RLG00000014793

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
57586820 .. 57587798
979 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014793

Sequence Viewer

Length: 867 bp
ATGAACGTTTCATCTGATTCAGAATCTTTTGTTATTCCTAATCTCCTACATGAGATCAAGAGCACAAGAAACCAAGTACCAGCTTTTCTTAATGTGGATTCCAAAACAGAACTCTTCAAGCTGGTCAAAGCATCTATGGAGGTTGACGAAAGGAGCTTTGGGATTCTTGTTAACAGCTTCTACGAACTTGAACCAGAATATGTAGATCACTATAGGAAGGTGTTTGGGAGGAAGTCATGGCATATCGGCTCAGTTTCTTTATGCAACAAGGCAGAAGAAGATAAATCAGCGAGGGGAGAGGAAGGCTCTGCTGATGGAGTACATGAATGCTTTGATTTGCTTAATACTAAGGAACCCAATTCGGTTGTTTATATCTGTTTTGGAAGCCTTACTAATTTCAGTGATGCTCAGCTTGTAGAAATTGCCTTGGCTCTTGAGTCTTCTCATCAGCAATTCATTTGGGTTGTCAGGAAAGAAAAGAATGATAAAGGAGAGTGGTTGCCTGATGAAGGATTTGAGCAGAGGTTAGAAGATAAAGGACTGATAATAAGAGGCTGGGCTCCCCAACTCCCAACTAAGCACTTCTACAATGGGAAGTTGATGACTAAGTTGCTTGGGATTGAGGTTGCTGTTGGGACTGAAAAGTGGGATACATTTGAGGATGATAGTCTGAAGAGCGAAGCTAGTGTGAAGATGGAGGCCATAGAGAAGGCTGTGATTGAAATCATGGTGGGTGATGAAGCAGAGGAAATGAGAAGCAGAGTTAAAGAGCTTGGAGAGATAGGAAGCAAGGCTGTTGAAGAAGGCGGTTCATCGTTCTCCGATTTAACTGCTCTTATTGAAGAGTTGAGGTTCCTTGGGACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

289

Amino Acids

32.43

Weight (kDa)

4.78

Isoelectric Point (pI)

