FvH4_2g05601

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000135
Physical Location & Seq
Reverse (-)
4593537 .. 4596436
2900 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g05601.t1

Sequence Viewer

Length: 1632 bp
ATGAAAGGAAAGTTCTTCATTGCTACCAGTTTGCTTGAACCACAGCTCGAGCAGATCTTAGATGAACATCGTCCTCATTGCCTTGTTGTTGATGCTTTCTTTCCATTTGCTACTGATGTTGCTGCTAAGTTTGGAATTCCAAGGCTATATTTTCATGGAACTGGTTTCTTCCCTTTGTGTGCTTCATTGAGTGTGAAGATATATCAACCTTACATGAAATTGTCTACCGACTCAGACTTTTTAAGGAAGGTGTTTGGGAGGAAGGCATGGCATATTGGCCTAGTTTCATCATGCAACAAGGCAACAGATAAAGAAAAGAAAGAGTCCAGAAGCCCACTTGTGATTAAAAATCTGAAAGTGTCGACAGATAAACTGAAAGTGTCACACAAACTGAAAGGGTTTATGCTTGTTGGATTGCCGGAAGGGTGTGAGAGCGCTCACATGGTCCAAGGGTATGAAGACCTCCAAAAGTTCTTGAAGGCTACCGCCATGCTAGAGCAACCACTTGAGAAGCTGATCAAAGAACACAGACCCAATTGTCTTGAGGCCGACATTTACTTCCCATGGACAACTGATCTTGCTGCAAGGTTTGGAATTCCAAGGCTAGTTTTCCATGGAACAAATTTCATCTCTCAATCAGTCTCATATCATTTGATGAAAATGGACCTCACAAACGTGTCCGATTCCGAACCACTTGTCATTCCCAATTTACCACATGAGTTCAAGATTCCAGGAAACCAAATCCCTGGCTTCATGAAACAAGAATCTGAGTTGAAACGTTTCGGCCAATCGGCTGCTGAATCGGAGAGGAGGAGCTTTGGGGTTATTGTTAACAGTTTCTATGAGATTGAACCAGCTTATGTTGACCATTATAGAAACGTTCTGGGAATCAAAGCTTGGCATATAGGCCCAACGTTTCTATGCCACAAGGAGATTGAAGATAAGGCACATAGAGGACTAGAAAACTCCATACATGGACATGAATGCCAGAAATGGCTAGATTCGAAGAAACCCAACTCAGTAATCTATGTGAGCTTTGGCAGTGTGGTCAAGTTTGATGATGCTCAGCTCATGGAAATTGCTTTGGAACTTGAAGCTTCAAGGCAACAATTCATATGGGTGGTTAAGAAAGATGAAAAGAAGGATCAAGAAAGTAATGAGGATTGGTTGCCTGAAGGGTTTGAGAAGCGAGTTGAAGGCAGAGGACAAGTTATAAGAGGCTGGGCTCCTCAAGTGCAGATTCTGGAACACGTGGCGGTCGGAGGGTTTGTGACACATTGTGGGTGGAACTCGACGCTTGAAGCAGTGTCTGCTGGAGTTCCTATGGCTACGTGGCCGGCGTTCGCTGACCAGTTTTACAATGAGAAGCTGGTGACTCAAATACTTGGCATTGGGGTTGGTGTTGGTGTTTCAAACTGGGCTAGATTTGGAGGGGAAAGAGTGAAGAGTGAAGCTATAAAGAAGGTGGTGAAGCAGATAATGGTGGGTGAGGAAGCAGAGGAAATGAGAAGCAGAGCCAAGAAGTTTGGAGAAATGGCAAGAATGAGTGTGAAGGAAGCCGGATCATCATACAAGGATTTGAATCGCTTGATTGAAGAATTGGGGATCCATACCGCTGCTCCCAACCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

544

Amino Acids

61.41

Weight (kDa)

7.66

Isoelectric Point (pI)

41.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 325 - 461 1.6e-22 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1214
