Rorug05G0563700

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
75526558 .. 75529327
2770 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0563700.1

Sequence Viewer

Length: 732 bp
ATGTCTTTTCCCACTGCCAAGTCGCCGTTCACTGGATTTGCTCCACCGCCAAGTCGCCGGCCGCGTATCTCCCACCACCACCACGTTCTCTGCTCCTCTCATCGAGATGTCGTGGATCGATTGAGCTACGAATTAAAGAACATTGAAGTGGTTGCCGCTCTCGGAGATTGGGGCCACCGGTTTCAGGGTCTTGAAGTTTCTGAAACCCTTTTGGAGAAAGTTGAGAACTTTGGCCGTCTTGCTCATTGGTTTTTTTCTCTGGCCAAATCAAGGTACAATTTTATTCACTCACACTGTTGTGGAGCCCATAGTTCCAGTTATTTTTCAACACACAAAGGCAACCACTTCCATATAGAGAAACAGGCAGTGGGATCCATTATTGTCAGACATTTGGACTATAGATTTGCTGTAGACCCCAATGGTGGTATTCCTAATAATCATCAACCGAATGGGCCTTCTGAAGTATGCGAACCAACAGAGAGTCCTCTACGTTATGGAATTTGTGATGATTGTATCAACCACCACCTTTCAAGTGGCCATGCTGGTCATAGTAATGGGGTTTCAGTTCCAGCTGGAAACCTGGGAATTCCTATCGCTGATGTTAATGCCATTCCCAGTGATTTCATAATTCCTCTTGCCGGTTTTGATGGTGTACAGAATGACATAAGAATGCCAACGACCACCTATACAAATGAGCAGCAAATCATCGTCGTGAGTGCTACATCCATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

243

Amino Acids

26.78

Weight (kDa)

6.53

Isoelectric Point (pI)

