FvH4_7g16761

Transcriptional Coactivator p15 (PC4)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000258
Physical Location & Seq
Forward (+)
14328398 .. 14331293
2896 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g16761.t1

Sequence Viewer

Length: 1695 bp
ATGGAGCCGGAAAGTTGCCGGAAAATCGAGGAGACGGTGGTGGACATACTGAGGAGTACGAGCTTGGATGAGATGTCCGAGTTCAAAGTCCGAGCCGCCGCCTCGGAGCGACTCGGAATCGATCTCTCCGATGTGGAGCGGAAGAGCTTCGTCCGCGGCGTGGTCGAGAGCTTCCTGATTTCCACGGCGGAGGCGGCGGCGCCGGAGTCGGAGCCGCCGGGCGTTGGGGAAGAGAAAGAGGCGAGGTTGAAGAAGGAGGCGAATGAGGACGGCGAGCGTTTTATTTGTAAGCTGTCGAACAAGAGAAATGTGGTGATTCATGATTTCAGAGGGAAAACTTTGGTGTCGATTAGGGAATTCTATAAGAAAGGTGGAAAGGAGCTTCCTAGTGCCAGAGGAATTAGCTTGCCAGCTGAACAATGGACAACGTTCAAAAATAGTGTCCCTGCAATAGAGGAAGCAATTAAAAAGATGGAATCGAAGTTAAGATCTGAAATTAATAGTAAACGAACCGAAGATGGTAAAGAAGCTGAAGATTTTAAACAAGCAGAAGATGGCAAACAAACTGAAAGTAGCAAACAAATTGAAAATGGTAAACAAGCTGAAGATGGCAAACGAACTGAAGGTAGCAAACAAATTGAAAACGGCAAACGAAATGAAGATGGTAAACAAGCTGAAGGTGGCAAACAATCTGAAATTAGCAAACGAATCGAAGATAGCGAACAAAATGAAGATGGTAAACAAACTGAAGATGCTAGACAAAGTGAGGACATCTCTGCTTCACTGAATGGTGTTGCTCCTCATGAATTTTTCTCCATTGAAACTAGCCGTTTTAATGGGAAGAACTACCCAATCTGGGCACAACAAATGGAGTTTCTGCTAAAGCAATTGAAAATTGGATATGTGCTTTTTGTTTCATGCCCAGTCATTACACTAGGCCCAGAAGCAAGTACCGACGAAATTGCTCAAGCAAAGGCTGCTGAACAGAAATGGATGAATGATGATTTTGTGTGCCGTCGCAGCATTTTGAATGCTCTATCTGATGATCTGCTAAATCTTTACGCAAGGAAAACTACTACTGCAAGAGAACTGTGGGAAGATTTAAAACTATTGCATCTTTATGAGAAATTCGGAACAAAGAGATCTCTGGTTAAGAAGTACATGGAATTTCAGATGCTTGAAGGAAGACTGGTTTTGGATCAAATTCAAGAATTTAATGACATTGCCGATTCCATTGTCGCTTCTGGAATGGTGGTTGAGGAGAAATTTCATGTCGGTGCCGTTATCTCCAAGCTTCCCTCATCTTGGAAGGATGTGAGTATCAAGTTGATGTCTGAGGAGCATTTACCTTTTGCAAAGCTGATGGATCGGTTGAGGTTTGAAGAAGACTTGCGCATCAGGGAGCAGCAGGGATTACCGATTAATCACATAGGTCATCCACAAGTTAATCATGTAGGTAATCCACCAGTGAAACCCATACCAAGGATGAGAGATACGAAGCAGCGAAATATGCAATGGAAGAGATCGGACTCAGAGATTGATGGTAGAGTAATATGCCAATTCTGTGGCAAGAAGGGGCACATATCTCAGAACTGTCGGTATAATAATAAGAGGAAATTTACCAAGCTCGATGATAGTCATGATGGATCTATGCCTATGGAGGTTAACATGCTGGAGGGGACTGTGGATGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DEK_C PC4 Retrotran_gag_2 zf-CCHC

Protein Analysis

565

Amino Acids

64.05