42.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 807
AclI AACGTT 1 cut(s) 6
AcuI CTGAAG 1 cut(s) 692
AfaI GTAC 2 cut(s) 78, 321
AfiI CCNNNNNNNGG 1 cut(s) 509
AgsI TTSAA 5 cut(s) 118, 191, 722, 800, 842
AjuI GAANNNNNNNTTGG 2 cut(s) 141, 173
AluBI AGCT 7 cut(s) 83, 121, 156, 177, 412, 683, 772
AluI AGCT 7 cut(s) 83, 121, 156, 177, 412, 683, 772
Alw21I GWGCWC 1 cut(s) 65
AoxI GGCC 1 cut(s) 699
AspS9I GGNCC 1 cut(s) 861
AsuHPI GGTGA 1 cut(s) 746
AvaII GGWCC 1 cut(s) 861
BanII GRGCYC 1 cut(s) 562
BbsI GAAGAC 1 cut(s) 432
Bbv12I GWGCWC 1 cut(s) 65
BccI CCATC 2 cut(s) 308, 688
BcgI CGANNNNNNTGC 2 cut(s) 812, 846
BciVI GTATCC 1 cut(s) 643
BfaI CTAG 1 cut(s) 684
BfmI CTRYAG 1 cut(s) 211
BfuI GTATCC 1 cut(s) 643
BlpI GCTNAGC 1 cut(s) 408
Bme18I GGWCC 1 cut(s) 861
BmgT120I GGNCC 1 cut(s) 861
BmiI GGNNCC 4 cut(s) 354, 561, 854, 862
BmsI GCATC 2 cut(s) 140, 394
BpiI GAAGAC 1 cut(s) 432
BplI GAGNNNNNCTC 2 cut(s) 290, 322
Bpu1102I GCTNAGC 1 cut(s) 408
BpuEI CTTGAG 1 cut(s) 455
BsaBI GATNNNNATC 1 cut(s) 722
BsaJI CCNNGG 2 cut(s) 426, 856
Bsc4I CCNNNNNNNGG 1 cut(s) 509
Bse8I GATNNNNATC 1 cut(s) 722
BseDI CCNNGG 2 cut(s) 426, 856
BseGI GGATG 1 cut(s) 667
BseJI GATNNNNATC 1 cut(s) 722
BseLI CCNNNNNNNGG 1 cut(s) 509
BseMII CTCAG 2 cut(s) 264, 422
BseYI CCCAGC 1 cut(s) 555
BshFI GGCC 1 cut(s) 701
BsiHKAI GWGCWC 1 cut(s) 65
BslFI GGGAC 1 cut(s) 649
BslI CCNNNNNNNGG 1 cut(s) 509
BsmFI GGGAC 1 cut(s) 649
BsmI GAATGC 1 cut(s) 332
BsnI GGCC 1 cut(s) 701
Bsp1286I GDGCHC 2 cut(s) 65, 562
Bsp143I GATC 2 cut(s) 54, 205
Bsp1720I GCTNAGC 1 cut(s) 408
BspACI CCGC 1 cut(s) 807
BspANI GGCC 1 cut(s) 701
BspCNI CTCAG 2 cut(s) 263, 421
BspLI GGNNCC 4 cut(s) 354, 561, 854, 862
BspQI GCTCTTC 1 cut(s) 668
BssECI CCNNGG 2 cut(s) 426, 856
BssMI GATC 2 cut(s) 54, 205
BssT1I CCWWGG 2 cut(s) 426, 856
Bst6I CTCTTC 3 cut(s) 119, 668, 837
BstDEI CTNAG 5 cut(s) 250, 348, 408, 576, 606
BstENI CCTNNNNNAGG 1 cut(s) 507
BstF5I GGATG 1 cut(s) 667
BstKTI GATC 2 cut(s) 57, 208
BstMBI GATC 2 cut(s) 54, 205
BstSFI CTRYAG 1 cut(s) 211
BstV2I GAAGAC 1 cut(s) 432
BsuI GTATCC 1 cut(s) 643
BsuRI GGCC 1 cut(s) 701
BtsCI GGATG 1 cut(s) 667
BtsIMutI CAGTG 1 cut(s) 406
Cfr13I GGNCC 1 cut(s) 861
Csp6I GTAC 2 cut(s) 77, 320
CviAII CATG 4 cut(s) 50, 237, 323, 727
CviQI GTAC 2 cut(s) 77, 320
DdeI CTNAG 5 cut(s) 250, 348, 408, 576, 606
DpnI GATC 2 cut(s) 56, 207
DpnII GATC 2 cut(s) 54, 205
Eam1104I CTCTTC 3 cut(s) 119, 668, 837
EarI CTCTTC 3 cut(s) 119, 668, 837
Eco130I CCWWGG 2 cut(s) 426, 856
Eco24I GRGCYC 1 cut(s) 562
Eco47I GGWCC 1 cut(s) 861
Eco57I CTGAAG 1 cut(s) 692
EcoNI CCTNNNNNAGG 1 cut(s) 507
EcoO109I RGGNCCY 1 cut(s) 861
EcoT14I CCWWGG 2 cut(s) 426, 856
EcoT38I GRGCYC 1 cut(s) 562
