Rmu_sc0001598.1_g000016

UDP-glucose flavonoid 3-O-glucosyltransferase 7-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001598.1
OG0000135
Physical Location & Seq
Forward (+)
74820 .. 76190
1371 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001598.1_g000016.1.cds

Sequence Viewer

Length: 1371 bp
atgggtcaaggccacactatacccctcataaacatatccaagctatttgcttcacatggtgtaagaaccaccataataaccacaaccctcaatgcaccactattttctaaaccaatccaaagttctggttttgatattgaacttcttgtcatcaaattcccatgtattgaggttggattgccagagggaattgaaaggccaaatttagccacaaccccggaaatgaaggagaagttcttcaaagctaccactctgcttcaaccacaaattgacaaaattctggaccaacatcgacctcactgccttgttgcagatacttgctttgcttgggctactgatgttgctgccaagttcgggattccgaggctgatctttcatggaactggttttttcccaatgtgtgcttcactaaacctgttattgtatcaaccgcacaagaaggtttcatctgattcagaatcttttgtaattcctaatttaccagataagatcaagatgacaagaaaccaattaccagttttcttcaatcaaaatgtcgagacagaattcaccaaattggtcaaagcatccatagagagtgaaaaaaagagctatggtgttattgttaatagcttctatgaactcgaatcaaattatgcagatcattacaggaatgtgtttggaaggaaagcgtggcatattggcccggtttccttgttcaacaaggcagcagttgatgaagaaaatggctgcttccattggctaaattttaagaaacccagttcagtcatttacatatgttttgggagcatgaccaatttcagtgattctcaactcctggaaattgcagtagggcttgaggctagtgggcaggagttcatttgggttgtgaagaaagaaaagaatgaaaaagaagagtggttgccaaaagggtttgagcagagaatggaaggtaagggagtgattataagaggttgggctccccaagtagcgattcttgagcacgaagctattggagggtttgtgactcattgtggatggaactctatccttgaagcagtgtcagctggggtgccaatgatcacttggccggtgtctgccgagcagttttacaatgagaagttggtgactcagatacttgggattggggttgttgttggtgctaaaaaatggtcgacatttgaggagaatagtgtgaagagggaagccattgtgcaaagtgaagccatagaaaaggctttgactagaatcatggtgggtggtgaagctgaaaaaatcagaagcaaagccaaagcgcttggtgagatggcaacaagggctgttcaagtaggtggttcatctttctcggatttgaatgctctaattgaagatttgaggtccctcagcgcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

456

Amino Acids

50.73

Weight (kDa)

6.62

Isoelectric Point (pI)