Weight (kDa)

5.82

Isoelectric Point (pI)

58.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEK_C PF08766 5 - 59 5.6e-12 DEK C terminal domain
PC4 PF02229 96 - 146 6.6e-18 Transcriptional Coactivator p15 (PC4)
Retrotran_gag_2 PF14223 319 - 465 3.4e-19 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000258)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00980
fragaria_vesca FvH4_1g25682 FvH4_2g13961 FvH4_2g20162 FvH4_2g24753 FvH4_3g12191 FvH4_3g12632 FvH4_3g16171 FvH4_4g05871 FvH4_4g05873 FvH4_4g10121 FvH4_4g15488 FvH4_4g23911 FvH4_4g27782 FvH4_5g08912 FvH4_5g23001 FvH4_5g24552 FvH4_5g32801 FvH4_5g32802 FvH4_6g05093 FvH4_6g19722 FvH4_6g20391 FvH4_6g33792 FvH4_7g01381 FvH4_7g16761 FvH4_7g16761 FvH4_7g16761
malus_domestica MD01G1082500.v1.1 MD15G1436400.v1.1
prunus_persica Prupe.2G021400_v2.0.a1 Prupe.2G052400_v2.0.a1 Prupe.2G065000_v2.0.a1 Prupe.2G187700_v2.0.a1 Prupe.2G187800_v2.0.a1 Prupe.2G189900_v2.0.a1 Prupe.2G191300_v2.0.a1 Prupe.2G191700_v2.0.a1 Prupe.4G265600_v2.0.a1 Prupe.7G014200_v2.0.a1 Prupe.7G039000_v2.0.a1
pyrus_communis pycom01g05590 pycom01g05910 pycom02g12230 pycom02g25840 pycom03g15580 pycom04g04480 pycom05g09230 pycom05g23350 pycom05g23360 pycom07g08380 pycom09g01980 pycom09g01990 pycom11g18190 pycom11g18200 pycom11g21580 pycom13g04160 pycom15g25800 pycom16g16210 pycom16g17230 pycom16g24560 pycom16g25700 pycom17g11020
rosa_chinensis RchiOBHm_Chr1g0359981 RchiOBHm_Chr2g0151961 RchiOBHm_Chr2g0171331 RchiOBHm_Chr5g0081471 RchiOBHm_Chr6g0283031 RchiOBHm_Chr7g0197111 RchiOBHm_Chr7g0222601
rosa_laevigata RLG00000027843 RLG00000027845 RLG00000030065
rosa_multiflora Rmu_sc0000381.1_g000031 Rmu_sc0001179.1_g000035 Rmu_sc0001616.1_g000046 Rmu_sc0001851.1_g000032 Rmu_sc0002152.1_g000013 Rmu_sc0004031.1_g000015 Rmu_sc0004645.1_g000003 Rmu_sc0007393.1_g000001 Rmu_sc0008949.1_g000003 Rmu_sc0009799.1_g000011 Rmu_sc0011614.1_g000001 Rmu_sc0011699.1_g000009 Rmu_sc0019280.1_g000001 Rmu_sc0023984.1_g000001 Rmu_ssc0000050.1_g000036
rosa_roxburghii Rroxscaffold_1G00022650 Rroxscaffold_1G00033480 Rroxscaffold_3G00270250 Rroxscaffold_4G00296600 Rroxscaffold_4G00296760 Rroxscaffold_6G00409840