ErhI CCWWGG 2 cut(s) 426, 856
FaeI CATG 4 cut(s) 53, 240, 326, 730
FaqI GGGAC 1 cut(s) 649
FatI CATG 4 cut(s) 49, 236, 322, 726
FokI GGATG 1 cut(s) 674
FriOI GRGCYC 1 cut(s) 562
FspBI CTAG 1 cut(s) 684
GsaI CCCAGC 1 cut(s) 559
HaeIII GGCC 1 cut(s) 701
Hin1II CATG 4 cut(s) 53, 240, 326, 730
HincII GTYRAC 2 cut(s) 145, 172
HindII GTYRAC 2 cut(s) 145, 172
HinfI GANTC 5 cut(s) 17, 23, 98, 163, 437
HpaI GTTAAC 1 cut(s) 172
HphI GGTGA 1 cut(s) 746
Hpy166II GTNNAC 2 cut(s) 145, 172
Hpy188I TCNGA 4 cut(s) 16, 22, 672, 823
Hpy188III TCNNGA 3 cut(s) 58, 434, 469
Hpy8I GTNNAC 2 cut(s) 145, 172
HpyAV CCTTC 5 cut(s) 211, 296, 503, 703, 797
HpyCH4IV ACGT 1 cut(s) 6
HpyCH4V TGCA 1 cut(s) 264
HpyF3I CTNAG 5 cut(s) 250, 348, 408, 576, 606
HpySE526I ACGT 1 cut(s) 6
Hsp92II CATG 4 cut(s) 53, 240, 326, 730
KspAI GTTAAC 1 cut(s) 172
Kzo9I GATC 2 cut(s) 54, 205
LguI GCTCTTC 1 cut(s) 668
LmnI GCTCC 2 cut(s) 153, 565
LpnPI CCDG 6 cut(s) 93, 107, 207, 454, 516, 541
LweI GCATC 2 cut(s) 140, 394
MaeI CTAG 1 cut(s) 684
MaeII ACGT 1 cut(s) 6
MalI GATC 2 cut(s) 56, 207
MboI GATC 2 cut(s) 54, 205
MboII GAAGA 9 cut(s) 106, 287, 290, 432, 542, 685, 703, 812, 854
MhlI GDGCHC 2 cut(s) 65, 562
MluCI AATT 4 cut(s) 358, 394, 420, 452
MlyI GAGTC 1 cut(s) 446
MseI TTAA 5 cut(s) 90, 171, 342, 765, 827
Mva1269I GAATGC 1 cut(s) 332
NdeII GATC 2 cut(s) 54, 205
NlaIII CATG 4 cut(s) 53, 240, 326, 730
NlaIV GGNNCC 4 cut(s) 354, 561, 854, 862
PciSI GCTCTTC 1 cut(s) 668
PctI GAATGC 1 cut(s) 332
PfeI GAWTC 4 cut(s) 17, 23, 98, 163
PleI GAGTC 1 cut(s) 445
PpsI GAGTC 1 cut(s) 445
PpuMI RGGWCCY 1 cut(s) 861
Psp1406I AACGTT 1 cut(s) 6
Psp5II RGGWCCY 1 cut(s) 861
PspFI CCCAGC 1 cut(s) 555
PspN4I GGNNCC 4 cut(s) 354, 561, 854, 862
PspPI GGNCC 1 cut(s) 861
PspPPI RGGWCCY 1 cut(s) 861
RsaI GTAC 2 cut(s) 78, 321
RsaNI GTAC 2 cut(s) 77, 320
SapI GCTCTTC 1 cut(s) 668
SaqAI TTAA 5 cut(s) 90, 171, 342, 765, 827
Sau3AI GATC 2 cut(s) 54, 205
Sau96I GGNCC 1 cut(s) 861
SchI GAGTC 1 cut(s) 446
SduI GDGCHC 2 cut(s) 65, 562
SfaNI GCATC 2 cut(s) 140, 394
SfcI CTRYAG 1 cut(s) 211
SinI GGWCC 1 cut(s) 861
SmlI CTYRAG 1 cut(s) 434
SmoI CTYRAG 1 cut(s) 434
Sse9I AATT 4 cut(s) 358, 394, 420, 452
SsiI CCGC 1 cut(s) 807
SspMI CTAG 1 cut(s) 684
StyI CCWWGG 2 cut(s) 426, 856
TaiI ACGT 1 cut(s) 9
TasI AATT 4 cut(s) 358, 394, 420, 452
TatI WGTACW 1 cut(s) 319
TfiI GAWTC 4 cut(s) 17, 23, 98, 163
Tru1I TTAA 5 cut(s) 90, 171, 342, 765, 827
Tru9I TTAA 5 cut(s) 90, 171, 342, 765, 827
TscAI CASTG 1 cut(s) 406
TspDTI ATGAA 6 cut(s) 17, 339, 445, 522, 753, 801
TspRI CASTG 1 cut(s) 406
VpaK11BI GGWCC 1 cut(s) 861
XagI CCTNNNNNAGG 1 cut(s) 507
XspI CTAG 1 cut(s) 684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.