38.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 947
AccB1I GGYRCC 1 cut(s) 1051
AccI GTMKAC 1 cut(s) 1154
AciI CCGC 1 cut(s) 431
AcoI YGGCCR 1 cut(s) 1067
AcsI RAATTY 5 cut(s) 155, 202, 276, 545, 745
AdeI CACNNNGTG 1 cut(s) 59
AfeI AGCGCT 2 cut(s) 1275, 1366
AfiI CCNNNNNNNGG 1 cut(s) 354
AjnI CCWGG 1 cut(s) 816
AjuI GAANNNNNNNTTGG 6 cut(s) 106, 138, 388, 420, 957, 989
AluBI AGCT 7 cut(s) 43, 245, 591, 612, 989, 1046, 1247
AluI AGCT 7 cut(s) 43, 245, 591, 612, 989, 1046, 1247
Alw21I GWGCWC 1 cut(s) 984
Alw26I GTCTC 1 cut(s) 533
Aor51HI AGCGCT 2 cut(s) 1275, 1366
AoxI GGCC 4 cut(s) 10, 197, 682, 1067
ApeKI GCWGC 3 cut(s) 344, 707, 729
ApoI RAATTY 5 cut(s) 155, 202, 276, 545, 745
Asp700I GAANNNNTTC 1 cut(s) 236
AspLEI GCGC 2 cut(s) 1276, 1367
AspS9I GGNCC 3 cut(s) 283, 683, 1356
AsuC2I CCSGG 2 cut(s) 218, 686
AsuHPI GGTGA 4 cut(s) 541, 1117, 1253, 1292
AvaII GGWCC 2 cut(s) 283, 1356
BanI GGYRCC 1 cut(s) 1051
BanII GRGCYC 1 cut(s) 961
Bbv12I GWGCWC 1 cut(s) 984
BbvCI CCTCAGC 1 cut(s) 1361
BbvI GCAGC 3 cut(s) 331, 716, 719
BccI CCATC 2 cut(s) 1011, 1279
BcgI CGANNNNNNTGC 2 cut(s) 282, 316
BciT130I CCWGG 1 cut(s) 818
BclI TGATCA 1 cut(s) 1059
BcnI CCSGG 2 cut(s) 218, 686
BcoDI GTCTC 1 cut(s) 533
BfaI CTAG 2 cut(s) 843, 1224
BfoI RGCGCY 2 cut(s) 1277, 1368
BisI GCNGC 3 cut(s) 345, 708, 730
BlsI GCNGC 3 cut(s) 346, 709, 731
Bme1390I CCNGG 3 cut(s) 218, 686, 818
Bme18I GGWCC 2 cut(s) 283, 1356
BmgT120I GGNCC 3 cut(s) 283, 683, 1356
BmiI GGNNCC 3 cut(s) 960, 1053, 1358
BmrFI CCNGG 3 cut(s) 218, 686, 818
BmrI ACTGGG 1 cut(s) 753
BmsI GCATC 1 cut(s) 575
BmuI ACTGGG 1 cut(s) 753
Bpu10I CCTNAGC 1 cut(s) 1361
BpuEI CTTGAG 2 cut(s) 857, 998
BpuMI CCSGG 2 cut(s) 218, 686
BsaJI CCNNGG 2 cut(s) 216, 362
BsaXI ACNNNNNCTCC 2 cut(s) 987, 1017
Bsc4I CCNNNNNNNGG 1 cut(s) 354
Bse118I RCCGGY 1 cut(s) 1069
Bse1I ACTGG 3 cut(s) 388, 515, 759
BseBI CCWGG 1 cut(s) 818
BseDI CCNNGG 2 cut(s) 216, 362
BseGI GGATG 2 cut(s) 566, 1022
BseLI CCNNNNNNNGG 1 cut(s) 354
BseMII CTCAG 1 cut(s) 1124
BseNI ACTGG 3 cut(s) 388, 515, 759
BseRI GAGGAG 1 cut(s) 1178
BseXI GCAGC 3 cut(s) 331, 716, 719
BseYI CCCAGC 1 cut(s) 1046
BshFI GGCC 4 cut(s) 12, 199, 684, 1069
BshNI GGYRCC 1 cut(s) 1051
BsiHKAI GWGCWC 1 cut(s) 984
BsiSI CCGG 3 cut(s) 218, 686, 1070
BslFI GGGAC 1 cut(s) 1342
BslI CCNNNNNNNGG 1 cut(s) 354
BsmAI GTCTC 1 cut(s) 533
BsmFI GGGAC 1 cut(s) 1342
BsmI GAATGC 1 cut(s) 1339
BsnI GGCC 4 cut(s) 12, 199, 684, 1069
Bsp1286I GDGCHC 2 cut(s) 961, 984
Bsp143I GATC 4 cut(s) 369, 489, 640, 1059
BspACI CCGC 1 cut(s) 431
BspANI GGCC 4 cut(s) 12, 199, 684, 1069
BspCNI CTCAG 1 cut(s) 1123
BspLI GGNNCC 3 cut(s) 960, 1053, 1358
