RchiOBHm_Chr6g0257761

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000135
Physical Location & Seq
Reverse (-)
13104837 .. 13106285
1449 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23117

Sequence Viewer

Length: 1449 bp
ATGGAAACCAAAACTGATCAGCAGCTTCACATTTTCTTCCTTCCCTACATGGCTCAAGGTCACACTTTACCCCTTATAGACATAGCCAAACTATTTGCTTCACGTGGTGTAAAATCCACCTTAATAACCACCCCTGTCAATGCACCACTTTTCTCCAAAGCAATCCAAACTAGCAAAAGTTTGGGTTTTAAAATTGAACTTCTTGTCATCAAATTCCCATCAACTGAAGTCGGGTTGCCTGAAGGAATTGAAAGGACAAACTTGCGTAAAAACCAAGAGCAGGTGGAAAAGTACTTCAAAGCCATCATTCTGTTTCAGCAACAGGTTGAGCCGATTTTAGACCAACATCGTCCTCACTGTCTTGTTGCAGACGCTATGTTTCCTTGGGCTACAGATGTTGCTGCCAAGTTTGGGATTCCAAGGATCATCTTTCATGGAGCTGGTTTTTTTCCCTTGTGTGCTTCAACTAGTGTGATGCGGTACAAACCTCAGACGGCGGTTTCATCTGATTCAGAATCTTTTGTTATTCCTGGTCTTCCAGATGAGATCAAGATGACAAAAAACAAACTAGCTCCTTTTCTTATTCTAGAGGGTGAGTCAGAACTCATCAAATTGGTCAAAGCATCCATAGAGGCTGATGAAACAAGCTATGGGATTATAGTTAACAGCTTCTATGAACTTGAACCAGATTATGCAGATCATTATAGGAAGGTGTTTGGCAGGAAAGCATGGCATATCGGCCCTGCTTCTTTATGCGAGACAGAAAAAGATAAAGTAGAGAGGGGAAGGGAAGGCTCGGTTGATGAAGTACATGACTGCTTGAACTGGCTTAATTCTAAGAAACCCAATTCAGTTGTTTATATATGTTTTGGAAGCCTCACCAATTTCAGTGATTGTCAGCTCTTAGAAATCGCCTTGGCTCTTGAGGCTTCTCGACAGCAATTCATTTGGGTTGTGAAGAAAGAAAAGAATGATAAAGAAGAGTGGTTGCCCGAAGGATTTGAGCAGAGAGTGGAGGGAAAGGGACTGATTATAAGAGGTTGGGCTCCCCAACTACTGATTCTTCAACATGAAGCAGTTGGGGCCTTTGTCACTCATTGTGGGTGGAACTCAATCCTTGAAGGGGTGTCTTCTGGGGTTCCAATGATCACCTGGCCAGTGTCTGCAGACCAGTTTTTCAATGAGAAGTTGGTGACTCAGATACTTGGCATTGGGATTGCCATTGGTGCTCAAAAGTGGGAGGATGATAGTGTGCAGAGAGAAGCCAATGTGAAGAGGGAGGCTATAGAGAAGGCTGTGACTGAATTCATGGTCGGTCATGAAAAAGAGAAAATGAGGAGCAAAGTTCTTGAGCTCAGAGAGCTCGCAAGGAGGGCAGTTGAAGATGGTGGTTCATCGTTCTCTGATTTAACTGCTCTAATTGAAAAGTTGAAGTCTCTCGGGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

482

Amino Acids

54.1

Weight (kDa)

5.87

Isoelectric Point (pI)