rosa_rugosa Rorug01G0273800 Rorug01G0273900 Rorug01G0274000
rosa_samantha Rh1AG287300 Rh1AG288100 Rh1BG253000 Rh1BG253500 Rh1BG399800 Rh1CG270400 Rh1CG271000 Rh1DG282000 Rh1DG282500 Rh4DG126500 Rh5DG194600 Rh5DG461100
rosa_wichuraiana Rw0G009130 Rw1G002590 Rw1G008490 Rw1G012210 Rw1G014290 Rw1G014490 Rw1G025510 Rw2G025840 Rw2G026170 Rw2G036510 Rw3G003050 Rw4G009270 Rw5G002350 Rw5G013930 Rw5G019500 Rw5G025890 Rw5G029960 Rw5G032360 Rw6G009890 Rw6G015670 Rw6G015860 Rw7G010030 Rw7G032600 Rw7G032770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1394
AccB1I GGYRCC 2 cut(s) 199, 1277
AccBSI CCGCTC 1 cut(s) 139
AccII CGCG 1 cut(s) 156
AciI CCGC 9 cut(s) 96, 99, 139, 154, 156, 188, 194, 197, 215
AclI AACGTT 1 cut(s) 428
AclWI GGATC 3 cut(s) 1206, 1374, 1654
AcsI RAATTY 8 cut(s) 356, 806, 1127, 1166, 1203, 1211, 1265, 1616
AcuI CTGAAG 5 cut(s) 552, 624, 642, 696, 768
AcyI GRCGYC 1 cut(s) 200
AfaI GTAC 3 cut(s) 58, 952, 1160
AfiI CCNNNNNNNGG 5 cut(s) 160, 224, 856, 1305, 1482
Alw26I GTCTC 1 cut(s) 26
AlwI GGATC 3 cut(s) 1206, 1374, 1654
AoxI GGCC 1 cut(s) 937
ApeKI GCWGC 4 cut(s) 977, 1020, 1405, 1501
ApoI RAATTY 8 cut(s) 356, 806, 1127, 1166, 1203, 1211, 1265, 1616
ArsI GACNNNNNNTTYG 2 cut(s) 426, 458
AseI ATTAAT 2 cut(s) 498, 1422
Asp700I GAANNNNTTC 1 cut(s) 146
AspLEI GCGC 2 cut(s) 202, 1395
AspS9I GGNCC 1 cut(s) 938
AsuC2I CCSGG 1 cut(s) 219
AsuHPI GGTGA 1 cut(s) 325
BaeGI GKGCMC 2 cut(s) 862, 1581
BanI GGYRCC 2 cut(s) 199, 1277
BbsI GAAGAC 2 cut(s) 1192, 1392
BbvI GCAGC 4 cut(s) 964, 1032, 1417, 1513
BceAI ACGGC 6 cut(s) 201, 286, 661, 813, 999, 1265
BcgI CGANNNNNNTGC 4 cut(s) 691, 725, 944, 978
BcnI CCSGG 1 cut(s) 219
BcoDI GTCTC 1 cut(s) 26
BfaI CTAG 4 cut(s) 387, 756, 825, 935
BfoI RGCGCY 1 cut(s) 203
BglII AGATCT 2 cut(s) 488, 1142
Bme1390I CCNGG 1 cut(s) 219
BmgT120I GGNCC 1 cut(s) 938
BmiI GGNNCC 4 cut(s) 6, 201, 213, 1279
BmrFI CCNGG 1 cut(s) 219
BmrI ACTGGG 1 cut(s) 917
BmsI GCATC 4 cut(s) 742, 1123, 1164, 1404
BmuI ACTGGG 1 cut(s) 917
BpiI GAAGAC 2 cut(s) 1192, 1392
BplI GAGNNNNNCTC 2 cut(s) 758, 790
