gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 168 |
| AcsI | RAATTY | 1 cut(s) | 115 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 136, 152 |
| AgsI | TTSAA | 5 cut(s) | 58, 73, 221, 239, 290 |
| AoxI | GGCC | 1 cut(s) | 138 |
| ApeKI | GCWGC | 1 cut(s) | 8 |
| ApoI | RAATTY | 1 cut(s) | 115 |
| AspS9I | GGNCC | 1 cut(s) | 293 |
| AvaII | GGWCC | 1 cut(s) | 293 |
| BbsI | GAAGAC | 1 cut(s) | 227 |
| BisI | GCNGC | 1 cut(s) | 9 |
| BlsI | GCNGC | 1 cut(s) | 10 |
| Bme18I | GGWCC | 1 cut(s) | 293 |
| BmgT120I | GGNCC | 1 cut(s) | 293 |
| BmiI | GGNNCC | 1 cut(s) | 64 |
| BpiI | GAAGAC | 1 cut(s) | 227 |
| BsaJI | CCNNGG | 1 cut(s) | 147 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 136, 152 |
| BseDI | CCNNGG | 1 cut(s) | 147 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 136, 152 |
| BshFI | GGCC | 1 cut(s) | 140 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 136, 152 |
| BsnI | GGCC | 1 cut(s) | 140 |
| BspANI | GGCC | 1 cut(s) | 140 |
| BspHI | TCATGA | 1 cut(s) | 111 |
| BspLI | GGNNCC | 1 cut(s) | 64 |
| BssECI | CCNNGG | 1 cut(s) | 147 |
| BssT1I | CCWWGG | 1 cut(s) | 147 |
| Bst4CI | ACNGT | 1 cut(s) | 233 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 134 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstV2I | GAAGAC | 1 cut(s) | 227 |
| BsuRI | GGCC | 1 cut(s) | 140 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| CciI | TCATGA | 1 cut(s) | 111 |
| Cfr13I | GGNCC | 1 cut(s) | 293 |
| CviAII | CATG | 1 cut(s) | 112 |
| CviJI | RGCY | 6 cut(s) | 122, 140, 145, 182, 248, 278 |
| CviKI_1 | RGCY | 6 cut(s) | 122, 140, 145, 182, 248, 278 |
| Eco130I | CCWWGG | 1 cut(s) | 147 |
| Eco32I | GATATC | 1 cut(s) | 270 |
| Eco47I | GGWCC | 1 cut(s) | 293 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 134 |
| EcoRV | GATATC | 1 cut(s) | 270 |
| EcoT14I | CCWWGG | 1 cut(s) | 147 |
| ErhI | CCWWGG | 1 cut(s) | 147 |
| FaeI | CATG | 1 cut(s) | 115 |
| FaiI | YATR | 4 cut(s) | 113, 168, 210, 298 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 50, 82 |
| FatI | CATG | 1 cut(s) | 111 |
| Fnu4HI | GCNGC | 1 cut(s) | 9 |
| FokI | GGATG | 1 cut(s) | 17 |
| Fsp4HI | GCNGC | 1 cut(s) | 9 |
| GluI | GCNGC | 1 cut(s) | 9 |
| HaeIII | GGCC | 1 cut(s) | 140 |
| Hin1II | CATG | 1 cut(s) | 115 |
| HinfI | GANTC | 1 cut(s) | 28 |
| Hpy188I | TCNGA | 1 cut(s) | 215 |
| Hpy188III | TCNNGA | 4 cut(s) | 32, 112, 133, 239 |
| HpyAV | CCTTC | 4 cut(s) | 76, 130, 146, 284 |
| HpyCH4III | ACNGT | 1 cut(s) | 233 |
| HpyCH4V | TGCA | 1 cut(s) | 208 |
| Hsp92II | CATG | 1 cut(s) | 115 |
| LpnPI | CCDG | 1 cut(s) | 45 |
| MboII | GAAGA | 3 cut(s) | 61, 227, 233 |
| MluCI | AATT | 3 cut(s) | 115, 163, 216 |
| MnlI | CCTC | 2 cut(s) | 113, 140 |
| NlaIII | CATG | 1 cut(s) | 115 |
| NlaIV | GGNNCC | 1 cut(s) | 64 |
| PagI | TCATGA | 1 cut(s) | 111 |
| PfeI | GAWTC | 1 cut(s) | 28 |
| PkrI | GCNGC | 1 cut(s) | 10 |
| PsiI | TTATAA | 1 cut(s) | 168 |
| PspN4I | GGNNCC | 1 cut(s) | 64 |
| PspPI | GGNCC | 1 cut(s) | 293 |
| SatI | GCNGC | 1 cut(s) | 9 |
| Sau96I | GGNCC | 1 cut(s) | 293 |
| SetI | ASST | 4 cut(s) | 80, 132, 157, 295 |
| SinI | GGWCC | 1 cut(s) | 293 |
| Sse9I | AATT | 3 cut(s) | 115, 163, 216 |
| StyI | CCWWGG | 1 cut(s) | 147 |
| TaaI | ACNGT | 1 cut(s) | 233 |
| TaqI | TCGA | 1 cut(s) | 105 |
| TasI | AATT | 3 cut(s) | 115, 163, 216 |
| TfiI | GAWTC | 1 cut(s) | 28 |
| TseI | GCWGC | 1 cut(s) | 8 |
| TspDTI | ATGAA | 1 cut(s) | 128 |
| TspGWI | ACGGA | 1 cut(s) | 88 |
| VpaK11BI | GGWCC | 1 cut(s) | 293 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 134 |
| XapI | RAATTY | 1 cut(s) | 115 |