36.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 274 - 400 1.2e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1034
AarI CACCTGC 1 cut(s) 271
Acc36I ACCTGC 1 cut(s) 271
AciI CCGC 2 cut(s) 478, 497
AclWI GGATC 1 cut(s) 431
AcoI YGGCCR 1 cut(s) 1154
AcsI RAATTY 2 cut(s) 212, 1304
AcuI CTGAAG 2 cut(s) 246, 261
AcvI CACGTG 1 cut(s) 104
AdeI CACNNNGTG 1 cut(s) 107
AfaI GTAC 3 cut(s) 293, 482, 810
AfiI CCNNNNNNNGG 3 cut(s) 280, 411, 1123
AhlI ACTAGT 1 cut(s) 467
AjnI CCWGG 2 cut(s) 529, 1151
AjuI GAANNNNNNNTTGG 2 cut(s) 1044, 1076
AluBI AGCT 8 cut(s) 25, 440, 572, 648, 669, 901, 1354, 1363
AluI AGCT 8 cut(s) 25, 440, 572, 648, 669, 901, 1354, 1363
Alw21I GWGCWC 3 cut(s) 1231, 1356, 1365
Alw26I GTCTC 2 cut(s) 752, 1440
AlwI GGATC 1 cut(s) 431
AlwNI CAGNNNCTG 1 cut(s) 1163
Ama87I CYCGRG 1 cut(s) 1439
AoxI GGCC 3 cut(s) 739, 1083, 1154
ApeKI GCWGC 2 cut(s) 22, 401
ApoI RAATTY 2 cut(s) 212, 1304
AspS9I GGNCC 2 cut(s) 740, 1083
AsuHPI GGTGA 4 cut(s) 605, 871, 1141, 1204
AvaI CYCGRG 1 cut(s) 1439
BalI TGGCCA 1 cut(s) 1156
BanII GRGCYC 3 cut(s) 1048, 1356, 1365
BbrPI CACGTG 1 cut(s) 104
BbsI GAAGAC 2 cut(s) 527, 1122
Bbv12I GWGCWC 3 cut(s) 1231, 1356, 1365
BbvI GCAGC 2 cut(s) 34, 388
BccI CCATC 3 cut(s) 226, 311, 1379
BceAI ACGGC 1 cut(s) 510
BciT130I CCWGG 2 cut(s) 531, 1153
BclI TGATCA 2 cut(s) 16, 1146
BcoDI GTCTC 2 cut(s) 752, 1440
BcuI ACTAGT 1 cut(s) 467
BfaI CTAG 4 cut(s) 171, 468, 569, 587
BfmI CTRYAG 3 cut(s) 390, 1164, 1284
BfuAI ACCTGC 1 cut(s) 271
BisI GCNGC 2 cut(s) 23, 402
BlsI GCNGC 2 cut(s) 24, 403
BmcAI AGTACT 1 cut(s) 293
Bme1390I CCNGG 2 cut(s) 531, 1153
BmeT110I CYCGRG 1 cut(s) 1439
BmgT120I GGNCC 2 cut(s) 740, 1083
BmiI GGNNCC 3 cut(s) 1047, 1084, 1140
BmrFI CCNGG 2 cut(s) 531, 1153
BmsI GCATC 2 cut(s) 465, 632
BpiI GAAGAC 2 cut(s) 527, 1122
BpuEI CTTGAG 3 cut(s) 39, 944, 1370
BsaAI YACGTR 1 cut(s) 104
BsaJI CCNNGG 3 cut(s) 383, 419, 915
Bsc4I CCNNNNNNNGG 3 cut(s) 280, 411, 1123
Bse1I ACTGG 3 cut(s) 830, 1157, 1171
BseBI CCWGG 2 cut(s) 531, 1153
BseDI CCNNGG 3 cut(s) 383, 419, 915
BseGI GGATG 2 cut(s) 623, 1249
BseLI CCNNNNNNNGG 3 cut(s) 280, 411, 1123
BseMII CTCAG 3 cut(s) 503, 1211, 1369
BseNI ACTGG 3 cut(s) 830, 1157, 1171
BseRI GAGGAG 1 cut(s) 1351