BpmI CTGGAG 1 cut(s) 1694
BpuEI CTTGAG 1 cut(s) 951
BpuMI CCSGG 1 cut(s) 219
Bsa29I ATCGAT 1 cut(s) 120
BsaHI GRCGYC 1 cut(s) 200
BsaJI CCNNGG 4 cut(s) 102, 154, 183, 1481
Bsc4I CCNNNNNNNGG 5 cut(s) 160, 224, 856, 1305, 1482
Bse1I ACTGG 3 cut(s) 923, 1194, 1466
Bse3DI GCAATG 2 cut(s) 1221, 1520
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 4 cut(s) 102, 154, 183, 1481
BseGI GGATG 6 cut(s) 73, 999, 1318, 1435, 1491, 1693
BseLI CCNNNNNNNGG 5 cut(s) 160, 224, 856, 1305, 1482
BseMI GCAATG 2 cut(s) 1221, 1520
BseMII CTCAG 4 cut(s) 41, 1326, 1545, 1601
BseNI ACTGG 3 cut(s) 923, 1194, 1466
BseRI GAGGAG 5 cut(s) 44, 67, 789, 1274, 1352
BseSI GKGCMC 2 cut(s) 862, 1581
BseXI GCAGC 4 cut(s) 964, 1032, 1417, 1513
Bsh1236I CGCG 1 cut(s) 156
BshFI GGCC 1 cut(s) 939
BshNI GGYRCC 2 cut(s) 199, 1277
BshVI ATCGAT 1 cut(s) 120
BsiSI CCGG 4 cut(s) 8, 19, 203, 218
BslFI GGGAC 1 cut(s) 428
BslI CCNNNNNNNGG 5 cut(s) 160, 224, 856, 1305, 1482
BsmAI GTCTC 1 cut(s) 26
BsmBI CGTCTC 1 cut(s) 26
BsmFI GGGAC 1 cut(s) 428
BsmI GAATGC 1 cut(s) 1036
BsnI GGCC 1 cut(s) 939
Bsp1286I GDGCHC 2 cut(s) 862, 1581
Bsp143I GATC 8 cut(s) 121, 488, 1045, 1142, 1198, 1366, 1523, 1646
BspACI CCGC 9 cut(s) 96, 99, 139, 154, 156, 188, 194, 197, 215
BspANI GGCC 1 cut(s) 939
BspCNI CTCAG 4 cut(s) 42, 1327, 1544, 1600
BspDI ATCGAT 1 cut(s) 120
BspFNI CGCG 1 cut(s) 156
BspHI TCATGA 3 cut(s) 319, 802, 1639
BspLI GGNNCC 4 cut(s) 6, 201, 213, 1279
BspPI GGATC 3 cut(s) 1206, 1374, 1654
BspQI GCTCTTC 1 cut(s) 137
BspT107I GGYRCC 2 cut(s) 199, 1277
BsrBI CCGCTC 1 cut(s) 139
BsrDI GCAATG 2 cut(s) 1221, 1520
BsrI ACTGG 3 cut(s) 923, 1194, 1466
BssECI CCNNGG 4 cut(s) 102, 154, 183, 1481
BssMI GATC 8 cut(s) 121, 488, 1045, 1142, 1198, 1366, 1523, 1646
BssNI GRCGYC 1 cut(s) 200
BssT1I CCWWGG 1 cut(s) 1481
Bst4CI ACNGT 4 cut(s) 37, 1092, 1595, 1684
Bst6I CTCTTC 3 cut(s) 137, 225, 1514
BstACI GRCGYC 1 cut(s) 200
BstAPI GCANNNNNTGC 1 cut(s) 977
BstC8I GCNNGC 3 cut(s) 275, 407, 411
BstDEI CTNAG 4 cut(s) 50, 1335, 1531, 1587
BstDSI CCRYGG 2 cut(s) 154, 183
BstF5I GGATG 6 cut(s) 73, 999, 1318, 1435, 1491, 1693