37.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 158
AccI GTMKAC 1 cut(s) 411
AccII CGCG 1 cut(s) 64
AciI CCGC 3 cut(s) 47, 62, 156
AclWI GGATC 3 cut(s) 123, 366, 379
AcoI YGGCCR 4 cut(s) 59, 232, 261, 535
AcsI RAATTY 2 cut(s) 498, 585
AcuI CTGAAG 1 cut(s) 480
AfaI GTAC 2 cut(s) 275, 654
AfiI CCNNNNNNNGG 5 cut(s) 32, 184, 270, 422, 638
AgeI ACCGGT 1 cut(s) 177
AgsI TTSAA 4 cut(s) 146, 194, 327, 531
AjnI CCWGG 1 cut(s) 579
AjuI GAANNNNNNNTTGG 2 cut(s) 11, 43
AleI CACNNNNGTG 1 cut(s) 297
AluBI AGCT 2 cut(s) 126, 572
AluI AGCT 2 cut(s) 126, 572
AlwI GGATC 3 cut(s) 123, 366, 379
AoxI GGCC 6 cut(s) 59, 172, 232, 261, 452, 535
ApeKI GCWGC 1 cut(s) 697
ApoI RAATTY 2 cut(s) 498, 585
ArsI GACNNNNNNTTYG 2 cut(s) 386, 418
AsiGI ACCGGT 1 cut(s) 177
AspS9I GGNCC 2 cut(s) 172, 452
BalI TGGCCA 2 cut(s) 263, 537
BamHI GGATCC 1 cut(s) 371
BanII GRGCYC 1 cut(s) 307
BbvI GCAGC 1 cut(s) 709
BccI CCATC 1 cut(s) 641
BceAI ACGGC 2 cut(s) 10, 219
BciT130I CCWGG 1 cut(s) 581
BfmI CTRYAG 2 cut(s) 397, 408
BisI GCNGC 3 cut(s) 62, 156, 698
BlsI GCNGC 3 cut(s) 63, 157, 699
Bme1390I CCNGG 1 cut(s) 581
BmgT120I GGNCC 2 cut(s) 172, 452
BmiI GGNNCC 3 cut(s) 173, 304, 373
BmrFI CCNGG 1 cut(s) 581
BmrI ACTGGG 1 cut(s) 609
BmuI ACTGGG 1 cut(s) 609
Bsa29I ATCGAT 1 cut(s) 118
BsaJI CCNNGG 1 cut(s) 580
BsaWI WCCGGW 1 cut(s) 177
Bsc4I CCNNNNNNNGG 5 cut(s) 32, 184, 270, 422, 638
Bse118I RCCGGY 3 cut(s) 57, 177, 638
Bse1I ACTGG 3 cut(s) 37, 315, 615
BseBI CCWGG 1 cut(s) 581
BseCI ATCGAT 1 cut(s) 118
BseDI CCNNGG 1 cut(s) 580
BseGI GGATG 1 cut(s) 722
BseLI CCNNNNNNNGG 5 cut(s) 32, 184, 270, 422, 638
BseNI ACTGG 3 cut(s) 37, 315, 615
BseRI GAGGAG 1 cut(s) 85
BseX3I CGGCCG 1 cut(s) 59
BseXI GCAGC 1 cut(s) 709
Bsh1236I CGCG 1 cut(s) 64
Bsh1285I CGRYCG 1 cut(s) 62
BshFI GGCC 6 cut(s) 61, 174, 234, 263, 454, 537
BshTI ACCGGT 1 cut(s) 177
BshVI ATCGAT 1 cut(s) 118
BsiEI CGRYCG 1 cut(s) 62
BsiSI CCGG 3 cut(s) 58, 178, 639
BslI CCNNNNNNNGG 5 cut(s) 32, 184, 270, 422, 638
BsmI GAATGC 1 cut(s) 675
BsnI GGCC 6 cut(s) 61, 174, 234, 263, 454, 537
Bsp1286I GDGCHC 1 cut(s) 307
Bsp1407I TGTACA 1 cut(s) 652
Bsp143I GATC 2 cut(s) 115, 371
BspACI CCGC 3 cut(s) 47, 62, 156
BspANI GGCC 6 cut(s) 61, 174, 234, 263, 454, 537
BspDI ATCGAT 1 cut(s) 118
BspFNI CGCG 1 cut(s) 64
BspLI GGNNCC 3 cut(s) 173, 304, 373
BspPI GGATC 3 cut(s) 123, 366, 379
BsrBI CCGCTC 1 cut(s) 158
BsrFI RCCGGY 3 cut(s) 57, 177, 638
BsrGI TGTACA 1 cut(s) 652
BsrI ACTGG 3 cut(s) 37, 315, 615
BssAI RCCGGY 3 cut(s) 57, 177, 638
BssECI CCNNGG 1 cut(s) 580
BssMI GATC 2 cut(s) 115, 371
Bst2UI CCWGG 1 cut(s) 581
Bst4CI ACNGT 1 cut(s) 296
BstAUI TGTACA 1 cut(s) 652
BstC8I GCNNGC 1 cut(s) 59
BstF5I GGATG 1 cut(s) 722
BstFNI CGCG 1 cut(s) 64
BstKTI GATC 2 cut(s) 118, 374
BstMBI GATC 2 cut(s) 115, 371
BstMCI CGRYCG 1 cut(s) 62
BstNI CCWGG 1 cut(s) 581
BstSCI CCNGG 1 cut(s) 579
BstSFI CTRYAG 2 cut(s) 397, 408
BstUI CGCG 1 cut(s) 64
BstV1I GCAGC 1 cut(s) 709
BstX2I RGATCY 1 cut(s) 371
BstYI RGATCY 1 cut(s) 371
BstZI CGGCCG 1 cut(s) 59
Bsu15I ATCGAT 1 cut(s) 118
BsuRI GGCC 6 cut(s) 61, 174, 234, 263, 454, 537
BsuTUI ATCGAT 1 cut(s) 118
BtsCI GGATG 1 cut(s) 722
BtsI GCAGTG 2 cut(s) 12, 372
BtsIMutI CAGTG 5 cut(s) 12, 30, 292, 372, 622
Cac8I GCNNGC 1 cut(s) 59
Cfr10I RCCGGY 3 cut(s) 57, 177, 638
Cfr13I GGNCC 2 cut(s) 172, 452
ClaI ATCGAT 1 cut(s) 118
Csp6I GTAC 2 cut(s) 274, 653
CspAI ACCGGT 1 cut(s) 177
CviAII CATG 2 cut(s) 539, 727
CviJI RGCY 9 cut(s) 61, 126, 174, 234, 263, 305, 454, 537, 572
CviKI_1 RGCY 9 cut(s) 61, 126, 174, 234, 263, 305, 454, 537, 572