BseXI GCAGC 2 cut(s) 34, 388
BsgI GTGCAG 1 cut(s) 1274
BshFI GGCC 3 cut(s) 741, 1085, 1156
BsiHKAI GWGCWC 3 cut(s) 1231, 1356, 1365
BsiHKCI CYCGRG 1 cut(s) 1439
BslFI GGGAC 1 cut(s) 1038
BslI CCNNNNNNNGG 3 cut(s) 280, 411, 1123
BsmAI GTCTC 2 cut(s) 752, 1440
BsmFI GGGAC 1 cut(s) 1038
BsnI GGCC 3 cut(s) 741, 1085, 1156
BsoBI CYCGRG 1 cut(s) 1439
Bsp1286I GDGCHC 4 cut(s) 1048, 1231, 1356, 1365
Bsp143I GATC 5 cut(s) 16, 423, 546, 697, 1146
BspACI CCGC 2 cut(s) 478, 497
BspANI GGCC 3 cut(s) 741, 1085, 1156
BspCNI CTCAG 3 cut(s) 502, 1210, 1368
BspHI TCATGA 1 cut(s) 1318
BspLI GGNNCC 3 cut(s) 1047, 1084, 1140
BspMAI CTGCAG 1 cut(s) 1168
BspMI ACCTGC 1 cut(s) 271
BspPI GGATC 1 cut(s) 431
BsrI ACTGG 3 cut(s) 830, 1157, 1171
BssECI CCNNGG 3 cut(s) 383, 419, 915
BssMI GATC 5 cut(s) 16, 423, 546, 697, 1146
BssT1I CCWWGG 3 cut(s) 383, 419, 915
Bst2UI CCWGG 2 cut(s) 531, 1153
Bst4CI ACNGT 1 cut(s) 359
Bst6I CTCTTC 2 cut(s) 975, 1268
BstBAI YACGTR 1 cut(s) 104
BstC8I GCNNGC 1 cut(s) 1365
BstDEI CTNAG 5 cut(s) 489, 837, 904, 1197, 1355
BstF5I GGATG 2 cut(s) 623, 1249
BstKTI GATC 5 cut(s) 19, 426, 549, 700, 1149
BstMAI GTCTC 2 cut(s) 752, 1440
BstMBI GATC 5 cut(s) 16, 423, 546, 697, 1146
BstMWI GCNNNNNNNGC 5 cut(s) 926, 1082, 1226, 1360, 1373
BstNI CCWGG 2 cut(s) 531, 1153
BstSCI CCNGG 2 cut(s) 529, 1151
BstSFI CTRYAG 3 cut(s) 390, 1164, 1284
BstV1I GCAGC 2 cut(s) 34, 388
BstV2I GAAGAC 2 cut(s) 527, 1122
BsuRI GGCC 3 cut(s) 741, 1085, 1156
BtsCI GGATG 2 cut(s) 623, 1249
BtsIMutI CAGTG 3 cut(s) 355, 895, 1164
BveI ACCTGC 1 cut(s) 271
Cac8I GCNNGC 1 cut(s) 1365
CaiI CAGNNNCTG 1 cut(s) 1163
CciI TCATGA 1 cut(s) 1318
Cfr13I GGNCC 2 cut(s) 740, 1083
CseI GACGC 1 cut(s) 380
Csp6I GTAC 3 cut(s) 292, 481, 809
CviAII CATG 7 cut(s) 49, 434, 729, 812, 1070, 1309, 1319
CviQI GTAC 3 cut(s) 292, 481, 809
DdeI CTNAG 5 cut(s) 489, 837, 904, 1197, 1355
DpnI GATC 5 cut(s) 18, 425, 548, 699, 1148
DpnII GATC 5 cut(s) 16, 423, 546, 697, 1146
DraI TTTAAA 1 cut(s) 190
DraIII CACNNNGTG 1 cut(s) 107
EaeI YGGCCR 1 cut(s) 1154
Eam1104I CTCTTC 2 cut(s) 975, 1268
EarI CTCTTC 2 cut(s) 975, 1268
Ecl136II GAGCTC 2 cut(s) 1354, 1363
Eco130I CCWWGG 3 cut(s) 383, 419, 915
Eco24I GRGCYC 3 cut(s) 1048, 1356, 1365
Eco53kI GAGCTC 2 cut(s) 1354, 1363