BstFNI CGCG 1 cut(s) 156
BstH2I RGCGCY 1 cut(s) 203
BstHHI GCGC 2 cut(s) 202, 1395
BstKTI GATC 8 cut(s) 124, 491, 1048, 1145, 1201, 1369, 1526, 1649
BstMAI GTCTC 1 cut(s) 26
BstMBI GATC 8 cut(s) 121, 488, 1045, 1142, 1198, 1366, 1523, 1646
BstMWI GCNNNNNNNGC 5 cut(s) 153, 194, 977, 1020, 1510
BstNSI RCATGY 1 cut(s) 1672
BstSCI CCNGG 1 cut(s) 217
BstSLI GKGCMC 2 cut(s) 862, 1581
BstUI CGCG 1 cut(s) 156
BstV1I GCAGC 4 cut(s) 964, 1032, 1417, 1513
BstV2I GAAGAC 2 cut(s) 1192, 1392
BstX2I RGATCY 3 cut(s) 488, 1142, 1646
BstXI CCANNNNNNTGG 1 cut(s) 1565
BstYI RGATCY 3 cut(s) 488, 1142, 1646
Bsu15I ATCGAT 1 cut(s) 120
BsuRI GGCC 1 cut(s) 939
BsuTUI ATCGAT 1 cut(s) 120
BtgI CCRYGG 2 cut(s) 154, 183
BtsCI GGATG 6 cut(s) 73, 999, 1318, 1435, 1491, 1693
BtsIMutI CAGTG 2 cut(s) 782, 1473
Cac8I GCNNGC 3 cut(s) 275, 407, 411
CciI TCATGA 3 cut(s) 319, 802, 1639
CfoI GCGC 2 cut(s) 202, 1395
Cfr13I GGNCC 1 cut(s) 938
Cfr42I CCGCGG 1 cut(s) 157
ClaI ATCGAT 1 cut(s) 120
Csp6I GTAC 3 cut(s) 57, 951, 1159
CviAII CATG 8 cut(s) 320, 803, 918, 1162, 1271, 1451, 1640, 1669
CviQI GTAC 3 cut(s) 57, 951, 1159
DdeI CTNAG 4 cut(s) 50, 1335, 1531, 1587
DinI GGCGCC 1 cut(s) 201
DpnI GATC 8 cut(s) 123, 490, 1047, 1144, 1200, 1368, 1525, 1648
DpnII GATC 8 cut(s) 121, 488, 1045, 1142, 1198, 1366, 1523, 1646
DraI TTTAAA 2 cut(s) 541, 1104
Eam1104I CTCTTC 3 cut(s) 137, 225, 1514
EarI CTCTTC 3 cut(s) 137, 225, 1514
EciI GGCGGA 1 cut(s) 203
Eco130I CCWWGG 1 cut(s) 1481
Eco57I CTGAAG 5 cut(s) 552, 624, 642, 696, 768
EcoRI GAATTC 1 cut(s) 356
EcoT14I CCWWGG 1 cut(s) 1481
EgeI GGCGCC 1 cut(s) 201
EheI GGCGCC 1 cut(s) 201
ErhI CCWWGG 1 cut(s) 1481
Esp3I CGTCTC 1 cut(s) 26
FaeI CATG 8 cut(s) 323, 806, 921, 1165, 1274, 1454, 1643, 1672
FaqI GGGAC 1 cut(s) 428
FatI CATG 8 cut(s) 319, 802, 917, 1161, 1270, 1450, 1639, 1668
FokI GGATG 5 cut(s) 80, 1006, 1325, 1422, 1498
FspBI CTAG 4 cut(s) 387, 756, 825, 935
FspI TGCGCA 1 cut(s) 1394
GlaI GCGC 2 cut(s) 201, 1394
GsuI CTGGAG 1 cut(s) 1694
HaeII RGCGCY 1 cut(s) 203
HaeIII GGCC 1 cut(s) 939
HapII CCGG 4 cut(s) 8, 19, 203, 218
HhaI GCGC 2 cut(s) 202, 1395
