 144, 165, 1341
Sau3AI GATC 3 cut(s) 28, 811, 820
Sau96I GGNCC 2 cut(s) 1003, 1085
ScaI AGTACT 2 cut(s) 792, 840
SchI GAGTC 2 cut(s) 650, 1287
ScrFI CCNGG 1 cut(s) 551
SduI GDGCHC 2 cut(s) 564, 988
SfaNI GCATC 3 cut(s) 43, 130, 580
SfcI CTRYAG 1 cut(s) 1539
SinI GGWCC 2 cut(s) 1003, 1085
SmiMI CAYNNNNRTG 1 cut(s) 312
SmlI CTYRAG 1 cut(s) 1559
SmoI CTYRAG 1 cut(s) 1559
SphI GCATGC 1 cut(s) 662
SseBI AGGCCT 1 cut(s) 714
SspMI CTAG 5 cut(s) 615, 1041, 1275, 1445, 1509
StuI AGGCCT 1 cut(s) 714
StyD4I CCNGG 1 cut(s) 549
StyI CCWWGG 1 cut(s) 519
TaaI ACNGT 4 cut(s) 85, 388, 843, 1096
TaqI TCGA 3 cut(s) 884, 940, 1233
TatI WGTACW 4 cut(s) 369, 577, 790, 838
TfiI GAWTC 5 cut(s) 4, 406, 497, 767, 1349
Tru1I TTAA 9 cut(s) 263, 288, 597, 678, 705, 800, 960, 971, 1642
Tru9I TTAA 9 cut(s) 263, 288, 597, 678, 705, 800, 960, 971, 1642
TscAI CASTG 4 cut(s) 162, 777, 988, 1101
TseFI GTSAC 1 cut(s) 415
TseI GCWGC 3 cut(s) 143, 164, 1340
Tsp45I GTSAC 1 cut(s) 415
TspDTI ATGAA 7 cut(s) 749, 801, 1049, 1122, 1142, 1166, 1592
TspGWI ACGGA 2 cut(s) 933, 1318
TspRI CASTG 4 cut(s) 162, 777, 988, 1101
Van91I CCANNNNNTGG 3 cut(s) 279, 353, 1294
VneI GTGCAC 1 cut(s) 984
VpaK11BI GGWCC 2 cut(s) 1003, 1085
VspI ATTAAT 2 cut(s) 597, 960
XagI CCTNNNNNAGG 1 cut(s) 554
XapI RAATTY 7 cut(s) 200, 325, 364, 855, 1196, 1224, 1321
XbaI TCTAGA 2 cut(s) 1040, 1274
XceI RCATGY 4 cut(s) 20, 311, 662, 677
XcmI CCANNNNNNNNNTGG 2 cut(s) 350, 996
XmnI GAANNNNTTC 2 cut(s) 179, 1380
XspI CTAG 5 cut(s) 615, 1041, 1275, 1445, 1509
ZrmI AGTACT 2 cut(s) 792, 840
Zsp2I ATGCAT 1 cut(s) 764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.