Eco57I CTGAAG 2 cut(s) 246, 261
Eco72I CACGTG 1 cut(s) 104
Eco88I CYCGRG 1 cut(s) 1439
EcoICRI GAGCTC 2 cut(s) 1354, 1363
EcoO109I RGGNCCY 1 cut(s) 1083
EcoRI GAATTC 1 cut(s) 1304
EcoRII CCWGG 2 cut(s) 529, 1151
EcoT14I CCWWGG 3 cut(s) 383, 419, 915
EcoT38I GRGCYC 3 cut(s) 1048, 1356, 1365
ErhI CCWWGG 3 cut(s) 383, 419, 915
FaeI CATG 7 cut(s) 52, 437, 732, 815, 1073, 1312, 1322
FaqI GGGAC 1 cut(s) 1038
FatI CATG 7 cut(s) 48, 433, 728, 811, 1069, 1308, 1318
FbaI TGATCA 2 cut(s) 16, 1146
Fnu4HI GCNGC 2 cut(s) 23, 402
FokI GGATG 2 cut(s) 610, 1256
FriOI GRGCYC 3 cut(s) 1048, 1356, 1365
Fsp4HI GCNGC 2 cut(s) 23, 402
FspBI CTAG 4 cut(s) 171, 468, 569, 587
GluI GCNGC 2 cut(s) 23, 402
HaeIII GGCC 3 cut(s) 741, 1085, 1156
HgaI GACGC 1 cut(s) 380
Hin1II CATG 7 cut(s) 52, 437, 732, 815, 1073, 1312, 1322
HincII GTYRAC 1 cut(s) 664
HindII GTYRAC 1 cut(s) 664
HinfI GANTC 6 cut(s) 415, 509, 515, 596, 1060, 1195
HpaI GTTAAC 1 cut(s) 664
HphI GGTGA 4 cut(s) 605, 871, 1141, 1204
Hpy166II GTNNAC 1 cut(s) 664
Hpy188I TCNGA 7 cut(s) 492, 508, 514, 601, 1200, 1358, 1405
Hpy188III TCNNGA 8 cut(s) 539, 550, 587, 923, 933, 1319, 1349, 1446
Hpy8I GTNNAC 1 cut(s) 664
HpyAV CCTTC 8 cut(s) 50, 236, 703, 780, 785, 989, 1115, 1285
HpyCH4III ACNGT 1 cut(s) 359
HpyCH4IV ACGT 1 cut(s) 103
HpyCH4V TGCA 5 cut(s) 143, 368, 695, 1166, 1255
HpyF10VI GCNNNNNNNGC 5 cut(s) 926, 1082, 1226, 1360, 1373
HpyF3I CTNAG 5 cut(s) 489, 837, 904, 1197, 1355
HpySE526I ACGT 1 cut(s) 103
Hsp92II CATG 7 cut(s) 52, 437, 732, 815, 1073, 1312, 1322
Ksp22I TGATCA 2 cut(s) 16, 1146
KspAI GTTAAC 1 cut(s) 664
Kzo9I GATC 5 cut(s) 16, 423, 546, 697, 1146
LmnI GCTCC 4 cut(s) 437, 577, 1051, 1338
Lsp1109I GCAGC 2 cut(s) 34, 388
LweI GCATC 2 cut(s) 465, 632
MaeI CTAG 4 cut(s) 171, 468, 569, 587
MaeII ACGT 1 cut(s) 103
MaeIII GTNAC 4 cut(s) 59, 1090, 1192, 1297
MalI GATC 5 cut(s) 18, 425, 548, 699, 1148
MboI GATC 5 cut(s) 16, 423, 546, 697, 1146
MboII GAAGA 8 cut(s) 28, 527, 970, 992, 1055, 1122, 1285, 1394
MhlI GDGCHC 4 cut(s) 1048, 1231, 1356, 1365
MlsI TGGCCA 1 cut(s) 1156
MluNI TGGCCA 1 cut(s) 1156
MlyI GAGTC 2 cut(s) 605, 1189
Mox20I TGGCCA 1 cut(s) 1156
MscI TGGCCA 1 cut(s) 1156
MseI TTAA 5 cut(s) 122, 189, 663, 831, 1409