Hin1I GRCGYC 1 cut(s) 200
Hin1II CATG 8 cut(s) 323, 806, 921, 1165, 1274, 1454, 1643, 1672
Hin6I GCGC 2 cut(s) 200, 1393
HinP1I GCGC 2 cut(s) 200, 1393
HincII GTYRAC 1 cut(s) 1666
HindII GTYRAC 1 cut(s) 1666
HindIII AAGCTT 1 cut(s) 1292
HinfI GANTC 8 cut(s) 111, 117, 206, 316, 476, 708, 1229, 1529
HpaI GTTAAC 1 cut(s) 1666
HpaII CCGG 4 cut(s) 8, 19, 203, 218
HphI GGTGA 1 cut(s) 325
Hpy166II GTNNAC 6 cut(s) 43, 506, 596, 668, 740, 1666
Hpy188III TCNNGA 7 cut(s) 166, 175, 320, 803, 1208, 1245, 1640
Hpy8I GTNNAC 6 cut(s) 43, 506, 596, 668, 740, 1666
Hpy99I CGWCG 2 cut(s) 959, 1020
HpyAV CCTTC 6 cut(s) 247, 617, 671, 1175, 1303, 1567
HpyCH4III ACNGT 4 cut(s) 37, 1092, 1595, 1684
HpyCH4IV ACGT 1 cut(s) 428
HpyCH4V TGCA 5 cut(s) 449, 1082, 1114, 1355, 1513
HpyF10VI GCNNNNNNNGC 5 cut(s) 153, 194, 977, 1020, 1510
HpyF3I CTNAG 4 cut(s) 50, 1335, 1531, 1587
HpySE526I ACGT 1 cut(s) 428
Hsp92I GRCGYC 1 cut(s) 200
Hsp92II CATG 8 cut(s) 323, 806, 921, 1165, 1274, 1454, 1643, 1672
HspAI GCGC 2 cut(s) 200, 1393
KasI GGCGCC 1 cut(s) 199
KspAI GTTAAC 1 cut(s) 1666
KspI CCGCGG 1 cut(s) 157
Kzo9I GATC 8 cut(s) 121, 488, 1045, 1142, 1198, 1366, 1523, 1646
LguI GCTCTTC 1 cut(s) 137
LmnI GCTCC 8 cut(s) 4, 106, 136, 211, 379, 802, 1339, 1402
Lsp1109I GCAGC 4 cut(s) 964, 1032, 1417, 1513
LweI GCATC 4 cut(s) 742, 1123, 1164, 1404
MaeI CTAG 4 cut(s) 387, 756, 825, 935
MaeII ACGT 1 cut(s) 428
MalI GATC 8 cut(s) 123, 490, 1047, 1144, 1200, 1368, 1525, 1648
MbiI CCGCTC 1 cut(s) 139
MboI GATC 8 cut(s) 121, 488, 1045, 1142, 1198, 1366, 1523, 1646
MfeI CAATTG 1 cut(s) 887
MflI RGATCY 3 cut(s) 488, 1142, 1646
MhlI GDGCHC 2 cut(s) 862, 1581
Mly113I GGCGCC 1 cut(s) 200
MlyI GAGTC 3 cut(s) 105, 215, 1523
MmeI TCCRAC 1 cut(s) 189
MroXI GAANNNNTTC 1 cut(s) 146
MslI CAYNNNNRTG 2 cut(s) 1119, 1275
MspA1I CMGCKG 2 cut(s) 156, 413
MspI CCGG 4 cut(s) 8, 19, 203, 218
MspR9I CCNGG 1 cut(s) 219
MunI CAATTG 1 cut(s) 887
Mva1269I GAATGC 1 cut(s) 1036
MvnI CGCG 1 cut(s) 156
MwoI GCNNNNNNNGC 5 cut(s) 153, 194, 977, 1020, 1510
NarI GGCGCC 1 cut(s) 200
NciI CCSGG 1 cut(s) 219