BspT107I GGYRCC 1 cut(s) 1051
BsrFI RCCGGY 1 cut(s) 1069
BsrI ACTGG 3 cut(s) 388, 515, 759
BssAI RCCGGY 1 cut(s) 1069
BssECI CCNNGG 2 cut(s) 216, 362
BssMI GATC 4 cut(s) 369, 489, 640, 1059
Bst2UI CCWGG 1 cut(s) 818
Bst6I CTCTTC 2 cut(s) 888, 1172
BstDEI CTNAG 2 cut(s) 1110, 1361
BstF5I GGATG 2 cut(s) 566, 1022
BstH2I RGCGCY 2 cut(s) 1277, 1368
BstHHI GCGC 2 cut(s) 1276, 1367
BstKTI GATC 4 cut(s) 372, 492, 643, 1062
BstMAI GTCTC 1 cut(s) 533
BstMBI GATC 4 cut(s) 369, 489, 640, 1059
BstMWI GCNNNNNNNGC 2 cut(s) 1043, 1295
BstNI CCWGG 1 cut(s) 818
BstSCI CCNGG 3 cut(s) 216, 684, 816
BstV1I GCAGC 3 cut(s) 331, 716, 719
BstXI CCANNNNNNTGG 1 cut(s) 125
BsuRI GGCC 4 cut(s) 12, 199, 684, 1069
BtsCI GGATG 2 cut(s) 566, 1022
BtsI GCAGTG 2 cut(s) 298, 1044
BtsIMutI CAGTG 3 cut(s) 298, 808, 1044
CfoI GCGC 2 cut(s) 1276, 1367
Cfr10I RCCGGY 1 cut(s) 1069
Cfr13I GGNCC 3 cut(s) 283, 683, 1356
CviAII CATG 5 cut(s) 56, 162, 377, 790, 1231
DdeI CTNAG 2 cut(s) 1110, 1361
DpnI GATC 4 cut(s) 371, 491, 642, 1061
DpnII GATC 4 cut(s) 369, 489, 640, 1059
DraIII CACNNNGTG 1 cut(s) 59
EaeI YGGCCR 1 cut(s) 1067
Eam1104I CTCTTC 2 cut(s) 888, 1172
EarI CTCTTC 2 cut(s) 888, 1172
Eco24I GRGCYC 1 cut(s) 961
Eco47I GGWCC 2 cut(s) 283, 1356
Eco47III AGCGCT 2 cut(s) 1275, 1366
EcoO109I RGGNCCY 1 cut(s) 1356
EcoRI GAATTC 1 cut(s) 545
EcoRII CCWGG 1 cut(s) 816
EcoT38I GRGCYC 1 cut(s) 961
FaeI CATG 5 cut(s) 59, 165, 380, 793, 1234
FaqI GGGAC 1 cut(s) 1342
FatI CATG 5 cut(s) 55, 161, 376, 789, 1230
FauNDI CATATG 1 cut(s) 776
FbaI TGATCA 1 cut(s) 1059
FblI GTMKAC 1 cut(s) 1154
Fnu4HI GCNGC 3 cut(s) 345, 708, 730
FokI GGATG 2 cut(s) 553, 1029
FriOI GRGCYC 1 cut(s) 961
Fsp4HI GCNGC 3 cut(s) 345, 708, 730
FspBI CTAG 2 cut(s) 843, 1224
GlaI GCGC 2 cut(s) 1275, 1366
GluI GCNGC 3 cut(s) 345, 708, 730
GsaI CCCAGC 1 cut(s) 1050
HaeII RGCGCY 2 cut(s) 1277, 1368
HaeIII GGCC 4 cut(s) 12, 199, 684, 1069
HapII CCGG 3 cut(s) 218, 686, 1070
HhaI GCGC 2 cut(s) 1276, 1367
Hin1II CATG 5 cut(s) 59, 165, 380, 793, 1234
Hin6I GCGC 2 cut(s) 1274, 1365
HinP1I GCGC 2 cut(s) 1274, 1365
HincII GTYRAC 1 cut(s) 1155
HindII GTYRAC 1 cut(s) 1155
HinfI GANTC 9 cut(s) 358, 452, 458, 626, 806, 973, 1006, 1108, 1227
HpaII CCGG 3 cut(s) 218, 686, 1070
HphI GGTGA 4 cut(s) 541, 1117, 1253, 1292
Hpy166II GTNNAC 1 cut(s) 1155
Hpy188I TCNGA 6 cut(s) 363, 451, 457, 1113, 1259, 1327
Hpy188III TCNNGA 5 cut(s) 281, 355, 493, 538, 977
Hpy8I GTNNAC 1 cut(s) 1155
HpyAV CCTTC 4 cut(s) 220, 433, 657, 923
HpyCH4V TGCA 5 cut(s) 95, 311, 638, 827, 1195
HpyF10VI GCNNNNNNNGC 2 cut(s) 1043, 1295
HpyF3I CTNAG 2 cut(s) 1110, 1361