AasI GACNNNNNNGTC 1 cut(s) 537
AccI GTMKAC 2 cut(s) 224, 362
AciI CCGC 3 cut(s) 486, 1256, 1614
AclI AACGTT 3 cut(s) 778, 879, 914
AclWI GGATC 4 cut(s) 1152, 1570, 1600, 1613
AcoI YGGCCR 2 cut(s) 784, 1334
AcsI RAATTY 3 cut(s) 135, 594, 622
AcuI CTGAAG 1 cut(s) 1194
AcvI CACGTG 1 cut(s) 1252
AdeI CACNNNGTG 1 cut(s) 1280
AfeI AGCGCT 1 cut(s) 436
AflIII ACRYGT 2 cut(s) 675, 1249
AjnI CCWGG 2 cut(s) 730, 745
AjuI GAANNNNNNNTTGG 2 cut(s) 880, 912
AleI CACNNNNGTG 1 cut(s) 674
Alw26I GTCTC 1 cut(s) 646
AlwI GGATC 4 cut(s) 1152, 1570, 1600, 1613
AlwNI CAGNNNCTG 2 cut(s) 1243, 1310
Ama87I CYCGRG 1 cut(s) 47
Aor51HI AGCGCT 1 cut(s) 436
AoxI GGCC 5 cut(s) 277, 546, 784, 907, 1334
ApeKI GCWGC 4 cut(s) 122, 581, 794, 1616
ApoI RAATTY 3 cut(s) 135, 594, 622
ArsI GACNNNNNNTTYG 2 cut(s) 681, 713
Asp700I GAANNNNTTC 1 cut(s) 779
AspLEI GCGC 1 cut(s) 437
AspS9I GGNCC 3 cut(s) 445, 664, 908
AsuHPI GGTGA 3 cut(s) 1384, 1480, 1499
AsuII TTCGAA 1 cut(s) 1004
AvaI CYCGRG 1 cut(s) 47
AvaII GGWCC 2 cut(s) 445, 664
BamHI GGATCC 1 cut(s) 1605
BanII GRGCYC 1 cut(s) 1228
BbrPI CACGTG 1 cut(s) 1252
BbsI GAAGAC 1 cut(s) 465
BbvI GCAGC 4 cut(s) 109, 568, 781, 1603
BciT130I CCWGG 2 cut(s) 732, 747
BclI TGATCA 1 cut(s) 516
BcoDI GTCTC 1 cut(s) 646
BfaI CTAG 6 cut(s) 281, 494, 605, 959, 998, 1422
BfoI RGCGCY 1 cut(s) 438
BglII AGATCT 1 cut(s) 54
BisI GCNGC 4 cut(s) 123, 582, 795, 1617
BlpI GCTNAGC 1 cut(s) 1065
BlsI GCNGC 4 cut(s) 124, 583, 796, 1618
Bme1390I CCNGG 2 cut(s) 732, 747
Bme18I GGWCC 2 cut(s) 445, 664
BmeT110I CYCGRG 1 cut(s) 47
BmgT120I GGNCC 3 cut(s) 445, 664, 908
BmiI GGNNCC 2 cut(s) 1227, 1607
BmrFI CCNGG 2 cut(s) 732, 747
BmrI ACTGGG 1 cut(s) 1426
BmsI GCATC 2 cut(s) 82, 1051
BmuI ACTGGG 1 cut(s) 1426
BpiI GAAGAC 1 cut(s) 465
BpmI CTGGAG 1 cut(s) 1335
Bpu1102I GCTNAGC 1 cut(s) 1065
Bpu14I TTCGAA 1 cut(s) 1004
BpuEI CTTGAG 3 cut(s) 527, 563, 1215
BsaAI YACGTR 2 cut(s) 1252, 1332
BsaBI GATNNNNATC 2 cut(s) 66, 1581
BsaJI CCNNGG 6 cut(s) 140, 448, 563, 599, 613, 745
BsaXI ACNNNNNCTCC 3 cut(s) 1254, 1284, 1603
Bse118I RCCGGY 1 cut(s) 1336
Bse1I ACTGG 4 cut(s) 27, 166, 1351, 1421