NdeII GATC 8 cut(s) 121, 488, 1045, 1142, 1198, 1366, 1523, 1646
NlaIII CATG 8 cut(s) 323, 806, 921, 1165, 1274, 1454, 1643, 1672
NlaIV GGNNCC 4 cut(s) 6, 201, 213, 1279
NsbI TGCGCA 1 cut(s) 1394
NspI RCATGY 1 cut(s) 1672
PagI TCATGA 3 cut(s) 319, 802, 1639
PciSI GCTCTTC 1 cut(s) 137
PcsI WCGNNNNNNNCGW 3 cut(s) 126, 156, 717
PctI GAATGC 1 cut(s) 1036
PdmI GAANNNNTTC 1 cut(s) 146
PfeI GAWTC 5 cut(s) 117, 316, 476, 708, 1229
PleI GAGTC 3 cut(s) 105, 214, 1523
PluTI GGCGCC 1 cut(s) 203
PpsI GAGTC 3 cut(s) 105, 214, 1523
PshBI ATTAAT 2 cut(s) 498, 1422
Psp1406I AACGTT 1 cut(s) 428
PspN4I GGNNCC 4 cut(s) 6, 201, 213, 1279
PspPI GGNCC 1 cut(s) 938
PsuI RGATCY 3 cut(s) 488, 1142, 1646
PvuII CAGCTG 1 cut(s) 413
RsaI GTAC 3 cut(s) 58, 952, 1160
RsaNI GTAC 3 cut(s) 57, 951, 1159
RseI CAYNNNNRTG 2 cut(s) 1119, 1275
SacII CCGCGG 1 cut(s) 157
SapI GCTCTTC 1 cut(s) 137
Sau3AI GATC 8 cut(s) 121, 488, 1045, 1142, 1198, 1366, 1523, 1646
Sau96I GGNCC 1 cut(s) 938
SchI GAGTC 3 cut(s) 105, 215, 1523
ScrFI CCNGG 1 cut(s) 219
SduI GDGCHC 2 cut(s) 862, 1581
SfaNI GCATC 4 cut(s) 742, 1123, 1164, 1404
SfoI GGCGCC 1 cut(s) 201
Sfr303I CCGCGG 1 cut(s) 157
SgrBI CCGCGG 1 cut(s) 157
SmiMI CAYNNNNRTG 2 cut(s) 1119, 1275
SmlI CTYRAG 1 cut(s) 966
SmoI CTYRAG 1 cut(s) 966
SsiI CCGC 9 cut(s) 96, 99, 139, 154, 156, 188, 194, 197, 215
SspDI GGCGCC 1 cut(s) 199
SspMI CTAG 4 cut(s) 387, 756, 825, 935
StyD4I CCNGG 1 cut(s) 217
StyI CCWWGG 1 cut(s) 1481
TaaI ACNGT 4 cut(s) 37, 1092, 1595, 1684
TaiI ACGT 1 cut(s) 431
TaqI TCGA 8 cut(s) 27, 120, 165, 296, 347, 479, 711, 1629
TatI WGTACW 1 cut(s) 1158
TauI GCSGC 6 cut(s) 98, 101, 159, 197, 200, 217
TfiI GAWTC 5 cut(s) 117, 316, 476, 708, 1229
TscAI CASTG 2 cut(s) 789, 1473
TseI GCWGC 4 cut(s) 977, 1020, 1405, 1501
TspDTI ATGAA 7 cut(s) 308, 672, 744, 819, 906, 1010, 1259
TspRI CASTG 2 cut(s) 789, 1473
VspI ATTAAT 2 cut(s) 498, 1422
XapI RAATTY 8 cut(s) 356, 806, 1127, 1166, 1203, 1211, 1265, 1616
XceI RCATGY 1 cut(s) 1672
XcmI CCANNNNNNNNNTGG 1 cut(s) 417
XmnI GAANNNNTTC 1 cut(s) 146
XspI CTAG 4 cut(s) 387, 756, 825, 935
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.