CviQI GTAC 2 cut(s) 274, 653
DpnI GATC 2 cut(s) 117, 373
DpnII GATC 2 cut(s) 115, 371
EaeI YGGCCR 4 cut(s) 59, 232, 261, 535
EagI CGGCCG 1 cut(s) 59
EclXI CGGCCG 1 cut(s) 59
Eco24I GRGCYC 1 cut(s) 307
Eco52I CGGCCG 1 cut(s) 59
Eco57I CTGAAG 1 cut(s) 480
EcoRI GAATTC 1 cut(s) 585
EcoRII CCWGG 1 cut(s) 579
EcoT38I GRGCYC 1 cut(s) 307
FaeI CATG 2 cut(s) 542, 730
FatI CATG 2 cut(s) 538, 726
FblI GTMKAC 1 cut(s) 411
Fnu4HI GCNGC 3 cut(s) 62, 156, 698
FokI GGATG 1 cut(s) 709
FriOI GRGCYC 1 cut(s) 307
Fsp4HI GCNGC 3 cut(s) 62, 156, 698
GluI GCNGC 3 cut(s) 62, 156, 698
HaeIII GGCC 6 cut(s) 61, 174, 234, 263, 454, 537
HapII CCGG 3 cut(s) 58, 178, 639
Hin1II CATG 2 cut(s) 542, 730
HinfI GANTC 1 cut(s) 481
HpaII CCGG 3 cut(s) 58, 178, 639
Hpy166II GTNNAC 3 cut(s) 30, 412, 653
Hpy188I TCNGA 4 cut(s) 164, 202, 386, 460
Hpy188III TCNNGA 3 cut(s) 104, 191, 712
Hpy8I GTNNAC 3 cut(s) 30, 412, 653
Hpy99I CGWCG 1 cut(s) 713
HpyAV CCTTC 1 cut(s) 465
HpyCH4III ACNGT 1 cut(s) 296
HpyCH4IV ACGT 2 cut(s) 84, 490
HpySE526I ACGT 2 cut(s) 84, 490
Hsp92II CATG 2 cut(s) 542, 730
KroI GCCGGC 1 cut(s) 57
KroNI GCCGGC 1 cut(s) 59
Kzo9I GATC 2 cut(s) 115, 371
LmnI GCTCC 3 cut(s) 46, 98, 302
Lsp1109I GCAGC 1 cut(s) 709
MaeII ACGT 2 cut(s) 84, 490
MalI GATC 2 cut(s) 117, 373
MbiI CCGCTC 1 cut(s) 158
MboI GATC 2 cut(s) 115, 371
MflI RGATCY 1 cut(s) 371
MhlI GDGCHC 1 cut(s) 307
MlsI TGGCCA 2 cut(s) 263, 537
MluCI AATT 5 cut(s) 131, 277, 498, 585, 627
MluNI TGGCCA 2 cut(s) 263, 537
MlyI GAGTC 1 cut(s) 490
MnlI CCTC 3 cut(s) 106, 495, 642
Mox20I TGGCCA 2 cut(s) 263, 537
MroNI GCCGGC 1 cut(s) 57
MscI TGGCCA 2 cut(s) 263, 537
MseI TTAA 2 cut(s) 134, 603
MslI CAYNNNNRTG 6 cut(s) 105, 146, 297, 552, 668, 710
Msp20I TGGCCA 2 cut(s) 263, 537
MspA1I CMGCKG 1 cut(s) 572
MspI CCGG 3 cut(s) 58, 178, 639
MspR9I CCNGG 1 cut(s) 581
Mva1269I GAATGC 1 cut(s) 675
MvaI CCWGG 1 cut(s) 581
MvnI CGCG 1 cut(s) 64
NaeI GCCGGC 1 cut(s) 59
NdeII GATC 2 cut(s) 115, 371
NgoMIV GCCGGC 1 cut(s) 57
NlaIII CATG 2 cut(s) 542, 730
NlaIV GGNNCC 3 cut(s) 173, 304, 373
OliI CACNNNNGTG 1 cut(s) 297
PcsI WCGNNNNNNNCGW 1 cut(s) 61
PctI GAATGC 1 cut(s) 675
PdiI GCCGGC 1 cut(s) 59
PinAI ACCGGT 1 cut(s) 177
PkrI GCNGC 3 cut(s) 63, 157, 699
PleI GAGTC 1 cut(s) 489
PpsI GAGTC 1 cut(s) 489
Psp6I CCWGG 1 cut(s) 579
PspGI CCWGG 1 cut(s) 579
PspN4I GGNNCC 3 cut(s) 173, 304, 373
PspPI GGNCC 2 cut(s) 172, 452
PsuI RGATCY 1 cut(s) 371
PvuII CAGCTG 1 cut(s) 572
RsaI GTAC 2 cut(s) 275, 654
RsaNI GTAC 2 cut(s) 274, 653
RseI CAYNNNNRTG 6 cut(s) 105, 146, 297, 552, 668, 710
SaqAI TTAA 2 cut(s) 134, 603
SatI GCNGC 3 cut(s) 62, 156, 698
Sau3AI GATC 2 cut(s) 115, 371
Sau96I GGNCC 2 cut(s) 172, 452
SchI GAGTC 1 cut(s) 490
ScrFI CCNGG 1 cut(s) 581
SduI GDGCHC 1 cut(s) 307
SetI ASST 8 cut(s) 87, 128, 275, 493, 528, 574, 582, 686
SfcI CTRYAG 2 cut(s) 397, 408
SmiMI CAYNNNNRTG 6 cut(s) 105, 146, 297, 552, 668, 710
Sse9I AATT 5 cut(s) 131, 277, 498, 585, 627
SsiI CCGC 3 cut(s) 47, 62, 156
StyD4I CCNGG 1 cut(s) 579
TaaI ACNGT 1 cut(s) 296
TaiI ACGT 2 cut(s) 87, 493
TaqI TCGA 2 cut(s) 103, 118
TasI AATT 5 cut(s) 131, 277, 498, 585, 627
TatI WGTACW 1 cut(s) 652
TauI GCSGC 2 cut(s) 64, 158
Tru1I TTAA 2 cut(s) 134, 603
Tru9I TTAA 2 cut(s) 134, 603
TscAI CASTG 5 cut(s) 19, 37, 299, 372, 622
TseI GCWGC 1 cut(s) 697
TspDTI ATGAA 1 cut(s) 613
TspRI CASTG 5 cut(s) 19, 37, 299, 372, 622
XapI RAATTY 2 cut(s) 498, 585
XcmI CCANNNNNNNNNTGG 1 cut(s) 530
XmiI GTMKAC 1 cut(s) 411
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.