Bse3DI GCAATG 2 cut(s) 18, 76
Bse8I GATNNNNATC 2 cut(s) 66, 1581
BseBI CCWGG 2 cut(s) 732, 747
BseDI CCNNGG 6 cut(s) 140, 448, 563, 599, 613, 745
BseJI GATNNNNATC 2 cut(s) 66, 1581
BseMI GCAATG 2 cut(s) 18, 76
BseMII CTCAG 4 cut(s) 246, 759, 1032, 1079
BseNI ACTGG 4 cut(s) 27, 166, 1351, 1421
BseRI GAGGAG 3 cut(s) 823, 826, 1218
BseXI GCAGC 4 cut(s) 109, 568, 781, 1603
BseYI CCCAGC 1 cut(s) 1221
BsgI GTGCAG 1 cut(s) 1256
Bsh1285I CGRYCG 1 cut(s) 1260
BshFI GGCC 5 cut(s) 279, 548, 786, 909, 1336
BsiEI CGRYCG 1 cut(s) 1260
BsiHKCI CYCGRG 1 cut(s) 47
BsiSI CCGG 3 cut(s) 419, 1337, 1560
BsmAI GTCTC 1 cut(s) 646
BsmI GAATGC 1 cut(s) 989
BsnI GGCC 5 cut(s) 279, 548, 786, 909, 1336
BsoBI CYCGRG 1 cut(s) 47
Bsp119I TTCGAA 1 cut(s) 1004
Bsp1286I GDGCHC 1 cut(s) 1228
Bsp143I GATC 6 cut(s) 54, 516, 574, 1144, 1562, 1605
Bsp1720I GCTNAGC 1 cut(s) 1065
Bsp19I CCATGG 2 cut(s) 563, 613
BspACI CCGC 3 cut(s) 486, 1256, 1614
BspANI GGCC 5 cut(s) 279, 548, 786, 909, 1336
BspCNI CTCAG 4 cut(s) 245, 760, 1031, 1078
BspHI TCATGA 1 cut(s) 753
BspLI GGNNCC 2 cut(s) 1227, 1607
BspPI GGATC 4 cut(s) 1152, 1570, 1600, 1613
BspT104I TTCGAA 1 cut(s) 1004
BsrDI GCAATG 2 cut(s) 18, 76
BsrFI RCCGGY 1 cut(s) 1336
BsrI ACTGG 4 cut(s) 27, 166, 1351, 1421
BssAI RCCGGY 1 cut(s) 1336
BssECI CCNNGG 6 cut(s) 140, 448, 563, 599, 613, 745
BssMI GATC 6 cut(s) 54, 516, 574, 1144, 1562, 1605
BssT1I CCWWGG 5 cut(s) 140, 448, 563, 599, 613
Bst2UI CCWGG 2 cut(s) 732, 747
Bst4CI ACNGT 1 cut(s) 836
Bst6I CTCTTC 1 cut(s) 1439
BstAPI GCANNNNNTGC 1 cut(s) 1310
BstBAI YACGTR 2 cut(s) 1252, 1332
BstBI TTCGAA 1 cut(s) 1004
BstC8I GCNNGC 1 cut(s) 1338
BstDEI CTNAG 6 cut(s) 58, 126, 232, 768, 1018, 1065
BstDSI CCRYGG 2 cut(s) 563, 613
BstH2I RGCGCY 1 cut(s) 438
BstHHI GCGC 1 cut(s) 437
BstKTI GATC 6 cut(s) 57, 519, 577, 1147, 1565, 1608
BstMAI GTCTC 1 cut(s) 646
BstMBI GATC 6 cut(s) 54, 516, 574, 1144, 1562, 1605
BstMCI CGRYCG 1 cut(s) 1260
BstMWI GCNNNNNNNGC 1 cut(s) 1310
BstNI CCWGG 2 cut(s) 732, 747
BstSCI CCNGG 2 cut(s) 730, 745
BstV1I GCAGC 4 cut(s) 109, 568, 781, 1603
BstV2I GAAGAC 1 cut(s) 465