Msp20I TGGCCA 1 cut(s) 1156
MspR9I CCNGG 2 cut(s) 531, 1153
MvaI CCWGG 2 cut(s) 531, 1153
MwoI GCNNNNNNNGC 5 cut(s) 926, 1082, 1226, 1360, 1373
NdeII GATC 5 cut(s) 16, 423, 546, 697, 1146
NlaIII CATG 7 cut(s) 52, 437, 732, 815, 1073, 1312, 1322
NlaIV GGNNCC 3 cut(s) 1047, 1084, 1140
NmuCI GTSAC 4 cut(s) 59, 1090, 1192, 1297
PagI TCATGA 1 cut(s) 1318
PaqCI CACCTGC 1 cut(s) 271
PfeI GAWTC 4 cut(s) 415, 509, 515, 1060
PkrI GCNGC 2 cut(s) 24, 403
PleI GAGTC 2 cut(s) 604, 1189
PmaCI CACGTG 1 cut(s) 104
PmlI CACGTG 1 cut(s) 104
PpsI GAGTC 2 cut(s) 604, 1189
Ppu21I YACGTR 1 cut(s) 104
PsiI TTATAA 1 cut(s) 1034
Psp124BI GAGCTC 2 cut(s) 1356, 1365
Psp6I CCWGG 2 cut(s) 529, 1151
PspCI CACGTG 1 cut(s) 104
PspGI CCWGG 2 cut(s) 529, 1151
PspN4I GGNNCC 3 cut(s) 1047, 1084, 1140
PspPI GGNCC 2 cut(s) 740, 1083
PstI CTGCAG 1 cut(s) 1168
PstNI CAGNNNCTG 1 cut(s) 1163
RsaI GTAC 3 cut(s) 293, 482, 810
RsaNI GTAC 3 cut(s) 292, 481, 809
SacI GAGCTC 2 cut(s) 1356, 1365
SaqAI TTAA 5 cut(s) 122, 189, 663, 831, 1409
SatI GCNGC 2 cut(s) 23, 402
Sau3AI GATC 5 cut(s) 16, 423, 546, 697, 1146
Sau96I GGNCC 2 cut(s) 740, 1083
ScaI AGTACT 1 cut(s) 293
SchI GAGTC 2 cut(s) 605, 1189
ScrFI CCNGG 2 cut(s) 531, 1153
SduI GDGCHC 4 cut(s) 1048, 1231, 1356, 1365
SfaNI GCATC 2 cut(s) 465, 632
SfcI CTRYAG 3 cut(s) 390, 1164, 1284
SmlI CTYRAG 3 cut(s) 54, 923, 1349
SmoI CTYRAG 3 cut(s) 54, 923, 1349
SpeI ACTAGT 1 cut(s) 467
SsiI CCGC 2 cut(s) 478, 497
SspMI CTAG 4 cut(s) 171, 468, 569, 587
SstI GAGCTC 2 cut(s) 1356, 1365
StyD4I CCNGG 2 cut(s) 529, 1151
StyI CCWWGG 3 cut(s) 383, 419, 915
TaaI ACNGT 1 cut(s) 359
TaiI ACGT 1 cut(s) 106
TaqI TCGA 1 cut(s) 934
TaqII GACCGA 1 cut(s) 1304
TatI WGTACW 2 cut(s) 291, 808
TfiI GAWTC 4 cut(s) 415, 509, 515, 1060
Tru1I TTAA 5 cut(s) 122, 189, 663, 831, 1409
Tru9I TTAA 5 cut(s) 122, 189, 663, 831, 1409
TscAI CASTG 3 cut(s) 362, 895, 1164
TseFI GTSAC 4 cut(s) 59, 1090, 1192, 1297
TseI GCWGC 2 cut(s) 22, 401
Tsp45I GTSAC 4 cut(s) 59, 1090, 1192, 1297
TspRI CASTG 3 cut(s) 362, 895, 1164
XapI RAATTY 2 cut(s) 212, 1304
XbaI TCTAGA 1 cut(s) 586
XcmI CCANNNNNNNNNTGG 1 cut(s) 1149
XspI CTAG 4 cut(s) 171, 468, 569, 587
ZrmI AGTACT 1 cut(s) 293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.