Hsp92II CATG 5 cut(s) 59, 165, 380, 793, 1234
HspAI GCGC 2 cut(s) 1274, 1365
Ksp22I TGATCA 1 cut(s) 1059
Kzo9I GATC 4 cut(s) 369, 489, 640, 1059
LmnI GCTCC 2 cut(s) 786, 964
Lsp1109I GCAGC 3 cut(s) 331, 716, 719
LweI GCATC 1 cut(s) 575
MaeI CTAG 2 cut(s) 843, 1224
MaeIII GTNAC 2 cut(s) 1003, 1105
MalI GATC 4 cut(s) 371, 491, 642, 1061
MboI GATC 4 cut(s) 369, 489, 640, 1059
MboII GAAGA 7 cut(s) 229, 514, 731, 883, 905, 1189, 1358
MhlI GDGCHC 2 cut(s) 961, 984
MlyI GAGTC 2 cut(s) 1000, 1102
MmeI TCCRAC 1 cut(s) 154
MroXI GAANNNNTTC 1 cut(s) 236
MseI TTAA 2 cut(s) 606, 750
MspA1I CMGCKG 1 cut(s) 1046
MspI CCGG 3 cut(s) 218, 686, 1070
MspR9I CCNGG 3 cut(s) 218, 686, 818
Mva1269I GAATGC 1 cut(s) 1339
MvaI CCWGG 1 cut(s) 818
MwoI GCNNNNNNNGC 2 cut(s) 1043, 1295
NciI CCSGG 2 cut(s) 218, 686
NdeI CATATG 1 cut(s) 776
NdeII GATC 4 cut(s) 369, 489, 640, 1059
NlaIII CATG 5 cut(s) 59, 165, 380, 793, 1234
NlaIV GGNNCC 3 cut(s) 960, 1053, 1358
NmeAIII GCCGAG 1 cut(s) 1105
NmuCI GTSAC 2 cut(s) 1003, 1105
PctI GAATGC 1 cut(s) 1339
PdmI GAANNNNTTC 1 cut(s) 236
PfeI GAWTC 7 cut(s) 358, 452, 458, 626, 806, 973, 1227
PfoI TCCNGGA 1 cut(s) 816
PkrI GCNGC 3 cut(s) 346, 709, 731
PleI GAGTC 2 cut(s) 1000, 1102
PpsI GAGTC 2 cut(s) 1000, 1102
PpuMI RGGWCCY 1 cut(s) 1356
PsiI TTATAA 1 cut(s) 947
Psp5II RGGWCCY 1 cut(s) 1356
Psp6I CCWGG 1 cut(s) 816
PspFI CCCAGC 1 cut(s) 1046
PspGI CCWGG 1 cut(s) 816
PspN4I GGNNCC 3 cut(s) 960, 1053, 1358
PspPI GGNCC 3 cut(s) 283, 683, 1356
PspPPI RGGWCCY 1 cut(s) 1356
PvuII CAGCTG 1 cut(s) 1046
SalI GTCGAC 1 cut(s) 1153
SaqAI TTAA 2 cut(s) 606, 750
SatI GCNGC 3 cut(s) 345, 708, 730
Sau3AI GATC 4 cut(s) 369, 489, 640, 1059
Sau96I GGNCC 3 cut(s) 283, 683, 1356
SchI GAGTC 2 cut(s) 1000, 1102
ScrFI CCNGG 3 cut(s) 218, 686, 818
SduI GDGCHC 2 cut(s) 961, 984
SfaNI GCATC 1 cut(s) 575
SinI GGWCC 2 cut(s) 283, 1356
SmlI CTYRAG 2 cut(s) 836, 977
SmoI CTYRAG 2 cut(s) 836, 977
SsiI CCGC 1 cut(s) 431
SspMI CTAG 2 cut(s) 843, 1224
StyD4I CCNGG 3 cut(s) 216, 684, 816
TaqI TCGA 4 cut(s) 292, 537, 624, 1154
TfiI GAWTC 7 cut(s) 358, 452, 458, 626, 806, 973, 1227
Tru1I TTAA 2 cut(s) 606, 750
Tru9I TTAA 2 cut(s) 606, 750
TscAI CASTG 3 cut(s) 305, 808, 1044
TseFI GTSAC 2 cut(s) 1003, 1105
TseI GCWGC 3 cut(s) 344, 707, 729
Tsp45I GTSAC 2 cut(s) 1003, 1105
TspDTI ATGAA 8 cut(s) 239, 365, 435, 633, 732, 847, 900, 1305
TspRI CASTG 3 cut(s) 305, 808, 1044
VpaK11BI GGWCC 2 cut(s) 283, 1356
XapI RAATTY 5 cut(s) 155, 202, 276, 545, 745
XcmI CCANNNNNNNNNTGG 1 cut(s) 1062
XmiI GTMKAC 1 cut(s) 1154
XmnI GAANNNNTTC 1 cut(s) 236
XspI CTAG 2 cut(s) 843, 1224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.