BstX2I RGATCY 2 cut(s) 54, 1605
BstXI CCANNNNNNTGG 1 cut(s) 746
BstYI RGATCY 2 cut(s) 54, 1605
BsuRI GGCC 5 cut(s) 279, 548, 786, 909, 1336
BtgI CCRYGG 2 cut(s) 563, 613
BtsI GCAGTG 2 cut(s) 1048, 1311
BtsIMutI CAGTG 2 cut(s) 1048, 1311
Cac8I GCNNGC 1 cut(s) 1338
CaiI CAGNNNCTG 2 cut(s) 1243, 1310
CciI TCATGA 1 cut(s) 753
CfoI GCGC 1 cut(s) 437
Cfr10I RCCGGY 1 cut(s) 1336
Cfr13I GGNCC 3 cut(s) 445, 664, 908
CseI GACGC 1 cut(s) 1303
DdeI CTNAG 6 cut(s) 58, 126, 232, 768, 1018, 1065
DpnI GATC 6 cut(s) 56, 518, 576, 1146, 1564, 1607
DpnII GATC 6 cut(s) 54, 516, 574, 1144, 1562, 1605
DraIII CACNNNGTG 1 cut(s) 1280
DrdI GACNNNNNNGTC 1 cut(s) 537
DseDI GACNNNNNNGTC 1 cut(s) 537
EaeI YGGCCR 2 cut(s) 784, 1334
Eam1104I CTCTTC 1 cut(s) 1439
EarI CTCTTC 1 cut(s) 1439
Eco130I CCWWGG 5 cut(s) 140, 448, 563, 599, 613
Eco24I GRGCYC 1 cut(s) 1228
Eco47I GGWCC 2 cut(s) 445, 664
Eco47III AGCGCT 1 cut(s) 436
Eco57I CTGAAG 1 cut(s) 1194
Eco72I CACGTG 1 cut(s) 1252
Eco88I CYCGRG 1 cut(s) 47
EcoRI GAATTC 2 cut(s) 135, 594
EcoRII CCWGG 2 cut(s) 730, 745
EcoT14I CCWWGG 5 cut(s) 140, 448, 563, 599, 613
EcoT38I GRGCYC 1 cut(s) 1228
ErhI CCWWGG 5 cut(s) 140, 448, 563, 599, 613
FauNDI CATATG 1 cut(s) 1115
FbaI TGATCA 1 cut(s) 516
FblI GTMKAC 2 cut(s) 224, 362
Fnu4HI GCNGC 4 cut(s) 123, 582, 795, 1617
FriOI GRGCYC 1 cut(s) 1228
Fsp4HI GCNGC 4 cut(s) 123, 582, 795, 1617
FspBI CTAG 6 cut(s) 281, 494, 605, 959, 998, 1422
GlaI GCGC 1 cut(s) 436
GluI GCNGC 4 cut(s) 123, 582, 795, 1617
GsaI CCCAGC 1 cut(s) 1225
GsuI CTGGAG 1 cut(s) 1335
HaeII RGCGCY 1 cut(s) 438
HaeIII GGCC 5 cut(s) 279, 548, 786, 909, 1336
HapII CCGG 3 cut(s) 419, 1337, 1560
HgaI GACGC 1 cut(s) 1303
HhaI GCGC 1 cut(s) 437
Hin6I GCGC 1 cut(s) 435
HinP1I GCGC 1 cut(s) 435
HincII GTYRAC 3 cut(s) 363, 832, 865
HindII GTYRAC 3 cut(s) 363, 832, 865
HindIII AAGCTT 2 cut(s) 894, 1095
HpaI GTTAAC 1 cut(s) 832
HpaII CCGG 3 cut(s) 419, 1337, 1560
HphI GGTGA 3 cut(s) 1384, 1480, 1499
Hpy166II GTNNAC 4 cut(s) 225, 363, 832, 865
Hpy188I TCNGA 7 cut(s) 235, 354, 682, 688, 769, 805, 1262
Hpy188III TCNNGA 7 cut(s) 327, 475, 542, 724, 754, 1148, 1244
Hpy8I GTNNAC 4 cut(s) 225, 363, 832, 865
Hpy99I CGWCG 1 cut(s) 1297
HpyAV CCTTC 9 cut(s) 241, 256, 416, 472, 1135, 1169, 1190, 1456, 1546
HpyCH4III ACNGT 1 cut(s) 836
HpyCH4IV ACGT 6 cut(s) 675, 778, 879, 914, 1251, 1331
HpyCH4V TGCA 3 cut(s) 294, 584, 1237
HpyF10VI GCNNNNNNNGC 1 cut(s) 1310
HpyF3I CTNAG 6 cut(s) 58, 126, 232, 768, 1018, 1065
HpySE526I ACGT 6 cut(s) 675, 778, 879, 914, 1251, 1331
HspAI GCGC 1 cut(s) 435
KroI GCCGGC 1 cut(s) 1336
KroNI GCCGGC 1 cut(s) 1338
Ksp22I TGATCA 1 cut(s) 516
KspAI GTTAAC 1 cut(s) 832
Kzo9I GATC 6 cut(s) 54, 516, 574, 1144, 1562, 1605
LmnI GCTCC 3 cut(s) 813, 1231, 1624
Lsp1109I GCAGC 4 cut(s) 109, 568, 781, 1603
LweI GCATC 2 cut(s) 82, 1051
MaeI CTAG 6 cut(s) 281, 494, 605, 959, 998, 1422
MaeII ACGT 6 cut(s) 675, 778, 879, 914, 1251, 1331
MaeIII GTNAC 3 cut(s) 381, 1270, 1372
MalI GATC 6 cut(s) 56, 518, 576, 1146, 1564, 1607
MboI GATC 6 cut(s) 54, 516, 574, 1144, 1562, 1605
MboII GAAGA 8 cut(s) 7, 160, 208, 470, 950, 1018, 1456, 1607
MfeI CAATTG 1 cut(s) 535
MflI RGATCY 2 cut(s) 54, 1605
MhlI GDGCHC 1 cut(s) 1228
MluCI AATT 9 cut(s) 135, 218, 535, 594, 622, 706, 1077, 1109, 1598
MlyI GAGTC 3 cut(s) 224, 332, 1369
MmeI TCCRAC 2 cut(s) 391, 1240
MroNI GCCGGC 1 cut(s) 1336
MroXI GAANNNNTTC 1 cut(s) 779
MseI TTAA 4 cut(s) 242, 345, 831, 1125
MslI CAYNNNNRTG 3 cut(s) 674, 978, 1118
MspA1I CMGCKG 1 cut(s) 1616
MspI CCGG 3 cut(s) 419, 1337, 1560
MspR9I CCNGG 2 cut(s) 732, 747
MunI CAATTG 1 cut(s) 535
Mva1269I GAATGC 1 cut(s) 989
MvaI CCWGG 2 cut(s) 732, 747
MwoI GCNNNNNNNGC 1 cut(s) 1310
NaeI GCCGGC 1 cut(s) 1338
NcoI CCATGG 2 cut(s) 563, 613
NdeI CATATG 1 cut(s) 1115
NdeII GATC 6 cut(s) 54, 516, 574, 1144, 1562, 1605
NgoMIV GCCGGC 1 cut(s) 1336
NlaIV GGNNCC 2 cut(s) 1227, 1607
NmuCI GTSAC 3 cut(s) 381, 1270, 1372
NspV TTCGAA 1 cut(s) 1004
OliI CACNNNNGTG 1 cut(s) 674
PaeR7I CTCGAG 1 cut(s) 47
PagI TCATGA 1 cut(s) 753
PcsI WCGNNNNNNNCGW 1 cut(s) 1337
PctI GAATGC 1 cut(s) 989
PdiI GCCGGC 1 cut(s) 1338
PdmI GAANNNNTTC 1 cut(s) 779
PfeI GAWTC 8 cut(s) 683, 727, 764, 800, 888, 1001, 1240, 1582
PfoI TCCNGGA 1 cut(s) 730
PkrI GCNGC 4 cut(s) 124, 583, 796, 1618
PleI GAGTC 3 cut(s) 224, 331, 1369
PmaCI CACGTG 1 cut(s) 1252
PmlI CACGTG 1 cut(s) 1252
PpsI GAGTC 3 cut(s) 224, 331, 1369
Ppu21I YACGTR 2 cut(s) 1252, 1332
PsiI TTATAA 1 cut(s) 1214
Psp1406I AACGTT 3 cut(s) 778, 879, 914
Psp6I CCWGG 2 cut(s) 730, 745
PspCI CACGTG 1 cut(s) 1252
PspFI CCCAGC 1 cut(s) 1221
PspGI CCWGG 2 cut(s) 730, 745
PspN4I GGNNCC 2 cut(s) 1227, 1607
PspPI GGNCC 3 cut(s) 445, 664, 908
PspXI VCTCGAGB 1 cut(s) 47
PstNI CAGNNNCTG 2 cut(s) 1243, 1310
PsuI RGATCY 2 cut(s) 54, 1605
RseI CAYNNNNRTG 3 cut(s) 674, 978, 1118
SalI GTCGAC 1 cut(s) 361
SaqAI TTAA 4 cut(s) 242, 345, 831, 1125
SatI GCNGC 4 cut(s) 123, 582, 795, 1617
Sau3AI GATC 6 cut(s) 54, 516, 574, 1144, 1562, 1605
Sau96I GGNCC 3 cut(s) 445, 664, 908
SchI GAGTC 3 cut(s) 224, 332, 1369
ScrFI CCNGG 2 cut(s) 732, 747
SduI GDGCHC 1 cut(s) 1228
SfaNI GCATC 2 cut(s) 82, 1051
Sfr274I CTCGAG 1 cut(s) 47
SfuI TTCGAA 1 cut(s) 1004
SinI GGWCC 2 cut(s) 445, 664
SlaI CTCGAG 1 cut(s) 47
SmiMI CAYNNNNRTG 3 cut(s) 674, 978, 1118
SmlI CTYRAG 4 cut(s) 47, 506, 542, 1230
SmoI CTYRAG 4 cut(s) 47, 506, 542, 1230
Sse9I AATT 9 cut(s) 135, 218, 535, 594, 622, 706, 1077, 1109, 1598
SsiI CCGC 3 cut(s) 486, 1256, 1614
SspMI CTAG 6 cut(s) 281, 494, 605, 959, 998, 1422
StyD4I CCNGG 2 cut(s) 730, 745
StyI CCWWGG 5 cut(s) 140, 448, 563, 599, 613
TaaI ACNGT 1 cut(s) 836
TaiI ACGT 6 cut(s) 678, 781, 882, 917, 1254, 1334
TaqI TCGA 4 cut(s) 48, 362, 1004, 1292
TasI AATT 9 cut(s) 135, 218, 535, 594, 622, 706, 1077, 1109, 1598
TfiI GAWTC 8 cut(s) 683, 727, 764, 800, 888, 1001, 1240, 1582
Tru1I TTAA 4 cut(s) 242, 345, 831, 1125
Tru9I TTAA 4 cut(s) 242, 345, 831, 1125
TscAI CASTG 2 cut(s) 1048, 1311
TseFI GTSAC 3 cut(s) 381, 1270, 1372
TseI GCWGC 4 cut(s) 122, 581, 794, 1616
Tsp45I GTSAC 3 cut(s) 381, 1270, 1372
TspRI CASTG 2 cut(s) 1048, 1311
VpaK11BI GGWCC 2 cut(s) 445, 664
XapI RAATTY 3 cut(s) 135, 594, 622
XhoI CTCGAG 1 cut(s) 47
XmiI GTMKAC 2 cut(s) 224, 362
XmnI GAANNNNTTC 1 cut(s) 779
XspI CTAG 6 cut(s) 281, 494, 605, 959, 998, 1422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.